Basic Information

Insect: Prenolepis imparis
Gene Symbol: ZNF236
Assembly: GCA_030444845.1
Location: JAUDTA010000007.1:9835177-9849895[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00039 0.076 14.9 2.1 2 23 187 208 186 208 0.96

2 27 0.00016 0.031 16.2 0.6 1 23 214 236 214 236 0.98

3 27 3.8e-05 0.0075 18.1 0.3 2 23 242 263 242 263 0.97

4 27 0.009 1.8 10.6 0.2 3 23 271 291 269 291 0.96

5 27 8.8e-05 0.017 17.0 1.1 2 23 304 325 304 325 0.98

6 27 3.4e-06 0.00066 21.4 1.1 1 23 346 368 346 368 0.99

7 27 2.4e-05 0.0048 18.7 0.3 1 19 374 392 374 393 0.97

8 27 1.6e-05 0.0032 19.3 1.2 1 23 402 425 402 425 0.96

9 27 0.0048 0.93 11.5 1.9 1 23 434 457 434 457 0.97

10 27 5.2e-07 0.0001 24.0 0.4 1 23 580 602 580 602 0.98

11 27 0.00074 0.15 14.0 0.8 1 23 608 630 608 630 0.99

12 27 0.094 18 7.4 4.5 1 23 636 658 636 658 0.97

13 27 0.01 2 10.5 3.4 1 21 662 682 662 684 0.96

14 27 0.0069 1.4 11.0 6.0 1 23 739 761 739 761 0.97

15 27 4.3e-05 0.0084 17.9 4.9 1 23 767 789 767 789 0.99

16 27 1.3e-05 0.0025 19.6 2.1 1 23 795 817 795 817 0.98

17 27 0.0014 0.27 13.2 8.2 1 23 823 845 823 845 0.98

18 27 0.21 41 6.3 1.5 2 23 1202 1223 1201 1223 0.96

19 27 9.1e-05 0.018 16.9 2.2 1 23 1229 1252 1229 1252 0.98

20 27 1.5 3e+02 3.6 4.6 2 23 1257 1279 1256 1279 0.95

21 27 3.8e-08 7.5e-06 27.5 1.4 2 23 1350 1371 1349 1371 0.98

22 27 0.00012 0.024 16.5 5.0 1 23 1377 1399 1377 1399 0.99

23 27 0.00015 0.03 16.2 4.1 1 23 1405 1427 1405 1427 0.97

24 27 5.6e-05 0.011 17.6 3.5 1 23 1433 1455 1433 1455 0.99

25 27 3.4e-06 0.00067 21.4 0.8 2 23 1713 1734 1712 1734 0.97

26 27 2.3e-05 0.0044 18.8 4.6 1 23 1740 1762 1740 1762 0.98

27 27 1.2e-05 0.0023 19.7 5.5 1 23 1768 1791 1768 1791 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00039	0.076	14.9	2.1	2	23	187	208	186	208	0.96
2	27	0.00016	0.031	16.2	0.6	1	23	214	236	214	236	0.98
3	27	3.8e-05	0.0075	18.1	0.3	2	23	242	263	242	263	0.97
4	27	0.009	1.8	10.6	0.2	3	23	271	291	269	291	0.96
5	27	8.8e-05	0.017	17.0	1.1	2	23	304	325	304	325	0.98
6	27	3.4e-06	0.00066	21.4	1.1	1	23	346	368	346	368	0.99
7	27	2.4e-05	0.0048	18.7	0.3	1	19	374	392	374	393	0.97
8	27	1.6e-05	0.0032	19.3	1.2	1	23	402	425	402	425	0.96
9	27	0.0048	0.93	11.5	1.9	1	23	434	457	434	457	0.97
10	27	5.2e-07	0.0001	24.0	0.4	1	23	580	602	580	602	0.98
11	27	0.00074	0.15	14.0	0.8	1	23	608	630	608	630	0.99
12	27	0.094	18	7.4	4.5	1	23	636	658	636	658	0.97
13	27	0.01	2	10.5	3.4	1	21	662	682	662	684	0.96
14	27	0.0069	1.4	11.0	6.0	1	23	739	761	739	761	0.97
15	27	4.3e-05	0.0084	17.9	4.9	1	23	767	789	767	789	0.99
16	27	1.3e-05	0.0025	19.6	2.1	1	23	795	817	795	817	0.98
17	27	0.0014	0.27	13.2	8.2	1	23	823	845	823	845	0.98
18	27	0.21	41	6.3	1.5	2	23	1202	1223	1201	1223	0.96
19	27	9.1e-05	0.018	16.9	2.2	1	23	1229	1252	1229	1252	0.98
20	27	1.5	3e+02	3.6	4.6	2	23	1257	1279	1256	1279	0.95
21	27	3.8e-08	7.5e-06	27.5	1.4	2	23	1350	1371	1349	1371	0.98
22	27	0.00012	0.024	16.5	5.0	1	23	1377	1399	1377	1399	0.99
23	27	0.00015	0.03	16.2	4.1	1	23	1405	1427	1405	1427	0.97
24	27	5.6e-05	0.011	17.6	3.5	1	23	1433	1455	1433	1455	0.99
25	27	3.4e-06	0.00067	21.4	0.8	2	23	1713	1734	1712	1734	0.97
26	27	2.3e-05	0.0044	18.8	4.6	1	23	1740	1762	1740	1762	0.98
27	27	1.2e-05	0.0023	19.7	5.5	1	23	1768	1791	1768	1791	0.97

