Basic Information

Insect: Formica aserva
Gene Symbol: ZNF236
Assembly: GCA_037039905.1
Location: JAXRKO010000009.1:6182500-6196781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 5.6e-05 0.011 17.6 0.8 2 23 186 207 185 207 0.96

2 27 0.00016 0.031 16.2 0.6 1 23 213 235 213 235 0.98

3 27 3.8e-05 0.0077 18.1 0.3 2 23 241 262 241 262 0.97

4 27 0.009 1.8 10.6 0.2 3 23 270 290 268 290 0.96

5 27 8.8e-05 0.017 17.0 1.1 2 23 303 324 303 324 0.98

6 27 3.4e-06 0.00068 21.4 1.1 1 23 345 367 345 367 0.99

7 27 2.4e-05 0.0048 18.7 0.3 1 19 373 391 373 392 0.97

8 27 4.3e-05 0.0085 17.9 1.1 1 23 401 424 401 424 0.96

9 27 0.0036 0.71 11.9 1.5 1 23 433 456 433 456 0.97

10 27 5.2e-07 0.0001 24.0 0.4 1 23 579 601 579 601 0.98

11 27 0.00074 0.15 14.0 0.8 1 23 607 629 607 629 0.99

12 27 0.093 19 7.4 4.5 1 23 635 657 635 657 0.97

13 27 0.042 8.3 8.5 4.0 1 21 661 681 661 683 0.94

14 27 0.0053 1.1 11.4 6.2 1 23 738 760 738 760 0.97

15 27 4.3e-05 0.0085 17.9 4.9 1 23 766 788 766 788 0.99

16 27 1.3e-05 0.0025 19.6 2.1 1 23 794 816 794 816 0.98

17 27 0.0014 0.27 13.2 8.2 1 23 822 844 822 844 0.98

18 27 0.052 10 8.2 1.2 2 23 1203 1224 1202 1224 0.96

19 27 0.00027 0.053 15.4 2.4 1 23 1230 1253 1230 1253 0.98

20 27 0.0025 0.5 12.4 4.5 2 23 1258 1279 1257 1279 0.97

21 27 3.8e-08 7.6e-06 27.5 1.4 2 23 1351 1372 1350 1372 0.98

22 27 0.00012 0.024 16.5 5.0 1 23 1378 1400 1378 1400 0.99

23 27 0.00015 0.03 16.2 4.1 1 23 1406 1428 1406 1428 0.97

24 27 5.6e-05 0.011 17.6 3.5 1 23 1434 1456 1434 1456 0.99

25 27 1.9e-06 0.00038 22.2 0.8 2 23 1705 1726 1704 1726 0.97

26 27 2.3e-05 0.0045 18.8 4.6 1 23 1732 1754 1732 1754 0.98

27 27 8.2e-05 0.016 17.1 7.6 1 23 1760 1783 1760 1783 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	5.6e-05	0.011	17.6	0.8	2	23	186	207	185	207	0.96
2	27	0.00016	0.031	16.2	0.6	1	23	213	235	213	235	0.98
3	27	3.8e-05	0.0077	18.1	0.3	2	23	241	262	241	262	0.97
4	27	0.009	1.8	10.6	0.2	3	23	270	290	268	290	0.96
5	27	8.8e-05	0.017	17.0	1.1	2	23	303	324	303	324	0.98
6	27	3.4e-06	0.00068	21.4	1.1	1	23	345	367	345	367	0.99
7	27	2.4e-05	0.0048	18.7	0.3	1	19	373	391	373	392	0.97
8	27	4.3e-05	0.0085	17.9	1.1	1	23	401	424	401	424	0.96
9	27	0.0036	0.71	11.9	1.5	1	23	433	456	433	456	0.97
10	27	5.2e-07	0.0001	24.0	0.4	1	23	579	601	579	601	0.98
11	27	0.00074	0.15	14.0	0.8	1	23	607	629	607	629	0.99
12	27	0.093	19	7.4	4.5	1	23	635	657	635	657	0.97
13	27	0.042	8.3	8.5	4.0	1	21	661	681	661	683	0.94
14	27	0.0053	1.1	11.4	6.2	1	23	738	760	738	760	0.97
15	27	4.3e-05	0.0085	17.9	4.9	1	23	766	788	766	788	0.99
16	27	1.3e-05	0.0025	19.6	2.1	1	23	794	816	794	816	0.98
17	27	0.0014	0.27	13.2	8.2	1	23	822	844	822	844	0.98
18	27	0.052	10	8.2	1.2	2	23	1203	1224	1202	1224	0.96
19	27	0.00027	0.053	15.4	2.4	1	23	1230	1253	1230	1253	0.98
20	27	0.0025	0.5	12.4	4.5	2	23	1258	1279	1257	1279	0.97
21	27	3.8e-08	7.6e-06	27.5	1.4	2	23	1351	1372	1350	1372	0.98
22	27	0.00012	0.024	16.5	5.0	1	23	1378	1400	1378	1400	0.99
23	27	0.00015	0.03	16.2	4.1	1	23	1406	1428	1406	1428	0.97
24	27	5.6e-05	0.011	17.6	3.5	1	23	1434	1456	1434	1456	0.99
25	27	1.9e-06	0.00038	22.2	0.8	2	23	1705	1726	1704	1726	0.97
26	27	2.3e-05	0.0045	18.8	4.6	1	23	1732	1754	1732	1754	0.98
27	27	8.2e-05	0.016	17.1	7.6	1	23	1760	1783	1760	1783	0.97

