Hdys019673.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995303.1:1296539-1298443[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-09 8.7e-07 29.6 0.0 1 38 18 56 18 61 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGCACCTATAAAAAGACCGCGGGTACCCgcaattataaaaattacacaGAGGAGGCAATGGAagaagcaatagaaaaaatcaCAAACAGCGAATTGTCTATTAATGCTGCTTCACTTCTTTATAAAATTCCGTTTGGGacactttataataaatataaaggatTACACGGAAGGACACCTGGTGCCCAACCAGTTTTCATGCACAATGAAGAAATCGCAATATTACGTGCTGCGGCTACATGCGGTGATTGGGGTTTTCCTCTTACTTTGTTAGACCTTAGAATGTTTGCAAAGGCTTATTTGGATAAACAGGGGAAGGTGGTAGAACGGTTTACAAATAACTTACCAGGAGTCGAATGGGCCGTTAGCGTTCTGAAGCGCCATAAAAACGCCTATGGTCAAAGGCTTTCAACTAATATTAAAAGGTCTAGAGCGACGGTGGGCCGGGAATCACTAAATAGATATTTCGACAACCTTCACTCTGAGTTAGAAAATGTCCCACCGTCTAATATATTCAACTATGACGAATCTAATATGGCTGATGATCCGGGGAAAAAAAGATGTGTTTATAGAAGAGGAGTAAAATATCCTGAAAAAGTGATGAACTTTTCGAAGAGTTCCACTACAATTATGGTTTGTGGTTCTGCAGATGGCACATTATTGCCGccatatattatttacaaaagtaCCCACCTGTATGATACATGGAAGGAAAGAGGTATTGTTGGTAAACCATGCTGTGAAGAGCCATGTTGCAGCCGGGGATGCCGCTACAACAGAACAAGTAGTGGTTGGATAGATACACCAACGTTTAGAGATTGGTTCATGACTTGTTTTTTACCCCATGCCAAAAGACTTGAAGGGAAAAAGGTGTTAATCGGAGATAATCTATCTTCTCATATTGACAACGATGTTATAGCGACATGTGAAACAAATAACATCAGTTTTATATGTTTGGTGCCTAACTCAACCCATTTAACCCAGCCGCTTGACGTTGGCTTTTTCCGTCCGTTAAAAATAGCATGGCGACAAACTCTTGAAGAgtggaaaaaagccaatttacgAACTACATCAGTACCTAAGGAGTCCTTCCCATATCTGTTGAAACAGGCAATTATGAATATGGACCGAAAACCACCAAAAAATGATAAAGACGCCTGTGAGGAGTCGTCAGCTGTAAAAAGAAATTTGGTAAGCAGTTTTAAGGCTACTGGTATCGCTCCTCTTGATAGAAACAGGGTTTTAAGTAAATTGCCACCTGACTCACCTTCTCCTGAAATGGAAACTGTCATTCGAGATTCCTTAACAGAGTTTTTAAGAGAACAGAGATTTGGAAATGAATCACAGCCGCCAAGGAAGAGGACAAGACTGCAAATTGAACCCGGCAAAAGTATCTCAACAGTAGATGAACCATCGAATCAAGAAGTTGATGTTGTTGAGCAACACACATTGGATCCAAATGATTGTCCTGCACAAGCGCGAAGCTCTGTTCCTTTTATCAGCGAGCCATCTACAAGCTACCAAACTGGTCAAGAGGACAACAATCATGATATTACCGATTGCGATTCAGATACTGAAAATATAGTACCGAATGCTGCTAGAAATACTTTaagcgatttcaaaaaaatcccCACAATAGGCCaatttattttagcaaaatTTGGATCACAGAAGGGGAAAAAGACCTATCATTATGTGTGTTCTATTGAAGATATCATTGGAACTAAACTGATTGTTCAAGGTTATAAgtcccaaaaaaaaaccaaaactgtTTTTAAGGAAGTTCCCAAAGATGTATCAATTATTGAAGAAAGTGACATTGTTACTTACCTTCCTAAACCGAAATACACCAACGGATGCTACTCGTTCCCAAATGACGTGATGGTTAAAGAATTATAG
- Protein Sequence
- MVRTYKKTAGTRNYKNYTEEAMEEAIEKITNSELSINAASLLYKIPFGTLYNKYKGLHGRTPGAQPVFMHNEEIAILRAAATCGDWGFPLTLLDLRMFAKAYLDKQGKVVERFTNNLPGVEWAVSVLKRHKNAYGQRLSTNIKRSRATVGRESLNRYFDNLHSELENVPPSNIFNYDESNMADDPGKKRCVYRRGVKYPEKVMNFSKSSTTIMVCGSADGTLLPPYIIYKSTHLYDTWKERGIVGKPCCEEPCCSRGCRYNRTSSGWIDTPTFRDWFMTCFLPHAKRLEGKKVLIGDNLSSHIDNDVIATCETNNISFICLVPNSTHLTQPLDVGFFRPLKIAWRQTLEEWKKANLRTTSVPKESFPYLLKQAIMNMDRKPPKNDKDACEESSAVKRNLVSSFKATGIAPLDRNRVLSKLPPDSPSPEMETVIRDSLTEFLREQRFGNESQPPRKRTRLQIEPGKSISTVDEPSNQEVDVVEQHTLDPNDCPAQARSSVPFISEPSTSYQTGQEDNNHDITDCDSDTENIVPNAARNTLSDFKKIPTIGQFILAKFGSQKGKKTYHYVCSIEDIIGTKLIVQGYKSQKKTKTVFKEVPKDVSIIEESDIVTYLPKPKYTNGCYSFPNDVMVKEL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745599;
- 90% Identity
- iTF_01439852; iTF_01026038; iTF_01533866; iTF_00071345; iTF_00071346; iTF_01026034; iTF_01026039; iTF_01026040; iTF_00171694; iTF_00172758; iTF_00667364; iTF_00122313; iTF_00122314; iTF_00667338; iTF_00850637; iTF_00850638; iTF_01367744; iTF_01367743; iTF_00771831;
- 80% Identity
- -