Sequence Information

Coding Sequence: ATGTCTGCCAACATGTTGACGGAACAGAATGTAATTATGGAATTCACTGACTCTAGCAATACAGTACCGATTGGTTTTATGACTACGGATGATGGGCATACGCTTTTTGCAGTGGGTGaacaTGAGGATGGCACGTTGGAAATCATGGCGACCCCTATTACATTAATGCCACAAAATAACATAGTGTCTTCAGCACTGATAAAGACTGTGGatggaaattttattttgcatcctcctatttttcaattaaatgtgGAAAGTCCACCAGGAAATACTGTGATGCAACAAGCAAACCTACTTCCAATACAACAGACTGGATCTGCGGTTACGGAACAACTAAAAATAGTACAGAATATAAATGAATGTGCAATTACAGAATCCTTGTTGTCTGTTAGAGAAGatagcaatatattattaaataaagaagaaaattgtAGAAGGCAGACAGAAGAACAGGCAATTGACaatcatgttaaaaaaaaacctataTCTGTATCTACATCTATACATAAAAAGTCTCCAGGCAGACCGAAAAAGACTGAGAATACACAATCTTTGAAGTGTGACATATGTGGGCAAGAATTTACTAAGCATATGTTATACCGTAGACATATGGAAAATCATGCTGAAGAAAAACCACATAGATGCCCAAAATGTCCAGCATCTTTTAATATTCCTACAAATTTCACGCTTCATATGGCAACGCATAATATCGGTGACCCGAAATGCCCCGAATGTGGTAGGAAATACGCCAGAATGGCGAGTCTCAAATCTCATATGCTGCTGCACGAGAAGGAGGAGAACCTCTTCTGCACGGAATGCGAGGACGCTTTTTCAACAAAGgcTCAACTAGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGGCGAATGAGGATGTTGGCGTACGAAAGTGTAAATTATGCAACAAGCAATTCACACAACCTGCGCTTTACCGAATGCACATACGCGAACATTATAGGCTACAAACGAAGATAGTAAAGCAAACCAAGAGGGGAACGAAACATAAAACACTGTACAAATGCACCATATGCTTAAAGAATTTCCAAAAGCCGAGCCAGCTAATGCGGCATATCAGGGTACACACTGGAGAGAAACCTTTTAAATGTACCGTTTGCAACAGGGCATTCACGCAAAAGAGCTCGCTACAAATCCACGCGTGGCAACACAATGGTATCCGGCCGCACACCTGCAGCCTCTGCAACGCCAAGTTTAGTCAGAAAGGAAATCTAAAGGCGCATATACTCAGAGTACATAATGCATCGGAAGGTGAGCCGACGTACGCTTGTTCTTATTGCTCCTGCATCTTCAAGAAGCTGGGCAGCTTAAACGGTCACATAAAGCGAATGCATTCTAATCCGGAGGAGGAATCCACCGACAAATCCTCAGCAGCTAATTCCAGTATCTCCTCGGAAACTGATATGCGCGCAACGGTCGATAGTGTTATATCGCAGTTGGCGTCTTTGGAAGCCGTTGTAAATAATACTGCAGATTCTACGGGGACCGCAACGCTGAATGCAGAGCAGAACGATATCCTGCAACAGGCGTTGAAAAATAGCGGTTTGCCGAACAAAAACGAAGTCCCTTTGAAAGAAATCGCAGAGCCGAAAAAGACGGATTCGCCAACAACGTATGTCACATTGTTGGATAAGACGGCAGGCAGTTCTTCAAGCAAGTATCACGCCATAAAGCAACGTTGCATAGGAAACGTACGGTGGTACGTATGCTCGTTCTGCCcgaaagaatttaaaaagcCATCGGACTTGATACGTCACTTGCGTGTGCACACTCAAGAAAAGCCCTTTAAGTGCATGTATTGCGTGCGTTCTTTCGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGAGTGAAAAAGTACGCTTGCGCCTCCTGCAATAAAACTTTCGCGTGCCATAGTAGTCTTACATCTCATACAAGATTACACATGAAACCATACAAGTGCAATATATGCAGCAAGTTATTCAACTCGAGCATCGTCCTGAAAAATCATATGAAGTGCCACACGCGGGAGAAACCTAAGATATCGCCGGAAGCGGAGAGCCTAGTGCCACAAGTGGTCCTGCAGGAGCCACTTGTCATCAGCGACGCCGGTAACAAGATCAGCGTTGCCCAAGTGCAATCGAAACAAAAACAATTGTACGAGAACGCCGGCGCAACCAGACCGCACGTGTGTTCGGTCTGTCACGCGGCATTCAGGAAAATTAGCCATTTGAAGCAACATTCTCGTAGACATACGGGCGAACGTCCTTACAAGTGCTCCAAATGCGATAGGAGATTCACATCGAATAGTGTCCTGAAATCTCACCTACATACACACGACGACACGAGGCCGTATAGTTGTTCGGTATGCAACACAAAGTTCTCTACGCAAAGCAGTATGAAGAGGCATTTGGTTACGCATAGCAATAAAAGGCCATTTATGTGTCCATATTGTCACAAGACGTTTAAGACGTACGTCAATTGTCGGAAACACATAAAAAGACACAAACACGAACTGGTGCAACggCAATTGGAGGAACAAAAAACGCAAGAGCAGAAGGAACAACAGCCTTTAATAGAGAACAAAGAAGCTGACTCGGCACCTTTATCGACAAACATCATTCTTGCCGAAGATATGGAAGTGTCGTTCCAACCGCAAATGGCGCCAGATTTCACGCAGGCCTTTTCCGATCAGTTTCAAAATATCAGcgcagagaaagagaagtCCTTATTGACGAACAGCGCGACGTCAGTAACAAACCaaaatttatccATTGACACAGCTAATTTAGGAACTTCGCAAACTTTACACGCCGATGAAACTGGCACCATTACgttatctcattattctgGAGATCAAACTCTCACAGCGGAAAGCATACGAGAGATCGAGGAGACATTGAATCAACAACTCTTTAATATCGGCATGAATCTCGGACTGACGAATAATTTACCGAGGCAGATGGACGAGACGAATACGAATTCCCTCGACAATTCCAGGGAACAGCCGGTGCTCAATATAATTTACGAGCATAACAAAAATCTGGATTCGTCCGGCAATACCATATTCACGCCGCAATTCGATTCATTTGACATGAGCCAGATTACGTTACAGACGGATAGCGAGATGGACATCGGTTTGAATCCGAACAACACGACGAGCATGTCCAGTATTTTGCCCAGATCCGTGGAAGGAGACAATAGACAGCAAGAAGAACAACAAGTTGTTCCAGTTACTACAATCGATAATATAGACACTTCTGCAATTGCGAAGAACGCTCATTTAATGGTAATAAATCCCAAGGATAATTGTTCGGAATTGGTGAGACTTTCGCAAGTATGTCCATCGAAGTACTCAAAGGCCATCGCGAAAGCGGACACCACAAATGGATTGATCGAGGTGCAAGGCGTGACTGAACATGAAAAATCGCCACAGAAAAGTAACATTATATCATGCGACAGcgagagaaattctttattcaTGAAGGACTTTCAAAGTACAATACAACCGGAAACGTTCGTTTCTTCTGGAACGAATAACTCGGTCAAAATATCGGAGTACACTAATCTGTTGGAGTGTCACATATGTCGCCGTAATGGTTTCACGGCAGAGAGATTGAAgGAACATTTAAAATCTCATGGCGGTGCCAAAATGTACGAGTGTCCGGAGTGTTCTCAGCGATTCTTTACGCATGGCGGTCTCAAGAGGCACTTGAAGAGACTGCACTCAGAGCTATTGAAATGTACGACTTGTACTACGAAAATGCTGGACAACAAATCGCAATTGAAACATCACAACAAGATGCATAGCGCAAGTTGGAAAGTTGTGCGAGTGGAATCGAACGAGAAGGAAGTGATCTCCAATTCCCATCTTCCGTCGATGACGACGTCAGACGTCCGAGTGAATCCGGATTCATCGGTATCCGAGAAGGTATTGATGGATACAGTTGCCGAGAGAAAAAGCATGGACTACGTGGACGAAAACGCGGAGAGGAAAGAGACGAAGGAATATACGAACAAGTGCAAGTACTGTCCGAAAACTTTCCGAAAGCCGAGCGACCTGATTAGGCACATTCGCACGCATACGGGTGAACGACCGTACAAATGCGACCACTGTAACAAGAGCTTCGCGGTTAAGTGCACTTTGGATTCGCACATGAAGGTTCACACGGGCAACAAAACCTTTTGCTGTCATGTCTGTAACAGTATGTTCGCCACGAAGGGCAGTCTGAAGGTCCACATGCGATTGCATACGGGTTCGAAGCCATTCAAGTGTCCCATGTGTGATCTCCGATTTCGCACTTCGGGTCATAAGAAGGTGCACATGCAGAAGCATGCGAGGGAACATAAGGGCGGCGCGAAGCGCAAGCCTAAGCACCAAAAGGTCGCGGAAGAGACGGCCAGCCTCGAAAAGATCGGCAACAGTTCTCTGGATCACacatcgacgacgacgacgacgacgatgacgacgacagCAACGACAACGGCAGCGCCTGTGATCACCGACAGTGAGATCGCGCCATCGCAGAATCTCGATTATTCCTCGTTGGAGAACACCGAAATGAATCTCAGCGATGCGATTCATCTGTCGGCGAGTCAAATCGAGTTTAATCATACTGACACGACGACAGCGACGATTCTCAACAACAACTCCATGCTGTCTTTAAATGACAGCAACGAACTGGTGGCGAATCTGCACTTCTTGCTAGCGAACGGTCTCGTTACTATCCAAACGGACGATGCTATGTTGACGACGCAGCCGGCAACAAACAACACCGCCGAAGTGTCGACCAACGTGATCGAGTTGGTCGGTACGAATCCTTTCCAGGAAGCCTGCAATCTGGGTAATACCAATCATCAGATAGTGATAACCAGCCAGGTGCCAAGTGAGACGACAACCGCGAATGCGAGCGACGCGGCGATTATTCAGATGAACGATTGCTTGCCACCTGTTTCCATAGTACAGATGCAGAATCATGGTACGAGTCTCGGTGACGACGCATCTAAAGCAAAAACAAGCAGTCAGTCAACGACGATAGCATTTGACAGTCAAGCAGTGACGACGGGGACAGCTAAACCCTCGACGCAGAAAGAGTCGTCGCGGAAAGAGTGCGATGTATGCGGCAAGACGTTCACGAAGCCATATCAGATGGAGCGGCACAAGCGCATCCACACGGGCGAACGACCGTACAAGTGCGAACAATGCGACAAATCATTCGCGCAAAAGTTCACGTTGCAGCTGCACCAGAAGCATCATACTGGCGACCGACCATATCCCTGTCCGCACTGCAAGCAATCGTTCACGCAGAAGTGCAATTTGCAGACGCACCTGAAGCGCGTTCATCAGATGGTCATGCTCGACGTCAAGAAACTGAAGAGCGGTCAGCAAATGTTGGGCGCGTTACTGCAAGAAAATCAAGGAACGGACACTAAGTTGATGAATCTGGACGACATCTTGGTGGTGGATTTTCTCAAGTGA
