Xsex021303.1
Basic Information
- Insect
- Xestia sexstrigata
- Gene Symbol
- -
- Assembly
- GCA_941918865.2
- Location
- CALNXB020000431.1:129975-131909[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-10 5.2e-07 29.8 0.0 1 38 18 56 18 61 0.91 2 2 2.3 1.5e+03 -0.4 0.4 12 21 496 505 495 506 0.92
Sequence Information
- Coding Sequence
- ATGGTTCGCACCTATAAAAAGACCGCGGGTACCCGCAATTATAAAAATTACACAGAGGAGGCAATGGAAGAAGCAATAGAAAAAATTACAAATAGCGAATTGTCTATAAATGCTGCTTCACTTCTTTAtaaaattccgtttgggacactttataataaatataaaggattacacgaaaggacgcctggtgcccaaccagttttcatgcacaatgaagaaatcgcaatattacgtgctgcggctacatgtggtgattggggttttcctcttactttgttagaccttagaatgtttgcaaaggcttatttagataaacaggggaagacagtagaacggtttacaaataacctaccaggtgtcgaatgggcaattagcgttttgaagcgccataaaaacgcctatggtcaaagactatcaactaatattaaaaggtctagagcgactgtgggccgggaatcactaaatagatatttcgacaaccttcactctgaggtagaaaatgtaccaccgtctaatatattcaactatgacgaatctaatatggccgacgatccggggaaaaaaagatgtgtatatagaagaggagtaaaatatcctgagaaagtgatgaacttttcgaagagttctactacagttatgatttgtggttctgcagatggcacattattgccgccatatattatttacaaaagtacccatctttatgatacatggaaggaaagaggtattgttggtaaaccgtgctgtgaagagccatgttgcagccggggatgccgttacaatagaacaactagtggatggattgatacaccaacatttagagattggttcatgacttgttttctacctcatgccaaaagactagaagggaaaaaggtgttaatcggtgataatctatcgtctcatattgacaacgatgttataactacatgtaaaacaaataacatcagttttatatgtttggtgcctaattcaacccatttaacccagccgcttgacgttggctattttcgtccgttaaaaatagcttggagacaaactcttgaagactggaaaAAAGCCAATTTACGAACTACATCTGTACCTAAGGAGTCCTTCCCACATTTGTTGAAAAAGGCAATCATAAATATGGACCGAAAACCACCAAAAAATGATAAAGACGCTTGTACGGAGTTGTCAGCTGTAAAAAGAAATTTGGTGAGCAGTTTTAAGGCTACTGGTATCGCTCCTCTTGATAGAAACAGGGTTTTGAGCAAATTGCCTCCTGAGTCACCTTCTCCTGAAATGGAAACTGTTATCCGAGATTCGTTAACAGAGTTTTTAAGAGAACAAAGATTTGGGAATGAATCACAGCCACCAAGGAAGAGGACAAGACTGCAAATTGAACCCGGTAAAAGTATCTCAACAGTAGATGAACAATCAAATCAAGAAGTTAATGTTGAGCTTGAACACACATTGGATCGAAATGATAGTCCTGATAGTCTTGTACAAACTGGAACAATGTCTATGCAACAATCGATGCAAAATCCTGTTATCAGCGAGCCATCTACAAGCTATCAAACTGGTCAAGAGGACAACAATCATGATATTACCGATTGCGATTCAGATACTGAAAATATAGTGCCAAATCACGCTAGAAATACTTTAAGCGATTTCACACAGCTTCCCACAATAGGACAATTTATTTTAGCAAAATTTGGATTACAGAAGGGGAAAAAGACATATCATTATGTATGTTCTATTGAAGATATCATTGGCACTAAACTGGTTGTCCAAGGTTTTAAGTCCCAAAAAAAAACGAAAACTATTTTTAAGGAAGTTCCCAAAGATGTATCAATCATTGAAGTAAGTGACATTATAACTTATCTTCCCAAACCGAAATACATTAACGAATGCTACTCGTTCCCAAGTGACGTGATGATTAAAGAATTATAG
- Protein Sequence
- MVRTYKKTAGTRNYKNYTEEAMEEAIEKITNSELSINAASLLYKIPFGTLYNKYKGLHERTPGAQPVFMHNEEIAILRAAATCGDWGFPLTLLDLRMFAKAYLDKQGKTVERFTNNLPGVEWAISVLKRHKNAYGQRLSTNIKRSRATVGRESLNRYFDNLHSEVENVPPSNIFNYDESNMADDPGKKRCVYRRGVKYPEKVMNFSKSSTTVMICGSADGTLLPPYIIYKSTHLYDTWKERGIVGKPCCEEPCCSRGCRYNRTTSGWIDTPTFRDWFMTCFLPHAKRLEGKKVLIGDNLSSHIDNDVITTCKTNNISFICLVPNSTHLTQPLDVGYFRPLKIAWRQTLEDWKKANLRTTSVPKESFPHLLKKAIINMDRKPPKNDKDACTELSAVKRNLVSSFKATGIAPLDRNRVLSKLPPESPSPEMETVIRDSLTEFLREQRFGNESQPPRKRTRLQIEPGKSISTVDEQSNQEVNVELEHTLDRNDSPDSLVQTGTMSMQQSMQNPVISEPSTSYQTGQEDNNHDITDCDSDTENIVPNHARNTLSDFTQLPTIGQFILAKFGLQKGKKTYHYVCSIEDIIGTKLVVQGFKSQKKTKTIFKEVPKDVSIIEVSDIITYLPKPKYINECYSFPSDVMIKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745599;
- 90% Identity
- iTF_00771832;
- 80% Identity
- -