Pgla053778.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius glacialis
Gene Symbol
-
Assembly
GCA_033319125.1
Location
JAVANC010000025.1:28220857-28222788[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-09 9.1e-07 30.4 0.0 1 38 18 56 18 61 0.92

Sequence Information

Coding Sequence
ATGGTTCGTACGTATAAAAAGACAGCGGGTACCCGCAATTACAAAAATTATACAGAGGAGATAATGGAAGAAGCAATAGAGAAAATCACCAACGACGAATTGTCTATTAATGCTGCTTCACTTCAATATAAAATTCCGTATGGAacactttataataaatataaaggaTTACACGGAAAAACGCCTGGTGGCCAACCTGTTTTCACGCATCAAGAGGAATTAGCAATTTTACGAGCTGCGGCTACATGTGGTGATTGGGGGTTTCCTCTTACATTGTTTGACCTTCGAATGTTCGCTAAGGCTCATTTAGATCGACAGGGAAAGATTATAGAACGGTTTTCAAATAACCTGCCTGGTGTCGAATGGGCCATTAGTGTCCTGAAGCGTCATAAGCACTCCTATGGTCAAAGACTATCCACTAATATCAAAAGGTCCAGAGCGACTGTCGGCCGGGAGTCATTAAATAAGTATTTCGACAACCTTCACTCTGAGATAGAAAATGTACCACCGTCCAATATATTTAACTATGACGAATCAAATATGGCAGACGATCCTggcaaaaaaaaatgtgtatataGAAGAGGAGTAAAATACCCTGAGAAAGTAATGAACTATTCGAAGAGTTCTACTACAGTTATGATTTGTGGTTCTGCAGACGGCACATTATTGCCGCCATATATAATTTACAAAAGTACTCACCTGTACGATACATGGCAAGAGAGAGGTATTGTAGGTAAACCATGCTGTGAAAAGCCATGCTGTAGCCGGGGATGTCGGTATAATAGAACAACTAGTGGATGGATAGACACACCAACATTTAGGGATTGGTTCATGACTTGTTTTTTGCCTCATGCCAAAAGACTAGACGGGAAAAAGGTGTTGATAGGTGATAATCTATCGTCTCACATTGACAACGATGTATTAGTTGCATGTGAAATAAATAACATCAGTTTTATATGTTTGGTGCCAAATTCAACCCATCTAACCCAGCCACTCGATGTCGGCTTCTTTCGTCCTTTAAAGATTGCATGGCGACAAACGCTTGAAGACTGGAAAAAAGCCAATTTACGAACTATATCTATACCTAAGGAGTCCTTCCCACATCTGTTGAAAAAGACAATAATTAATATGGACCAAAAGCCACCAAAAAATGATAAAGAGGCTTGCACAGAATTGTCAGCTGTGAAAAGAAATTTGGTGAGCAGTTTTAGGGCTACTGGTATCTCTCCTTTTGATAGGAACAGGGTGTTAAACAAATTGCCACTTGAGTCGCCTTCTCCTGAAATCGAAACTGGCGTTCGAGATTCCTTAACAGAGTTTTTAAGAGAACAAAGATTTAGGAATGAATCACAGCCACCAAGGAAGAGGACCAGACTACAAATTGAACCTGGTAAAAGTATATCGACACTTAATGAAACATCTTGCCCCACAAATCAAGAAGTTGATGTAGTTGAGGTCCAACACACCTCAGAGCGAAATGATAATCGCATACAAACTGAATCAATATCGATGCAAATTCCTCTTTCTGTTATCAGCGAGCCATCCACAAGCTATAGAACTGGTTACGAGGACACCAATGATAATATTACCGATTGTGAGTCTGATAATGAAAATATAGCACCGAATTATACTAGAAATACCTCAACAGATTTGGCACAAAATCCCGCAATAGGGCAGTTTATTTTAGCAAGGTTTGGATCACAAAAGGGAAAAAAGACATATCATTATGTATGTTCTATTGAAGATATCATTGACACTAAACTTGTTGTTCAAGGTTATAAGTcccaaaaaaaaaccaaaactatTTTTAAGGAAGTTCCTAAAGATTTATCAATTATAGAAATTAGTGACATTATTACTTACCTGCCTAAACCGAAATATATCAATGAATGCTACTCGTTCCCCAATGATGTGATGATCAAAGAATTGTAG
Protein Sequence
MVRTYKKTAGTRNYKNYTEEIMEEAIEKITNDELSINAASLQYKIPYGTLYNKYKGLHGKTPGGQPVFTHQEELAILRAAATCGDWGFPLTLFDLRMFAKAHLDRQGKIIERFSNNLPGVEWAISVLKRHKHSYGQRLSTNIKRSRATVGRESLNKYFDNLHSEIENVPPSNIFNYDESNMADDPGKKKCVYRRGVKYPEKVMNYSKSSTTVMICGSADGTLLPPYIIYKSTHLYDTWQERGIVGKPCCEKPCCSRGCRYNRTTSGWIDTPTFRDWFMTCFLPHAKRLDGKKVLIGDNLSSHIDNDVLVACEINNISFICLVPNSTHLTQPLDVGFFRPLKIAWRQTLEDWKKANLRTISIPKESFPHLLKKTIINMDQKPPKNDKEACTELSAVKRNLVSSFRATGISPFDRNRVLNKLPLESPSPEIETGVRDSLTEFLREQRFRNESQPPRKRTRLQIEPGKSISTLNETSCPTNQEVDVVEVQHTSERNDNRIQTESISMQIPLSVISEPSTSYRTGYEDTNDNITDCESDNENIAPNYTRNTSTDLAQNPAIGQFILARFGSQKGKKTYHYVCSIEDIIDTKLVVQGYKSQKKTKTIFKEVPKDLSIIEISDIITYLPKPKYINECYSFPNDVMIKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00745599;
90% Identity
iTF_01156264;
80% Identity
iTF_01155037;