Basic Information

Insect: Fopius arisanus
Gene Symbol: RREB1
Assembly: GCA_000806365.1
Location: NW:710324-723096[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0008 0.054 13.2 0.0 1 23 38 60 38 60 0.98

2 16 0.0001 0.0069 16.0 0.3 1 23 74 96 74 96 0.98

3 16 1.4e-07 9.3e-06 25.0 1.3 1 23 102 125 102 125 0.98

4 16 0.22 15 5.5 0.0 1 23 212 236 212 236 0.95

5 16 0.032 2.2 8.2 1.7 2 23 242 264 242 264 0.92

6 16 0.55 37 4.3 0.4 1 19 318 336 318 339 0.90

7 16 0.0056 0.38 10.5 1.4 1 23 448 470 448 470 0.97

8 16 0.00069 0.047 13.4 0.4 1 23 479 501 479 501 0.98

9 16 0.0034 0.23 11.2 2.2 1 23 507 530 507 530 0.96

10 16 0.00039 0.027 14.2 2.8 1 23 907 930 907 930 0.96

11 16 0.00039 0.027 14.2 0.1 3 23 1186 1206 1184 1206 0.97

12 16 0.35 24 4.9 6.0 1 23 1212 1235 1212 1235 0.97

13 16 0.0025 0.17 11.7 2.2 1 23 1274 1298 1274 1298 0.97

14 16 3.3 2.2e+02 1.8 2.5 1 23 1386 1409 1386 1409 0.86

15 16 0.0067 0.45 10.3 0.4 2 23 1459 1480 1458 1480 0.94

16 16 0.0023 0.16 11.7 5.5 1 23 1486 1508 1486 1508 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0008	0.054	13.2	0.0	1	23	38	60	38	60	0.98
2	16	0.0001	0.0069	16.0	0.3	1	23	74	96	74	96	0.98
3	16	1.4e-07	9.3e-06	25.0	1.3	1	23	102	125	102	125	0.98
4	16	0.22	15	5.5	0.0	1	23	212	236	212	236	0.95
5	16	0.032	2.2	8.2	1.7	2	23	242	264	242	264	0.92
6	16	0.55	37	4.3	0.4	1	19	318	336	318	339	0.90
7	16	0.0056	0.38	10.5	1.4	1	23	448	470	448	470	0.97
8	16	0.00069	0.047	13.4	0.4	1	23	479	501	479	501	0.98
9	16	0.0034	0.23	11.2	2.2	1	23	507	530	507	530	0.96
10	16	0.00039	0.027	14.2	2.8	1	23	907	930	907	930	0.96
11	16	0.00039	0.027	14.2	0.1	3	23	1186	1206	1184	1206	0.97
12	16	0.35	24	4.9	6.0	1	23	1212	1235	1212	1235	0.97
13	16	0.0025	0.17	11.7	2.2	1	23	1274	1298	1274	1298	0.97
14	16	3.3	2.2e+02	1.8	2.5	1	23	1386	1409	1386	1409	0.86
15	16	0.0067	0.45	10.3	0.4	2	23	1459	1480	1458	1480	0.94
16	16	0.0023	0.16	11.7	5.5	1	23	1486	1508	1486	1508	0.98

