Basic Information

Insect: Lasius platythorax
Gene Symbol: ZNF236
Assembly: GCA_963971435.1
Location: OZ020540.1:4185138-4199824[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00022 0.044 15.8 2.3 2 23 187 208 186 208 0.96

2 27 0.00016 0.033 16.2 0.6 1 23 214 236 214 236 0.98

3 27 4e-05 0.008 18.1 0.3 2 23 242 263 242 263 0.97

4 27 0.0094 1.9 10.6 0.2 3 23 271 291 269 291 0.96

5 27 0.00024 0.048 15.7 1.0 2 23 304 325 304 325 0.98

6 27 3.5e-06 0.00071 21.4 1.1 1 23 346 368 346 368 0.99

7 27 2.5e-05 0.0051 18.7 0.3 1 19 374 392 374 393 0.97

8 27 1.7e-05 0.0034 19.3 1.2 1 23 402 425 402 425 0.96

9 27 0.005 1 11.5 1.9 1 23 434 457 434 457 0.97

10 27 5.5e-07 0.00011 24.0 0.4 1 23 580 602 580 602 0.98

11 27 0.00078 0.16 14.0 0.8 1 23 608 630 608 630 0.99

12 27 0.098 20 7.4 4.5 1 23 636 658 636 658 0.97

13 27 0.047 9.5 8.4 4.1 1 21 662 682 662 684 0.94

14 27 0.0026 0.52 12.4 5.8 1 23 739 761 739 761 0.98

15 27 4.5e-05 0.0089 17.9 4.9 1 23 767 789 767 789 0.99

16 27 1.3e-05 0.0026 19.6 2.1 1 23 795 817 795 817 0.98

17 27 0.001 0.2 13.7 8.1 1 23 823 845 823 845 0.98

18 27 0.093 19 7.5 1.4 2 23 1205 1226 1204 1226 0.97

19 27 6.8e-06 0.0014 20.5 0.6 1 23 1232 1255 1232 1255 0.98

20 27 0.0023 0.47 12.5 2.6 2 23 1260 1281 1259 1281 0.96

21 27 4e-08 8e-06 27.5 1.4 2 23 1352 1373 1351 1373 0.98

22 27 0.00013 0.025 16.5 5.0 1 23 1379 1401 1379 1401 0.99

23 27 0.00016 0.032 16.2 4.1 1 23 1407 1429 1407 1429 0.97

24 27 5.9e-05 0.012 17.6 3.5 1 23 1435 1457 1435 1457 0.99

25 27 3.6e-06 0.00072 21.4 0.8 2 23 1708 1729 1707 1729 0.97

26 27 9e-06 0.0018 20.1 4.2 1 23 1735 1757 1735 1757 0.98

27 27 8.6e-05 0.017 17.1 7.6 1 23 1763 1786 1763 1786 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00022	0.044	15.8	2.3	2	23	187	208	186	208	0.96
2	27	0.00016	0.033	16.2	0.6	1	23	214	236	214	236	0.98
3	27	4e-05	0.008	18.1	0.3	2	23	242	263	242	263	0.97
4	27	0.0094	1.9	10.6	0.2	3	23	271	291	269	291	0.96
5	27	0.00024	0.048	15.7	1.0	2	23	304	325	304	325	0.98
6	27	3.5e-06	0.00071	21.4	1.1	1	23	346	368	346	368	0.99
7	27	2.5e-05	0.0051	18.7	0.3	1	19	374	392	374	393	0.97
8	27	1.7e-05	0.0034	19.3	1.2	1	23	402	425	402	425	0.96
9	27	0.005	1	11.5	1.9	1	23	434	457	434	457	0.97
10	27	5.5e-07	0.00011	24.0	0.4	1	23	580	602	580	602	0.98
11	27	0.00078	0.16	14.0	0.8	1	23	608	630	608	630	0.99
12	27	0.098	20	7.4	4.5	1	23	636	658	636	658	0.97
13	27	0.047	9.5	8.4	4.1	1	21	662	682	662	684	0.94
14	27	0.0026	0.52	12.4	5.8	1	23	739	761	739	761	0.98
15	27	4.5e-05	0.0089	17.9	4.9	1	23	767	789	767	789	0.99
16	27	1.3e-05	0.0026	19.6	2.1	1	23	795	817	795	817	0.98
17	27	0.001	0.2	13.7	8.1	1	23	823	845	823	845	0.98
18	27	0.093	19	7.5	1.4	2	23	1205	1226	1204	1226	0.97
19	27	6.8e-06	0.0014	20.5	0.6	1	23	1232	1255	1232	1255	0.98
20	27	0.0023	0.47	12.5	2.6	2	23	1260	1281	1259	1281	0.96
21	27	4e-08	8e-06	27.5	1.4	2	23	1352	1373	1351	1373	0.98
22	27	0.00013	0.025	16.5	5.0	1	23	1379	1401	1379	1401	0.99
23	27	0.00016	0.032	16.2	4.1	1	23	1407	1429	1407	1429	0.97
24	27	5.9e-05	0.012	17.6	3.5	1	23	1435	1457	1435	1457	0.99
25	27	3.6e-06	0.00072	21.4	0.8	2	23	1708	1729	1707	1729	0.97
26	27	9e-06	0.0018	20.1	4.2	1	23	1735	1757	1735	1757	0.98
27	27	8.6e-05	0.017	17.1	7.6	1	23	1763	1786	1763	1786	0.97