Sequence Information

Coding Sequence: ATGTCTGCCAACATGTTGACAGAGCAGAACGTAATAATGGAATTTACTGATTCCAATGATACAGCGCCGATTGGTTTTATCACTACGGATGATGGTCATACGCTTTTCGCAGTGGGTGAACATGAGGATGGCACATTGGAAATTATGGCATCCCCTATTACATTGATGCCACAAAATAACATAGTGTCTTCAGCACTGATAAAGACTGTGGATGGAAACTTTGTTTTGCATCCTtctatttttcaattaaatgtaGAAGATCCACCAGGAACTGTGATGCAACAAGTAAACTTACTTCCAATACAACAGAATGTATCTGCGATTACAGAACAACTGAAAGTAGTACagaatataaatgaatgtGCAACTACAGAACCCTTGTTATCTATCGGAGAAGATAatgcattattaaataaagaagaagatTGTAAGAAGAAGACAGAAGAACAGGCAACAATTGACAatcatgttaaaaataaatctacaTCTGTATCTACATCTGTACATAAAAAGTCTCCAGGAAGACCAAAAAAGACTGAGAATACACAATCTTTGAAGTGTGACATATGTGGACAAGAATTTACAAAACAGATGTTATACCGCAGACATATGGAAAACCATGCTGAAGAAAAACCACACAGATGTCCAAAATGTCCAGCATCTTTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATATCGGCGATCCGAAATGCCCCGAATGTGGTAGGAAATACGCCAGAATGGCGAGTCTCAAATCTCATATGCTGCTGCACGAAAAGGAGGAGAATCTCTTCTGCACGGAGTGCGAGGATGCCTTTTCAACAAaagCTCAATTAGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGGCGAATGAGGATGTTGGTGTACGAAAGTGTAAATTATGCAACAAGCAATTCACGCAACCTGCGCTCTACCGAATGCACATTCGCGAACATTATAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGAATTTCCAAAAGCCGAGTCAGTTGATGCGGCATATCAGAGTGCACACCGGAGAGAAACCGTTTAAGTGTACCGTTTGCAACAGGGCATTTACACAAAAAAGTTCGCTACAAATTCATGCATGGCAACACAACGGTATTCGGCCACACAGCTGCAACCTCTGCAGCGCCAAGTTTAGTCAAAAAGGAAATCTAAAAGCGCATATACTCAGAGTACATAATGCACCGGAAGGTGAGCCGACGTACGCCTGTTCTTATTGCTCTTGTATCTTCAAGAAGCTGGGCAGCTTAAATGGCCACATAAAGCGAGTGCATTCTAATCCGGAGGAGGAATCCGCCGATAAATCCTCGGCAGCTAATTCTAGTATCTCTTCGGAAGCTGACATGCGCGCGACGGTTGATAGCGTTATATCGCAGTTGGCGTCTTTGGAAGCCGTCGTAAATAATACCGCAGGTTCCACGGGGTCCGCGACGTTGAATGCAGAGCAGAACGATATCCTGCAACAGGCGTTGAAAAATAGTGGTTTGCCGAACAAAAACGAAGTCCCTTTGAAAGAAATCGCAGAACCGAAAAAGACGGATTTGCCAACAACATATGTCACATTGTTGGACAAGACTGCTGGCAGTTCTTCGAAGAAGTATCATGCTATAAAGCAACGTTCCATAGGAAATGTACGGTGGTACGTATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACTTGATACGTCACTTACGGGTGCATACGCAAGAAAAGCCCTTTAAGTGTATGTATTGTGTGCGTTCTTTCGCGCTAAAATCGACAATGATAGCGCACGAGCGAACTCACACCGGAATAAAGAAATATGCTTGCGCTTCCTGCAATAAAACTTTTGCGTGCCATAGTAGTCTTACCTCTCATACAAGATTACATATGAAACCGCACAAATGCAATATATGCGGCAAGTTATTCAACTCGAGCATCATCCTGAAAAATCATATGAAGTGTCACATGCGAGAAAAGCCCAAAATATCGCCGGAGGCGGAGAGCCTGGTGCCGCAAGTAGTACTGCAGGAGCCACTTGTCATCAGCGACGCCGGTAACAAGATCAGTGTTGCCCAAGTGCAATCGAAACAAAAGCAATTGTACGAGAACGCTGGCGTGACCAGGCCGCATGAATGTTTGGTCTGTCATGCGGCATTCAGGAAAGTCAGCCATTTGAAACAACATTATCGCAGACATACCGGCGAACGTCCTTACAAGTGCTCCAAATGCGACAGGAGGTTTACATCAAATAGTGTCCTGAAATCTCACTTGCACACGCATGACGACGCAAGGCCGTACAGTTGTTCGGTATGCAACACAAAATTCTCCACGCAAAGTAGCATGAAGAGGCATTTAGTCACGCATAGCAATAAAAGGCCATTTATGTGTCCATATTGTCATAAGACGTTTAAGACGTATGTTAATTGTCGAAAACACATAAAAAGACACAAGCACGAACTGGTGCAACGgCAATTAGAGGAACAAAAGACGCAAGAGCAGAAGGAACAACAGCCTTTGAGAGAAAACAAAGAAGCTGGCTCGGCTCAAGCCTTATCGGCAAGCATCACTCTCACCGAAGATATGGAAGTGTCGTTCCAACCGCAAATGGCGCCAGATTTCACGCAAGCTTTTTCTGATCACTTTCAAAATATCAACGCAGAGAAAGATAAGTCTTTCTTATTGACGAACAGCGCGACAACGTCAGCAGCAAACCaaaatttatctGTCGACACAACTAATTTAGAAACTTCACAAACTTTACATGCCGATGAAACTGGCACCATCACGTTGTCTCATTACTCAGGGGATCAAACCTTCACAGCGGAAAGCATACAAGAAATCGAAGAGACATTGAATCAACAACTGTTTAATATTGGCATGAATCTCGGACTGGCAAACAATCTACCGAAGCAAATGGATGAGACGAATACGAATTCTCTTGACAATTCCAGGGAACAGCCGGTgctcaatataatttatgagcATAACAAAAATCTGGATTCGTCTGGCAATACTATATTCACGTCGCAATTCGATTCATTTGATATGAGCCAGATTACGTTACAGACGGACAGTGAGATGGACATCAATTTGAATCCGACCAACACAACGAGCATATCTGGTATTTTGCCCAGATCCGTGGAAGAAGATGACAGACAAGAAGAACAACGTGCTATTCCGGTTACTACAGTCGATAGTATAGACGCTTCTGCAATTACGAAGAATGCTCATCTAATGGTAATAAATTCTAAGGATAATTGTTCGGAATTGGTGAGCCTTTCGCAAGTATGTCCATCGAAGTACTCGAAGATCATCGCGAAAGCGGACACTACAAACGGATTAATCGAGATGCAAGACGCGACTGAACATGAAAAAGCGCCACAGAAAAGTAATGTTATATCatgcgagagcgagagaaatTCTTTATTCATGAACAACTTTCAAAGTACGATACAGCCGGATACGCTCGTTACTTCAGGAACAAATAATTCTGCCAAAATATCGGagtacaataatttattagagTGTCATATATGCCATCGTAATGGTTTCACGGCAGAGGGATTGAAGGAACATTTGGAATCTCATTGCGGTGCCAAAATGTATGAATGTCCGACGTGTTCCCAGCGATTCCATACGAATGGTGGTCTCAACAGGCACACGAAGAGGCTGCACACAGAGCTATTGAAATGTACGACATGTAAGAAGGTGCTGGACAGTAAATCACAATTGAAACATCACAGCAAAATGCATAGCGGGATTTTAAAAGTTGTGCGCCTGGGACCGAACGAAAAGGATGCGATCTCCTCTAGTTCTTGTCTTCCGTCTATAACGATGCTAGACGTCCGAATGAACACGGACTCGTCGGTATCTGAGAAAGTATTAATGGACGCAGTTGCCGAGAGGAAAAGCATGGACCGCGTGGACGAAAACGCGGAGAGAAAAGAGACGAAAGAATATACGAACAAATGCAAGTACTGTCCGAAAACCTTCCGGAAACCGAGCGATCTCATTAGGCACATTCGCACGCATACGGGCGAGCGGCCATACAAGTGCGATCACTGCAACAAGAGTTTCGCGGTTAAGTGCACTCTAGACTCACATATGAAGGTTCACACGGGCAAGAAAACGTTTTGCTGCCACGTCTGCAACAGCATGTTCGCTACGAAAGGCAGTTTGAAGGTCCACATGCGACTGCACACGGGTTCTAAGCCGTTCAAGTGTCCTATGTGCGACCTGCGATTTCGCACTTCGGGTCATAAGAAGGTGCACATGCAGAAACATGCGAGAGAACATAAGGGCGGCGCGAAGCGCAAGCCTAAACACCAAAAGATTGCGGCAGTAGCTGAAGTGGCGGCTAGCCTCGAAAAGATTGGTAACAGTTCTTTGGACCACACAtcgaggacgacgacgacgacggcggccGTGATCAATGGCGGCGAAATTGCGCCATCGCAGAATCTTGATTATTCCCCGTTGGAACACAATGAAATGAATCTTAGTGGCGCGGTTCACTTGCCGAATCAAATCGCGTTTAATCATACCGATGCGACAACAACGACGATTCTCAACAACAATTCCATGCTGTCTTTAAACGACAGTAACGAGTTGGTGGCGAATCTGCAATTTCTGCTGGCGAACGGTCTCGTCACTATCCAAACAGACGATACGATGCTGACGACGCAGCCAGCATTAAACAGCGCCGCTGAAATGCCGACCAACGTGATCGAATTAGTTGGTACGAATCCTTTCCAGGAAGCTTGCAATCTGGGTAACGCCAATCATCAGATAGTGATAACCAGCCAAGTATCAAGTGAGACGGCGACCACGAATGCGACCGACGCGGCGATTATTCAAATGAACGATTGCTTGCCACCTGTTTCCATAGTACAGATGCAGAATCAAGATACGAATATTGGTGGTGACGAATCCAAAGTAAAGACAAGCATTCAGTCAACAACGACAATATGTGACAGTCAAGCCGTGGCGACGGAGACAGCTAAAACCTCGACGCAGTCATCGCGGAAGGAGTGCGACATATGTGGCAAGACCTTTACAAAGCCATACCAGATGGAGCGGCACAAGCGCATTCATACAGGCGAACGGCCATACAAGTGCGAGCAATGCGACAAGTCATTCGCGCAAAAGTTTACACTGCAACTGCACCAGAAGCATCATACCGGCGATCGGCCGTATCCCTGTCCGCACTGCAAGCACTCGTTCACACAGAAATGCAATTTGCAAACTCATCTGAAGCGCGTCCATCAGTTGGTCATGCTTGACGTCAAAAAACTAAAAAGCGGTCAACAGATGCTGGGCGCGCTTCTGCAGGAAAATCAAGGAGCGGACACCAAATTGATGAATCTGGATGACATACTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence: MSANMLTEQNVIMEFTDSNDTAPIGFITTDDGHTLFAVGEHEDGTLEIMASPITLMPQNNIVSSALIKTVDGNFVLHPSIFQLNVEDPPGTVMQQVNLLPIQQNVSAITEQLKVVQNINECATTEPLLSIGEDNALLNKEEDCKKKTEEQATIDNHVKNKSTSVSTSVHKKSPGRPKKTENTQSLKCDICGQEFTKQMLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNIGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWANEDVGVRKCKLCNKQFTQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHNGIRPHSCNLCSAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRVHSNPEEESADKSSAANSSISSEADMRATVDSVISQLASLEAVVNNTAGSTGSATLNAEQNDILQQALKNSGLPNKNEVPLKEIAEPKKTDLPTTYVTLLDKTAGSSSKKYHAIKQRSIGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGIKKYACASCNKTFACHSSLTSHTRLHMKPHKCNICGKLFNSSIILKNHMKCHMREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENAGVTRPHECLVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLRENKEAGSAQALSASITLTEDMEVSFQPQMAPDFTQAFSDHFQNINAEKDKSFLLTNSATTSAANQNLSVDTTNLETSQTLHADETGTITLSHYSGDQTFTAESIQEIEETLNQQLFNIGMNLGLANNLPKQMDETNTNSLDNSREQPVLNIIYEHNKNLDSSGNTIFTSQFDSFDMSQITLQTDSEMDINLNPTNTTSISGILPRSVEEDDRQEEQRAIPVTTVDSIDASAITKNAHLMVINSKDNCSELVSLSQVCPSKYSKIIAKADTTNGLIEMQDATEHEKAPQKSNVISCESERNSLFMNNFQSTIQPDTLVTSGTNNSAKISEYNNLLECHICHRNGFTAEGLKEHLESHCGAKMYECPTCSQRFHTNGGLNRHTKRLHTELLKCTTCKKVLDSKSQLKHHSKMHSGILKVVRLGPNEKDAISSSSCLPSITMLDVRMNTDSSVSEKVLMDAVAERKSMDRVDENAERKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFKCPMCDLRFRTSGHKKVHMQKHAREHKGGAKRKPKHQKIAAVAEVAASLEKIGNSSLDHTSRTTTTTAAVINGGEIAPSQNLDYSPLEHNEMNLSGAVHLPNQIAFNHTDATTTTILNNNSMLSLNDSNELVANLQFLLANGLVTIQTDDTMLTTQPALNSAAEMPTNVIELVGTNPFQEACNLGNANHQIVITSQVSSETATTNATDAAIIQMNDCLPPVSIVQMQNQDTNIGGDESKVKTSIQSTTTICDSQAVATETAKTSTQSSRKECDICGKTFTKPYQMERHKRIHTGERPYKCEQCDKSFAQKFTLQLHQKHHTGDRPYPCPHCKHSFTQKCNLQTHLKRVHQLVMLDVKKLKSGQQMLGALLQENQGADTKLMNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: iTF_00730221; iTF_00280100; iTF_00868267; iTF_00869048; iTF_00867613; iTF_01254973; iTF_01245367; iTF_00109976;
80% Identity: -