Protein Sequence: MSANMLTEQNVIMEFTDSSNTVPIGFMTTDDGHTLFAVGEHEDGTLEIMATPITLMPQNNIVSSALIKTVDGNFILHPPIFQLNVESPPGNTVMQQANLLPIQQTGSAVTEQLKIVQNINECAITESLLSVREDSNILLNKEENCRRQTEEQAIDNHVKKKPISVSTSIHKKSPGRPKKTENTQSLKCDICGQEFTKHMLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNIGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWANEDVGVRKCKLCNKQFTQPALYRMHIREHYRLQTKIVKQTKRGTKHKTLYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHNGIRPHTCSLCNAKFSQKGNLKAHILRVHNASEGEPTYACSYCSCIFKKLGSLNGHIKRMHSNPEEESTDKSSAANSSISSETDMRATVDSVISQLASLEAVVNNTADSTGTATLNAEQNDILQQALKNSGLPNKNEVPLKEIAEPKKTDSPTTYVTLLDKTAGSSSSKYHAIKQRCIGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACASCNKTFACHSSLTSHTRLHMKPYKCNICSKLFNSSIVLKNHMKCHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENAGATRPHVCSVCHAAFRKISHLKQHSRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLIENKEADSAPLSTNIILAEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSLLTNSATSVTNQNLSIDTANLGTSQTLHADETGTITLSHYSGDQTLTAESIREIEETLNQQLFNIGMNLGLTNNLPRQMDETNTNSLDNSREQPVLNIIYEHNKNLDSSGNTIFTPQFDSFDMSQITLQTDSEMDIGLNPNNTTSMSSILPRSVEGDNRQQEEQQVVPVTTIDNIDTSAIAKNAHLMVINPKDNCSELVRLSQVCPSKYSKAIAKADTTNGLIEVQGVTEHEKSPQKSNIISCDSERNSLFMKDFQSTIQPETFVSSGTNNSVKISEYTNLLECHICRRNGFTAERLKEHLKSHGGAKMYECPECSQRFFTHGGLKRHLKRLHSELLKCTTCTTKMLDNKSQLKHHNKMHSASWKVVRVESNEKEVISNSHLPSMTTSDVRVNPDSSVSEKVLMDTVAERKSMDYVDENAERKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGNKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFKCPMCDLRFRTSGHKKVHMQKHAREHKGGAKRKPKHQKVAEETASLEKIGNSSLDHTSTTTTTTMTTTATTTAAPVITDSEIAPSQNLDYSSLENTEMNLSDAIHLSASQIEFNHTDTTTATILNNNSMLSLNDSNELVANLHFLLANGLVTIQTDDAMLTTQPATNNTAEVSTNVIELVGTNPFQEACNLGNTNHQIVITSQVPSETTTANASDAAIIQMNDCLPPVSIVQMQNHGTSLGDDASKAKTSSQSTTIAFDSQAVTTGTAKPSTQKESSRKECDVCGKTFTKPYQMERHKRIHTGERPYKCEQCDKSFAQKFTLQLHQKHHTGDRPYPCPHCKQSFTQKCNLQTHLKRVHQMVMLDVKKLKSGQQMLGALLQENQGTDTKLMNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: iTF_00729502;
80% Identity: -