Sequence Information

Coding Sequence: ATGTCCGCCAACATGTTGACAGAACAGAACGTAATTATGGAATTCACTGACTCTAGCAATACAGTACCGATTGGTTTTATAACTACGGATGATGGTCATACGCTTTTTGCAGTGGGTGaacatGAGGATGGCACGTTGGAAATCATGGCGACCCCTATTACGTTAATGCCACAAAATAACATAGTGTCTTCAGCACTGATAAAGACTGTGgatggaaattttattttgcatccTcctatttttcaattaaatgtgGAAGGTCCACCAGGAACTGTGATGCAACAAGCAAACCTACTTCCAATACAACAAAATGGATCTGCGATTATGGAGCAACTAAAAATAGTgcagaatataaatgaatgtGCAATTACAGAATCCTTGTTATCTGTTAGAGACGATAgcaatgtattattaaataaagaagaaaattgtaGAAGGCAGACAGAAAAACAGGCAACAATTGACAatcatgttaaaaataaatctatgtCTGTATCTACATCTGTACATAAAAAGTCTCCAGGCAGACCGAAAAAGACTGAGACTACACAATCTTTGAAGTGTGACATATGTGGGCAAGAATTTACTAAACATACATTATATCGCAGACATATGGAAAACCATGCCGAAGAAAAACCACACAGATGTCCAAAATGCCCAGcatcttttaatattccaACAAATTTCACGCTTCATATGGCAACGCATAACATCGGCGACCCGAAATGCCCCGAATGTGGTAGGAAATACGCCAGAATGGCGAGTCTCAAATCTCATATGCTGCTGCACGAGAAGGAGGAGAATCTCTTCTGCACGGAGTGCGAGGACGCCTTTTCAACGAAGgCCCAACTGGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGGCGAATGAGGATGTTGGCGTACGAAAGTGTAAATTATGCAGCAAGCAATTCACGCAACCCGCACTCTACAGAATGCACATACGCGAACATTATAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGCTTGAAGAATTTTCAAAAGCCGAGCCAGCTAATGCGACATATCAGAGTACACACCGGAGAGAAACCCTTTAAATGTACCGTTTGCAACAGGGCATTCACGCAAAAGAGTTCTCTACAAATCCACGCGTGGCAACACAACGGTATCCGGCCGCACACCTGCAGCCTCTGCAACGCCAAGTTTAGTCAGAAAGGAAATCTAAAGGCGCATATACTCAGAGTACACAATGCGCCGGAAGGTGAGCCGACGTACGCCTGTTCTTATTGCTCCTGCATCTTCAAGAAGCTGGGCAGCTTAAACGGCCACATAAAACGAATGCATTCTAATCCGGAGGAGGAATCCGCCGAGAAATCCTCGGCAGTTAATTCCAGTATCTCCTCGGAAGCTGACATGCGCGCGACAGTCGATAGCGTTATATCGCAGTTGGCGTCTTTGGAAGCCGTTGTAAATAATACTGCAGATTCTACGGGGACCGCAACGTTGAATGCAGAGCAGAACGATATCCTGCAACAGGCGTTGAAAAATAGCGGTCTGCCGAACAAAAACGAAGTCCCTTCGAAAGAAATCGCAGAACCGAAAAAGACGGATTCGCCAACGACGTATGTCACATTGTTGGACAAGACTGCTGGCAGTACTTCGagCAAGTATCACGCCATAAAGCAACGCTGCATAGGGAACGTACGGTGGTACGTATGCTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACTTGATACGTCACTTGCGTGTGCACACGCAGGAAAAACCCTTCAAGTGTATGTATTGCGTACGTTCTTTCGCGTTAAAGTCAACAATGATAGCGCACGAGCGGACTCACACCGGAGTGAAGAAGTACGCTTGCGCCTCCTGCAACAAAACTTTCGCGTGCCATAGTAGTCTTACCTCTCACACAAGATTACACATGAAACCGCACAAATGCAATATATGCGGCAAGTTATTCAATTCGAACATCATCCTGAAAAATCATATGAAGTGTCACATGCGGGAGAAACCCAAGATATCGCCGGAAGCAGAGAGCCTGGTGCCACAAGTGGTACTGCAGGAGCCACTTGTCATAAGTGATGCCGGTAACAAGATCAGTGTTGCTCAAGTGCAATCGAAACAAAAGCAATTATACGAAAACTCCGGCGTGACCAGGCCGCACGAGTGTTGGGTCTGTCACGCGGCATTCAGGAAAGTCAGCCATTTGAAGCAACATTATCGCAGACATACGGGCGAGCGTCCTTACAAGTGCTCCAAATGCGATAgGAGATTTACATCGAATAGTGTCTTAAAATCTCACCTGCACACGCACGACGACGCGAGACCGTACAGTTGCTCCGTATGCAACACAAAATTCTCCACGCAAAGTAGCATGAAGAGGCATTTGGTCACGCATAGCAATAAAAGGCCATATATGTGTCCATATTGTCACAAGACGTTTAAGACGTACGTCAATTGTCGGAAACATATAAAAAGACACAAGCACGAACTGGTGCAACggCAATTGGAGGAACAAAAGACGCAAGAGCAGAAAGAACAACAGCCTTTGAGAGAGAACAAAGAAGCTGGCTCGGCAGCCTTACCGGCAAGCATCACTCTTGGCGAAGATATGGAAGTGTCGTTTCAACCCCAAATGGCGCCAGATTTCACGCAGGCCTTTTCCGATCAGTTTCAAAATATCAGTGCAGAGAAGGAAAAGTCCTTATTGACGAACAGCGCGACGACGTCAGTAGCAAACCgaaATTTATCTGTTGACACAGCTAATTTAGGAACTTCGCAAACTTTACACGCCGATGAAACTGGTACCATCACGTTATCTCATTACTCTGGAGATCAAACCCTCACAGCGGAAAGCATACGAGAGATCGAGGAGACATTGAATCAACAACTGTTTAATATCGGCATGAATCTCGGGCTGGCGAGCAATCTACCGAGGCAGATGGACGAGACGAATACAAATTCCCTCGACAATTCCAGGGAACAACCGGTGCTCAATATAATTTACGAGCATAACAAAAATCTGGATTCGTCCGGCAATGCCATATTCACGTCGCAATTCGATTCATTTGACATGAGCCAGATTACGTTACAGACGGATAGCGAGATGGACATCGGTTTGAATCCGAGCAACACGGCGAGCATGTCCGGTATTTTACCCAGATCTGTGGAAGGGAACAACAGACAGCAAGAAGAACAACGAGCTATTCCAGTTACTACAATTGATAATATAGACACTTCTGCAATTACGAAGAACGCTCATCTGATGGTAATAAATCCTAAGGATAATTGTTCGGAATTGGTGAGGCTTTCGCAAGTATGCCCGTCGAAGTACTCGAAGGCCATCGCGAAACCGGACACCGCAAACGGATTGATCGAGGTGCAAGGCGCGACTGAACATGAAAAAGCGCCAcagaaaagtaatattatatcatgcgagagcgagagcgagagaaattcTTTATTCATGAAGAATTTTCAAAGTACAATACAACCGGAAACGTTCGTTTCTTCCAGAACGAATAATTCGGCCAAAATATCGGAGTACAATAATCTGTTGGAGTGCCACATATGCCGCCGTAATGGTTTCACGGCAGAGAGATTGaagGAACATTTGAGATCTCATTGCGGTGCCAAAACGTACGAATGTCCGGAGTGTTCCCAGCGATTCTATACGAATGGCGGTCTCAGCAGGCACATGAAGAGATTGCATACGGAACTGTTGAAATGTACGACTTGTAAGAAGGTGCTGGACAATAAGtcgcaattaaaatatcataacaAGATGCATAGCGGGGTTTGGAAAGTTATGCGCGTGGGATCGAACGAGAAGGAAGTGATCTCCAGTTCTCGCCTTTCGTCGATAACGACGCTAGACATCCGAGCGAATCCGGACTCGTCGGTATCTGAGAAGGTATTGATGGACGCAGTTGCCGAGAAGAAGAGCATGGATCGCGTGAACGAAAACGCGGAGAGGAAAGAGACGAAAGAATATACGAACAAATGCAAGTACTGTCCGAAAACTTTCCGCAAGCCGAGCGACCTTATTAGACACATTCGCACGCATACAGGCGAGCGGCCGTACAAGTGCGACCACTGCAACAAGAGCTTCGCGGTTAAGTGCACCTTGGACTCGCACATGAAGGTTCACACGGGCAAGAAAACGTTCTGCTGTCATGTCTGCAACAGCATGTTCGCCACGAAGGGCAGTTTAAAGGTCCACATGCGACTGCACACGGGTTCGAAGCCGTTCAAGTGTCCCATGTGCGACCTGCGATTTCGCACTTCGGGTCATAAGAAGGTGCACATGCAGAAACATGCGAGGGAACATAAAGGCGGTGCGAAGCGCAAGCCTAAACACCAAAAGATCGCGGCAGTTGCGCAAGCGGCGGCCAGCCTCGAAAAGATCGGCAACAGTTCTCTGGACCACGCATCGACAacaacgacgatgacgacaacaacaacggcggcggcggcggccgaGGTCGCACCATCGCAGAATCTCGATTATTCCGCGTTGGAGCACGCCGAAATGAACCTTAGCGGTGCGGTTCACCTGCCGGGTCAAATCGCGTTCAATCATACCGAcgcgacgacaacgacgattCTCAACAACAATTCCATGCTGTCTTTAAACGACAGCAACGAGCTGGTGGCGAATCTGCAATTCCTGCTAGCGAACGGTCTCGTCACTATCCAAACAGACGATACCATGCTGACGACGCAGCCAGCAACGAACAGCGCCGCCGAAGTGCCGACCAACGTGATCGAGTTGGTCGGTACGAATCCTTTCCAGGAAGCCTGCAATCTGGGTAACGCCAATCATCAGATAGTGATAACCAGCCAGGTGCCAAGTGAGGCGACGACCGCGAATGCGAGCGACGCGGCGATTATTCAGATGAACGATTGCTTGCCACCTGTTTCCATAGTACAGATGCAGAATCACGGTACGAACATCGGTGGCGACGCATCCAAAGCAAAGACGAGCGGTCAGTCGACGACGGCAGCATGTGACAATCAAGCGGCAACGACGGGGACAGCTAAAACTTCGACGCAGTCGTCGCGGAAGGAGTGCGACGTATGCGGCAAGACGTTCACGAAGCCATACCAGATGGAACGGCACAAGCGCATCCACACCGGCGAACGGCCATACAAGTGCGAACAATGCGGCAAGTCATTCGCGCAGAAGTTTACGCTGCAGCTGCACCAGAAGCATCATACCGGCGACCGGCCGTATCCCTGTCCGCACTGCAAGCACTCGTTCACGCAGAAGTGCAATTTGCAGACGCATCTGAAACGCGTCCATCAGGTGGTCATGCTCGACGTCAAGAAACTGAGAAGCGGCCAGCAAATGTTGGGCGCGCTACTGCAGGAGAATCAAGGAACGGACACCAAGTTGGTAAATCTGGATGATATACTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence: MSANMLTEQNVIMEFTDSSNTVPIGFITTDDGHTLFAVGEHEDGTLEIMATPITLMPQNNIVSSALIKTVDGNFILHPPIFQLNVEGPPGTVMQQANLLPIQQNGSAIMEQLKIVQNINECAITESLLSVRDDSNVLLNKEENCRRQTEKQATIDNHVKNKSMSVSTSVHKKSPGRPKKTETTQSLKCDICGQEFTKHTLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNIGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWANEDVGVRKCKLCSKQFTQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHNGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSNPEEESAEKSSAVNSSISSEADMRATVDSVISQLASLEAVVNNTADSTGTATLNAEQNDILQQALKNSGLPNKNEVPSKEIAEPKKTDSPTTYVTLLDKTAGSTSSKYHAIKQRCIGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACASCNKTFACHSSLTSHTRLHMKPHKCNICGKLFNSNIILKNHMKCHMREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENSGVTRPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLRENKEAGSAALPASITLGEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSLLTNSATTSVANRNLSVDTANLGTSQTLHADETGTITLSHYSGDQTLTAESIREIEETLNQQLFNIGMNLGLASNLPRQMDETNTNSLDNSREQPVLNIIYEHNKNLDSSGNAIFTSQFDSFDMSQITLQTDSEMDIGLNPSNTASMSGILPRSVEGNNRQQEEQRAIPVTTIDNIDTSAITKNAHLMVINPKDNCSELVRLSQVCPSKYSKAIAKPDTANGLIEVQGATEHEKAPQKSNIISCESESERNSLFMKNFQSTIQPETFVSSRTNNSAKISEYNNLLECHICRRNGFTAERLKEHLRSHCGAKTYECPECSQRFYTNGGLSRHMKRLHTELLKCTTCKKVLDNKSQLKYHNKMHSGVWKVMRVGSNEKEVISSSRLSSITTLDIRANPDSSVSEKVLMDAVAEKKSMDRVNENAERKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFKCPMCDLRFRTSGHKKVHMQKHAREHKGGAKRKPKHQKIAAVAQAAASLEKIGNSSLDHASTTTTMTTTTTAAAAAEVAPSQNLDYSALEHAEMNLSGAVHLPGQIAFNHTDATTTTILNNNSMLSLNDSNELVANLQFLLANGLVTIQTDDTMLTTQPATNSAAEVPTNVIELVGTNPFQEACNLGNANHQIVITSQVPSEATTANASDAAIIQMNDCLPPVSIVQMQNHGTNIGGDASKAKTSGQSTTAACDNQAATTGTAKTSTQSSRKECDVCGKTFTKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYPCPHCKHSFTQKCNLQTHLKRVHQVVMLDVKKLRSGQQMLGALLQENQGTDTKLVNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: iTF_00729502;
80% Identity: -