Basic Information

Insect: Formica exsecta
Gene Symbol: ZNF236
Assembly: GCA_003651465.1
Location: NW:1627861-1644972[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 3.7e-05 0.0025 17.6 0.8 2 23 221 242 220 242 0.96

2 27 0.0001 0.0069 16.1 0.6 1 23 248 270 248 270 0.98

3 27 2.5e-05 0.0017 18.1 0.3 2 23 276 297 276 297 0.97

4 27 0.0059 0.4 10.6 0.2 3 23 305 325 303 325 0.96

5 27 5.7e-05 0.0039 16.9 1.1 2 23 338 359 338 359 0.98

6 27 2.2e-06 0.00015 21.4 1.1 1 23 380 402 380 402 0.99

7 27 1.6e-05 0.0011 18.7 0.3 1 19 408 426 408 427 0.97

8 27 2.8e-05 0.0019 17.9 1.1 1 23 436 459 436 459 0.96

9 27 0.0023 0.16 11.9 1.5 1 23 468 491 468 491 0.97

10 27 3.4e-07 2.3e-05 23.9 0.4 1 23 614 636 614 636 0.98

11 27 0.00049 0.033 14.0 0.8 1 23 642 664 642 664 0.99

12 27 0.061 4.1 7.4 4.5 1 23 670 692 670 692 0.97

13 27 0.027 1.8 8.5 4.0 1 21 696 716 696 718 0.94

14 27 0.0035 0.23 11.3 6.2 1 23 773 795 773 795 0.97

15 27 2.8e-05 0.0019 17.9 4.9 1 23 801 823 801 823 0.99

16 27 8.3e-06 0.00056 19.6 2.1 1 23 829 851 829 851 0.98

17 27 0.00089 0.06 13.2 8.2 1 23 857 879 857 879 0.98

18 27 0.034 2.3 8.2 1.2 2 23 1237 1258 1236 1258 0.96

19 27 0.00018 0.012 15.4 2.4 1 23 1264 1287 1264 1287 0.98

20 27 0.0016 0.11 12.4 4.5 2 23 1292 1313 1291 1313 0.97

21 27 2.5e-08 1.7e-06 27.5 1.4 2 23 1385 1406 1384 1406 0.98

22 27 7.9e-05 0.0053 16.5 5.0 1 23 1412 1434 1412 1434 0.99

23 27 0.0001 0.0067 16.2 4.1 1 23 1440 1462 1440 1462 0.97

24 27 3.7e-05 0.0025 17.5 3.5 1 23 1468 1490 1468 1490 0.99

25 27 1.3e-06 8.4e-05 22.2 0.8 2 23 1738 1759 1737 1759 0.97

26 27 1.5e-05 0.00099 18.8 4.6 1 23 1765 1787 1765 1787 0.98

27 27 5.3e-05 0.0036 17.0 7.6 1 23 1793 1816 1793 1816 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	3.7e-05	0.0025	17.6	0.8	2	23	221	242	220	242	0.96
2	27	0.0001	0.0069	16.1	0.6	1	23	248	270	248	270	0.98
3	27	2.5e-05	0.0017	18.1	0.3	2	23	276	297	276	297	0.97
4	27	0.0059	0.4	10.6	0.2	3	23	305	325	303	325	0.96
5	27	5.7e-05	0.0039	16.9	1.1	2	23	338	359	338	359	0.98
6	27	2.2e-06	0.00015	21.4	1.1	1	23	380	402	380	402	0.99
7	27	1.6e-05	0.0011	18.7	0.3	1	19	408	426	408	427	0.97
8	27	2.8e-05	0.0019	17.9	1.1	1	23	436	459	436	459	0.96
9	27	0.0023	0.16	11.9	1.5	1	23	468	491	468	491	0.97
10	27	3.4e-07	2.3e-05	23.9	0.4	1	23	614	636	614	636	0.98
11	27	0.00049	0.033	14.0	0.8	1	23	642	664	642	664	0.99
12	27	0.061	4.1	7.4	4.5	1	23	670	692	670	692	0.97
13	27	0.027	1.8	8.5	4.0	1	21	696	716	696	718	0.94
14	27	0.0035	0.23	11.3	6.2	1	23	773	795	773	795	0.97
15	27	2.8e-05	0.0019	17.9	4.9	1	23	801	823	801	823	0.99
16	27	8.3e-06	0.00056	19.6	2.1	1	23	829	851	829	851	0.98
17	27	0.00089	0.06	13.2	8.2	1	23	857	879	857	879	0.98
18	27	0.034	2.3	8.2	1.2	2	23	1237	1258	1236	1258	0.96
19	27	0.00018	0.012	15.4	2.4	1	23	1264	1287	1264	1287	0.98
20	27	0.0016	0.11	12.4	4.5	2	23	1292	1313	1291	1313	0.97
21	27	2.5e-08	1.7e-06	27.5	1.4	2	23	1385	1406	1384	1406	0.98
22	27	7.9e-05	0.0053	16.5	5.0	1	23	1412	1434	1412	1434	0.99
23	27	0.0001	0.0067	16.2	4.1	1	23	1440	1462	1440	1462	0.97
24	27	3.7e-05	0.0025	17.5	3.5	1	23	1468	1490	1468	1490	0.99
25	27	1.3e-06	8.4e-05	22.2	0.8	2	23	1738	1759	1737	1759	0.97
26	27	1.5e-05	0.00099	18.8	4.6	1	23	1765	1787	1765	1787	0.98
27	27	5.3e-05	0.0036	17.0	7.6	1	23	1793	1816	1793	1816	0.97