Sequence Information

Coding Sequence: ATGGATTGCACCGAAAAAGTGACTATCGAGAATATTCCGGACCAGCGACACAGTAGTGAAACACAGACCGATGCCGCATCAACTTCATCGGCAGAGCAATTGGAGGGATCATACCCGTGTCCTGCGTGTCCCCTCGTGCTAACATCATCCCGTGACCTGACAAATCATCTCCGGGGTCACAATTCACCCAGAAGTACCGATTACAGCGGTGAGGAGGACTACTCCTGCGGCGTTTGCCACAAAGTTCTTAGCTCAGCAAGTTCCTTGGATCGTCACGTCCTGGTGCACTCGGGTGAGCGTCCATTCAAGTGCAAATACTGCGACATGGCATTCACAACAAATGGAAATATGAATAGACACCTGAGAACAGCGCATCGTGAAGTGTCACCTCACAGTTACACGGATTCCGAGGGTAGCAGTGACTCGGAGAGGCCAGCGACAAATCGACAGGTGGACGAATACAATAACAATGAAATAGCGAAGAGAAGTTCACCAGATCTTGTTGAGTCAGGATCACCGGCAtcgagaaagagaaagagatcAGAGTATCCAGAGGACATTGACATTCAAAGAAAGCCCAAGATTCTTCTGAACAACTCGCGAATCGAGGGAAAGGGTATTCTCTCTAGCTCGTTCATGTGTCCAGTCTGTCCCTCCCGTAGCTTTCCCTCTGGGGCATTCCTTGAGGCCCACCTAGACAAGAATCATCCAGACTACACAGCAGAATGCGACACATGCAACCGCTCCTTTCCGAACCACCGAGTCCTTAATCTCCACAAATTTATGGTTCACTCGATCGACGCATCAGTACCAACGAGAAATCTCAGAAACTCAGTGGTGGGCTTCAACGATCTGACATTCGTCGATTTCTCAgcggaaaaatttccagcaaTAGCTAGAGCAGTGTGCGAGCAGTCTCTTCATCGTCCAGCATCTGGTGAGAGTGCAACATTCCAGTGCTCAAAATGCCTGCGAGCATTTCCGTGCAAGTCAGCCCTTGAGGGACACGAGATGGACTGTGGAACCCCTCACTGTCAAGCTACCCCTGTGGAAGACGATCACTCAAAACGAAACGACTTCTTCGCTGGTCTGAATCTTCAGAACCGTGCGGCCCTCACCGAGGCAAGAGAAGGCAGAGATCTCGCTGACATACAGAGCATTATATCTGTGACATCCGGACCAATTTTCCCCCGATCCGATGCCAGCACTCCGGATCAGCACATCCAAACGTCAAATCCAAACGTCAACTCGTCTGGCTCTTCAGGTACAGCACCATCAGAGAATGGATTAGAGGAGGAAGCGTATGCTGCTGAACTGAAGCAGATGAAACTCAAGGGCCAGTTCCCCTGTCGCCTCTGTCCCGAGGTCTTTCCAAATCTGCGTGCCCTGAAGGGCCACCACAAACACCACATGGGTGTCCGCCCAGGTATGCCATACTCCTGCAATATCTGCCCCTTCACATCAACGGACAAAGCAGCGATGAGCCGTCACCTGAAGCTCCACAACGGCTCGCGCCCCTTCGAGTGCTCCCTCTGCAACTTTGCCTTCACGACGAAAGCCAATTGCGAGAGGCATGTGAAGAACGGCCACAAGATCACAGACAAAGAGGAAATCAAGAATTCCCTGATCGAACACACGGAGGAGGAATCCACGAATGGACGCGAGACCTCACGGGACAGAACATCGAGAGCTATAAGAGAGGACGCCCGTAGGTCCCTAGTCTATACCGAGAGGGATGAGCTTTCCTCTCAGACCCAGTACTCGAGAAGACTCCGCAACTCGAGGCACTCCGACCTCATCGCCGAGCAGGTGAGACTGAGACGATTGGCATCGATGCGTGCAACACCTCTAAGTCACTACGAACAGACAGATGTATTCTCAAGACCACCTCCGATTCACCTGCTGGAGCTGTCCCACAGGGTCTCCGAGGATTCGGAGCATCCCCAGGACTTCACAACATCGAACTACTCGAGAACCGAGGAGGATTCAAGATCATCCGATGACAGTGCATCACTAGTCAACGTCAAAACCGAGCCACACCAAAGACCCCAGGCAAGTCCAATCGACCTGAAGACAACATCAGGTGACGATGCACCATTGGATCTGTCGATGGACGTTCTCGATCTGAGCAAGAAATCAAAGGATAGTGGAGCTGATCTGTCGACAgatgattttgataaaaatcagAAGGACGTGTACGACTCAGCAGCTAATCAACTGCTCCTGACACAGGCCCTCCTGAAAGCTGGACAGTCAGGTCACTCGCAGAGTTCCTTGGAAGCTCTCTATGCCAACGCTCAACTACTCTACCGTAACTTCGGTGGATTTCCGGGAGCTGGGGTTGGAGGGGGAATCCTTCCGCCTTATCTGTTCAATCCACACCTTCTGGGACAGGATTTGGCCATGAGAGATAGATTACAGAAAGAGCTAGTCAGGGGATTTCAGCTGACGAGTGGAGGTACCCTGGTTGAACCACCGATCAATAACACCCGTTTTCCAGGTGGTTATCCCCAGGGAAGAGACTTGACGCCTAGATCTCATGAAGAGCCAAGTGAATACACCAAAATGATGGCGTCGAAAATTGTAAGCAAAGCTGTGCCATCAAGCCCTCGAGACAAGATCGAGACAACGCCCACATCAAATTCCGTGAAGATGGTTATAAAGAACGGTGTGCTGATGCCAAAGCAGAAGCAGAGGAGATACAGAACTGAGAAGCCATTCAGCTGTGAGCACTGCTCAGCTAGATTCACACTGAGGAGCAATATGGAGAGACACATCAAGCAACAGCATCCGCAGCACTGGAGCCAGAGGCCACGTGGTGGTCACTCAACAAGGGGACGACCACCGACTAATCCACCAAGTCTGCTGCATGGCATCAATCACAGTCAGAGTCAGCAGCCCTATCCCGTCATTCTACCAAAAATGGGACAGCCTGAGTATGGTAAGCACGCCATCTCCGATCAAGTGAAGTACGCTATTCTTGCTCAACAATTGAAGGGAAATAAGCACGAGGAGAATGACACCGATGAGGAGTTGATAATCGACGAGGGTGCTGACAAAGAGTGCGAGAATCCTGAGGAGGACAAGCCCATTAGTCTGCTCAGGGGTAAACTTGAGGAGACACCTAGGGATTCTACCAGGGAAGTCACGGAGAAATCTGCAAACTCTGAGAATGCAATGGATCAGGATCCAGTGGACATGAAGGTCAAGTCAGAACCAGAGGACGAGTCAAAGCTCAAGCAGTCAGATGACGACGACATGAACGATAAAACGAGTATCAAAGCGGAGGATGGAAATGCCGATTTGGCGAGTGTCTCCGAACTACTGGACAATGCATCACAGCAATACCAACAGTTTCAGCCACCCTACATGAGCGACGAGGAGGGCTTGGTTGCGTCAACGAGCGACTGCAACAACTCCGGCAGCGATGAAAAATCGGACTCAGTGAATTCTGGTAACTCCGGTCATTCCTCCTCCTCAAAGCTCAAGAAACTcaagaggaagaagaagaagaagaagaagtcCGCTTACTCAATGGCACCAAATCGAGTTATCTGTCCATATTGCGAGCGTCCATTCCCCTGGACCTCATCTCTGAGGAGACACATCCTAACGCACACTGGACAAAAGCCCTACCAGTGTGTCCACTGCTCTCTCCTCTTCACGACTAAATCAAATTGCGATCGCCACCTTTTGAGAAAGCACAAGGCAAATCCCAACAAGATGAGGAGAATCAGAAACTCATCGTCTCCGGAGGCACAGGAGGTGCCCACGAACAATAACGGTACGTTCTCCATGAGAAATGTCCCTGAGAGACCGTACAAATGCAATCAGTGCCCGAGCTCGACATTCTCCACTCTGGGCAATCTCAAGAAGCACAGATCAACGAAGCACTCACACGAGGAGAAATCAAGACCAGAGAGCCCCATGAGCGAAGCTCATTCTGAGAGACAAAACAGTCCTGCACCACCGAGTAAACAGAACGACCAGAGTGGATACGAGAGTCAATCATCGAGTGTCTCTGAGCCAATGGAGCAATCAACTGCATCCACTGAGGTATCAAAAACCGCCCTCAACACCTCATCATCTACCACTGACACACCAAAATCAAGAAGACCCTCACCCAGAGCATCACCAGGCCCTACTGATGCACCATTCAAGTGCCACCTCTGTGACAGTGGCTTTGCTGAACGTCAAGACTGCCTGGAGCACATCAAAGATAACCACGAGCGGTCTTACGAGATGCTTCTCGCCAAAGGTGCTTTGGAGATGGACACTGAAACCCTTGAGGAGCAACAGCCACCACCACACTCCCACCACAGCGATGGTGAGGAGAAACGAGGCAGATTCCCTGATTACAGCAACAGAAAAGTCGTATGTGCTTTCTGCATGCGTCGTTTTTGGTCAGCTGAGGACCTGCGACGTCACATGCGCACACACACAGGTGAAAGACCATTCTCCTGTGACATCTGCTCGAGAAGATTTACCCTGAAGCACAGCATGCTTCGTCACAGGAAGAAGCACGAGTCCGTTGACTCAACAATGTACGTTGGAACAAGTGGCGATGAGGAATCAGCGCCGACTCAACCACCAACGATAACACCTAGAACCCAGCAGGCTCCTCTCATCTCTGTTACCACTGGTGACTCCAGGGTCAGAGAGAGAATCTCTCTACCAACAATGGCACCAATTGCCACTGGTGATGCTGCACCCAACAGTCTCATGAGATTCAATCCCTACGAGAATCTAGCTACACTATCAGGTAAACTCGCTAATACCCAGAACTTCGAGACGGAGACAGCTCCAGACAACGACAATGATCTGATCTCCAATTTACTTGGCATCGGAGACAAGAGTGTCGTTGATCAGATGCTACAAGCATCTGCTGACGATGCAGCCAAGATGCTCGGTGTCAATAGAAATAACGAATGA
Protein Sequence: MDCTEKVTIENIPDQRHSSETQTDAASTSSAEQLEGSYPCPACPLVLTSSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPATNRQVDEYNNNEIAKRSSPDLVESGSPASRKRKRSEYPEDIDIQRKPKILLNNSRIEGKGILSSSFMCPVCPSRSFPSGAFLEAHLDKNHPDYTAECDTCNRSFPNHRVLNLHKFMVHSIDASVPTRNLRNSVVGFNDLTFVDFSAEKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALEGHEMDCGTPHCQATPVEDDHSKRNDFFAGLNLQNRAALTEAREGRDLADIQSIISVTSGPIFPRSDASTPDQHIQTSNPNVNSSGSSGTAPSENGLEEEAYAAELKQMKLKGQFPCRLCPEVFPNLRALKGHHKHHMGVRPGMPYSCNICPFTSTDKAAMSRHLKLHNGSRPFECSLCNFAFTTKANCERHVKNGHKITDKEEIKNSLIEHTEEESTNGRETSRDRTSRAIREDARRSLVYTERDELSSQTQYSRRLRNSRHSDLIAEQVRLRRLASMRATPLSHYEQTDVFSRPPPIHLLELSHRVSEDSEHPQDFTTSNYSRTEEDSRSSDDSASLVNVKTEPHQRPQASPIDLKTTSGDDAPLDLSMDVLDLSKKSKDSGADLSTDDFDKNQKDVYDSAANQLLLTQALLKAGQSGHSQSSLEALYANAQLLYRNFGGFPGAGVGGGILPPYLFNPHLLGQDLAMRDRLQKELVRGFQLTSGGTLVEPPINNTRFPGGYPQGRDLTPRSHEEPSEYTKMMASKIVSKAVPSSPRDKIETTPTSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPSLLHGINHSQSQQPYPVILPKMGQPEYGKHAISDQVKYAILAQQLKGNKHEENDTDEELIIDEGADKECENPEEDKPISLLRGKLEETPRDSTREVTEKSANSENAMDQDPVDMKVKSEPEDESKLKQSDDDDMNDKTSIKAEDGNADLASVSELLDNASQQYQQFQPPYMSDEEGLVASTSDCNNSGSDEKSDSVNSGNSGHSSSSKLKKLKRKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRIRNSSSPEAQEVPTNNNGTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSHEEKSRPESPMSEAHSERQNSPAPPSKQNDQSGYESQSSSVSEPMEQSTASTEVSKTALNTSSSTTDTPKSRRPSPRASPGPTDAPFKCHLCDSGFAERQDCLEHIKDNHERSYEMLLAKGALEMDTETLEEQQPPPHSHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPTQPPTITPRTQQAPLISVTTGDSRVRERISLPTMAPIATGDAAPNSLMRFNPYENLATLSGKLANTQNFETETAPDNDNDLISNLLGIGDKSVVDQMLQASADDAAKMLGVNRNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00351373; iTF_00048174; iTF_01273992; iTF_01273292; iTF_00168723; iTF_00046464; iTF_00047476;
90% Identity: -
80% Identity: -