Sequence Information

Coding Sequence: ATGGCGACATTTACATGTGCAGATTATGTATGGGCAAGTGCAAGCTTGCAggatcaattttgttttatatctgaatattgcTATTGTCATCATCGTGTTAAGAATATGTCTGCCAACATGTTGACAGAGCAGAACGTAATAATGGAATTTACTGATTCCAATGATACAGCGCCGATTGGTTTTATCACTACGGATGATGGTCATACGCTTTTCGCAGTGGGTGaACATGAGGATGGCACATTGGAAATTATGGCATCCCCTATTACATTGATGCCACAAAATAACATAGTGTCTTCAGCACTGATAAAGACTGTGGATGGAAACTTTGTTTTGCATCCTtctatttttcaattaaatgtaGAAGATCCACCAGGAACTGTGATGCAACAAGTAAACTTACTTCCAATACAACAGAATGTATCTGCGATTACAGAACAACTGAAAGTAGTacagaatataaatgaatgtGCAACTACAGAACCCTTGTTATCTATCGGAGAAGataatgcattattaaataaagaagaaaattgtaaGAAGAAGACAGAAGAACAGGCAACAATTGACAatcatgttaaaaataaatctacatCTGTATCTACATCTGTACATAAAAAGTCTCCAGGAAGACCGAAAAAGACTGAGAATACACAATCTTTGAAGTGTGACATATGTGGACAAGAATTTACAAAACAGATGTTATACCGCAGACATATGGAAAACCATGCTGAAGAAAAACCACACAGATGTCCAAAATGTCCAGcatcttttaatattccaACAAATTTCACGCTTCATATGGCAACGCATAATATCGGCGATCCGAAATGCCCCGAATGTGGTAGGAAATACGCCAGAATGGCGAGTCTCAAATCTCATATGCTGCTGCACGAAAAGGAGGAGAATCTCTTCTGCACGGAGTGCGAGGATGCCTTTTCAACAAaagctCAATTAGACGCGCATTTGAAGCTTCACGGAGAAAAGTGGGCGAATGAGGATGTTGGTGTACGAAAGTGTAAATTATGCAACAAGCAATTCACGCAACCTGCGCTCTACCGAATGCACATTCGCGAACATTATAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGAATTTCCAAAAGCCGAGTCAGTTGATGCGGCATATCAGAGTGCACACCGGAGAGAAACCGTTTAAGTGTACCGTTTGCAACAGGGCATTTACACAAAAAAGTTCACTACAAATTCATGCATGGCAACACAACGGTATTCGGCCACACAGCTGCAATCTCTGCAGCGCCAAGTTTAGTCAAAAAGGAAATCTAAAAGCGCATATACTCAGAGTACATAATGCACCGGAAGGCGAGCCGACGTACGCCTGTTCTTATTGCTCTTGTATCTTCAAGAAGCTGGGCAGCTTAAATGGCCACATAAAGCGAGTGCATTCTAATCCGGAGGAGGAATCCGCCGATAAATCCTCGGCAGCTAATTCTAGTATCTCTTCGGAAGCTGACATGCGCGCGACGGTTGATAGCGTTATATCGCAGTTGGCGTCTTTGGAAGCCGTCGTAAATAATACCGCAGGTTCCACGGGGTCCGCGACGTTGAATGCAGAGCAGAACGATATCCTGCAACAGGCGTTGAAAAATAGTGGTTTGCCGAACAAAAACGAAGTCCCTTTGAAAGAGATCGCAGAACCGAAAAAGACGGATTTGCCAACAACATATGTCACATTGTTGGACAAGACTGCTGGCAGTTCTTCGAAGAAGTATCATGCTATAAAGCAACGTTGCATAGGAAATGTACGGTGGTACGTATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACTTGATACGTCACTTACGGGTGCATACGCAAGAAAAGCCCTTTAAGTGTATGTATTGTGTGCGTTCTTTCGCGCTAAAATCGACAATGATAGCGCACGAGCGAACTCACACCGGAATAAAGAAATATGCTTGCGCTTCCTGCAATAAAACTTTTGCGTGCCATAGTAGTCTTACCTCTCATACAAGATTACATATGAAACCGCACAAATGCAATATATGCGGCAAGTTATTCAACTCGAGCATCATCCTGAAAAATCATATGAAGTGTCACATGCGGGAAAAGCCCAAAATATCGCCGGAGGCGGAGAGCCTGGTGCCGCAAGTAGTACTGCAGGAGCCACTTGTCATCAGCGACGCCGGTAACAAGATCAGTGTTGCCCAAGTGCAATCGAAACAAAAGCAATTGTACGAGAACGCTGGCGTGACCAGGCCGCATGAATGTTTGGTCTGTCATGCGGCATTCAGGAAAGTCAGCCATTTGAAACAACATTATCGCAGACATACCGGCGAACGTCCTTACAAGTGCTCCAAATGCGACAGGAGGTTTACATCAAATAGTGTCCTGAAATCTCACTTGCACACGCATGACGACGCAAGGCCGTACAGTTGTTCGGTATGCAACACAAAATTCTCCACGCAAAGTAGCATGAAGAGGCATTTAGTCACGCATAGCAATAAAAGGCCATTTATGTGTCCATATTGTCATAAGACGTTTAAGACGTATGTCAATTGTCGAAAACACATAAAAAGACACAAGCACGAACTGGTGCAACGgcAATTAGAGGAACAAAAGACGCAAGAGCAGAAGGAACAACAGCCTTTGAGAGAAAACAAAGAAGCTGGCTCAGCTCAAGCCTTATCGGCAAGCATCACTCTCACCGAAGATATGGAAGTGTCGTTCCAACCGCAAATGGCGCCAGATTTCACGCAAGCTTTTTCTGATCACTTTCAAAATATCAACGCAGGGAAAGATAAGTCTTTCTTATTGACAAACAGCGCGACAACGTCAGCAGCAAACCaaaatttatctGTCGACACAACTAATTTAGAAACTTCACAAACTTTACATGCCGATGAAACTGGCACCATCACGTTGTCTCATTACTCAGGGGATCAAACCTTCACAGCGGAAAGCATACAAGAAATCGAAGAGACATTGAATCAACAACTGTTTAATATTGGCATGAATCTCGGACTGGCAAACAATCTACCGAAGCAAATGGAGACGAATACGAATTCTCTTGACAATTCCAGGGAACAGCCGGTgctcaatataatttatgagcATAACAAAAATCTGGATTCGTCTGGCAATACTATATTCACGTCGCAATTCGATTCATTTGATATGAGCCAGATTACGTTACAGACGGACAGTGAGATGGACATCAATTTGAATCCGACCAACACAACGAGCATATCTGGTATTTTGCCCAGATCCGTGGAAGGAGATGACAGACAAGAAGAACAACGTGCTATTCCGGTTACTACAGTCGATAGTATAGACGCTTCTGCAATTACGAAGAATGCTCATCTAATGGTAATAAATTCTAAGGATAATTGTTCGGAATTGGTGAGCCTTTCGCAAGTATGTCCATCGAAGTACTCGAAGATCATCGCGAAAGCGGACACTACAAACGGATTAATCGAGATGCAAGACGCGACTGAACATGAAAAAGCGCCACAGAAAAGTAATGTTATATCatgcgagagcgagagaaattctttattcatGAACAACTTTCAAAGTACGATACAGCCGGATACGCTCGTTTCTTCAGGAACAAATAATTCTGCCAAAATATCGgagtacaataatttattagagtGTCATATATGCCATCGTAATGGTTTCACGGCAGAGGGATTGAAGGAACATTTGGAATCTCATTGCGGTGCCAAAATGTATGAATGTCCGACGTGTTCCCAGCGATTCCATACGAATGGTGGTCTCAACAGGCACACGAAGAGGCTGCACACAGAGCTATTGAAATGTACGACATGTAAGAAGGTGCTGGACAGTAAATCACAATTGAAACATCACAGCAAAATGCATAGCGGGATTTTAAAAGTTGTGCGCCTGGGACCGAACGAAAAGGATGCGATCTCCTCTAGTTCTTGTCTTCCGTCTATAACGATGCTAGACGTCCGAATGAACACGGACTCGTCGGTATCTGAGAAAGTATTAATGGACGCAGTTGCCGAGAGGAAAAGCATGGACCGCGTAGACGAAAACGCGGAGAGAAAAGAGACGAAAGAATATACGAACAAATGCAAGTACTGTCCAAAAACCTTCCGGAAACCGAGCGATCTCATTAGGCACATTCGCACGCATACGGGCGAGCGGCCATACAAGTGCGATCACTGCAACAAGAGCTTCGCGGTTAAGTGCACTCTAGACTCACATATGAAGGTTCACACGGGCAAGAAAACGTTTTGCTGCCACGTCTGCAACAGCATGTTCGCTACGAAAGGCAGTTTGAAGGTCCACATGCGACTGCACACGGGTTCTAAGCCGTTCAAGTGTCCTATGTGCGACCTGCGATTTCGCACTTCGGGTCATAAGAAGGTGCACATGCAGAAACATGCGAGAGAACATAAGGGCGGCGCGAAGCGCAAACCTAAACACCAAAAGATCGCGGCAGTAGCGGAAGTGGCGGCTAGCCTCGAAAAGATTGGTAACAGGTCTTTGGACCACACatcgaggacgacgacgacggcggccGTGATCAATGGCGGCGAAGTTGCGCCATCGCAGAATCTTGATTATTCCCCGTTGGAACACAATGAAATGAATCTTAGTGGCGCGGTTCACTTGCCGAATCAAATCGCGTTTAATCATACCGATGCGACAACAACGACGATTCTCAACAACAATTCCATGCTGTCTTTAAACGACAGTAACGAGTTGGTGGCGAATCTGCAATTTCTGCTGGCGAACGGTCTCGTCACTATCCAAACAGACGATACGATGCTGACGACGCAGCCAGCATTAAACAGCGCCGCTGAAATGCCGACCAACGTGATCGAATTAGTTGGTACGAATCCTTTCCAGGAAGCTTGCAATCTGGGTAACGCCAATCATCAGATAGTGATAACCAGCCAAGTATCAAGTGAGACGACGACCACGAATGCGACCGACGCGGCGATTATTCAAATGAACGATTGCTTGCCACCCGTTTCCATAGTACAGATGCAGAATCAAGATACGAACGTTGGTGGTGACGAATCCAAAGTAAAGACAAGCATTCAGTCAACAACGACAATATGTGACAGTCAAGCCGTGGCGACGGAGACAGCTAAAACCTCGACGCAGTCATCGCGGAAGGAGTGCGACATATGTGGCAAGACCTTTACAAAGCCATACCAGATGGAGCGGCACAAGCGCATTCATACAGGCGAACGGCCATACAAGTGCGAGCAATGCGACAAGTCATTCGCGCAAAAGTTTACACTGCAACTGCACCAGAAGCATCATACCGGCGATCGGCCGTATCCCTGTCCGCACTGCAAGCACTCGTTCACACAGAAATGCAATTTGCAAACTCATCTGAAGCGCGTCCATCAGCTGGTCATGCTTGACGTCAAAAAACTAAAAAGCGGTCAACAGATGCTGGGCGCGCTTCTGCAGGAAAATCAAGGAGCGGACACCAAATTGATGAATCTGGATGACATACTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence: MATFTCADYVWASASLQDQFCFISEYCYCHHRVKNMSANMLTEQNVIMEFTDSNDTAPIGFITTDDGHTLFAVGEHEDGTLEIMASPITLMPQNNIVSSALIKTVDGNFVLHPSIFQLNVEDPPGTVMQQVNLLPIQQNVSAITEQLKVVQNINECATTEPLLSIGEDNALLNKEENCKKKTEEQATIDNHVKNKSTSVSTSVHKKSPGRPKKTENTQSLKCDICGQEFTKQMLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNIGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWANEDVGVRKCKLCNKQFTQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKNFQKPSQLMRHIRVHTGEKPFKCTVCNRAFTQKSSLQIHAWQHNGIRPHSCNLCSAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRVHSNPEEESADKSSAANSSISSEADMRATVDSVISQLASLEAVVNNTAGSTGSATLNAEQNDILQQALKNSGLPNKNEVPLKEIAEPKKTDLPTTYVTLLDKTAGSSSKKYHAIKQRCIGNVRWYVCSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGIKKYACASCNKTFACHSSLTSHTRLHMKPHKCNICGKLFNSSIILKNHMKCHMREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENAGVTRPHECLVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCNTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHIKRHKHELVQRQLEEQKTQEQKEQQPLRENKEAGSAQALSASITLTEDMEVSFQPQMAPDFTQAFSDHFQNINAGKDKSFLLTNSATTSAANQNLSVDTTNLETSQTLHADETGTITLSHYSGDQTFTAESIQEIEETLNQQLFNIGMNLGLANNLPKQMETNTNSLDNSREQPVLNIIYEHNKNLDSSGNTIFTSQFDSFDMSQITLQTDSEMDINLNPTNTTSISGILPRSVEGDDRQEEQRAIPVTTVDSIDASAITKNAHLMVINSKDNCSELVSLSQVCPSKYSKIIAKADTTNGLIEMQDATEHEKAPQKSNVISCESERNSLFMNNFQSTIQPDTLVSSGTNNSAKISEYNNLLECHICHRNGFTAEGLKEHLESHCGAKMYECPTCSQRFHTNGGLNRHTKRLHTELLKCTTCKKVLDSKSQLKHHSKMHSGILKVVRLGPNEKDAISSSSCLPSITMLDVRMNTDSSVSEKVLMDAVAERKSMDRVDENAERKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCNSMFATKGSLKVHMRLHTGSKPFKCPMCDLRFRTSGHKKVHMQKHAREHKGGAKRKPKHQKIAAVAEVAASLEKIGNRSLDHTSRTTTTAAVINGGEVAPSQNLDYSPLEHNEMNLSGAVHLPNQIAFNHTDATTTTILNNNSMLSLNDSNELVANLQFLLANGLVTIQTDDTMLTTQPALNSAAEMPTNVIELVGTNPFQEACNLGNANHQIVITSQVSSETTTTNATDAAIIQMNDCLPPVSIVQMQNQDTNVGGDESKVKTSIQSTTTICDSQAVATETAKTSTQSSRKECDICGKTFTKPYQMERHKRIHTGERPYKCEQCDKSFAQKFTLQLHQKHHTGDRPYPCPHCKHSFTQKCNLQTHLKRVHQLVMLDVKKLKSGQQMLGALLQENQGADTKLMNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00280100;
90% Identity: iTF_00729502;
80% Identity: -