Basic Information

Insect: Aleiodes alternator
Gene Symbol: RREB1
Assembly: GCA_963921955.1
Location: OY998112.1:5842674-5848814[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0024 0.31 12.2 0.1 1 23 66 88 66 88 0.98

2 16 0.00015 0.02 16.0 0.3 1 23 102 124 102 124 0.98

3 16 2.1e-07 2.6e-05 25.0 1.3 1 23 130 153 130 153 0.98

4 16 1.8 2.3e+02 3.2 0.0 1 23 242 266 242 266 0.93

5 16 0.055 7 8.0 2.6 2 23 272 294 272 294 0.94

6 16 3.6 4.7e+02 2.2 0.6 1 19 348 366 348 368 0.80

7 16 0.092 12 7.2 0.5 1 23 479 501 479 501 0.97

8 16 0.00014 0.018 16.1 0.2 1 23 510 532 510 532 0.98

9 16 0.002 0.26 12.5 2.8 1 23 538 561 538 561 0.96

10 16 0.00059 0.076 14.1 2.8 1 23 938 961 938 961 0.96

11 16 0.00059 0.076 14.1 0.1 3 23 1226 1246 1224 1246 0.97

12 16 0.53 68 4.8 6.0 1 23 1252 1275 1252 1275 0.97

13 16 0.0037 0.48 11.6 2.2 1 23 1312 1336 1312 1336 0.97

14 16 6.9 8.8e+02 1.3 4.5 1 23 1424 1446 1424 1447 0.93

15 16 0.01 1.3 10.3 0.4 2 23 1498 1519 1497 1519 0.94

16 16 0.0035 0.45 11.7 5.5 1 23 1525 1547 1525 1547 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0024	0.31	12.2	0.1	1	23	66	88	66	88	0.98
2	16	0.00015	0.02	16.0	0.3	1	23	102	124	102	124	0.98
3	16	2.1e-07	2.6e-05	25.0	1.3	1	23	130	153	130	153	0.98
4	16	1.8	2.3e+02	3.2	0.0	1	23	242	266	242	266	0.93
5	16	0.055	7	8.0	2.6	2	23	272	294	272	294	0.94
6	16	3.6	4.7e+02	2.2	0.6	1	19	348	366	348	368	0.80
7	16	0.092	12	7.2	0.5	1	23	479	501	479	501	0.97
8	16	0.00014	0.018	16.1	0.2	1	23	510	532	510	532	0.98
9	16	0.002	0.26	12.5	2.8	1	23	538	561	538	561	0.96
10	16	0.00059	0.076	14.1	2.8	1	23	938	961	938	961	0.96
11	16	0.00059	0.076	14.1	0.1	3	23	1226	1246	1224	1246	0.97
12	16	0.53	68	4.8	6.0	1	23	1252	1275	1252	1275	0.97
13	16	0.0037	0.48	11.6	2.2	1	23	1312	1336	1312	1336	0.97
14	16	6.9	8.8e+02	1.3	4.5	1	23	1424	1446	1424	1447	0.93
15	16	0.01	1.3	10.3	0.4	2	23	1498	1519	1497	1519	0.94
16	16	0.0035	0.45	11.7	5.5	1	23	1525	1547	1525	1547	0.98

Sequence Information

Coding Sequence: ATGATGACAGCTCGATGGTATCGATTAGCTCGGGATGTTTTGTCTGTCGCATTTTTCCAGTTAAAAGCGATCGATAACGTGGATAAGTGCGTGAGAACATCAGTGACCATCGAGAACGTGCCGGACCAACAACACAGTAGTGAAATACACACCGATGCAGCATCAACTTCATCCATTGAACAATCGGAGGGAACTTACCCCTGTCCAGCTTGTTCTCTCGTTCTAACATCATCCCGTGACCTAACGAATCACCTCAGAGGTCACAATTCACCACGCAGTACAGATTACAGCGGCGAAGAGGACTATTCCTGTGGTGTTTGTCACAAAGTATTGAGTTCAGCAAGTTCCTTGGATCGTCACGTACTAGTACACTCTGGTGAGCGTCCATTCAAGTGCAAATACTGCGATATGGCATTCACAACAAATGGTAACATGAATAGACACCTGAGAACAGCACATCGTGAGGTGTCACCTCACAGTTACACGGATTCCGAGGGTAGCAGTGACTCGGAGAGGCCACCAACAAGACGACATGTAGATgaatacaataataatgaaatagcTAAACGTACATCACCTGATATTGTTGATGAACCAACATCACCAAGCTCTAGATCAAAGAGAAAGAGATCCGAATTTTCGGACGACATTGATGGACAGAGAAAGCACAAGATTTTGTTGAATAATTCGAGAAGTGATggtaaaaatattcttcaaaattcatatATCTGTCCTGTCTGTCCATCACTGGATTTTCCAACTGGAGCTTTATTAGAAGCTCATCTGGAGAAAAATCATCCTGATTATACAGCTGAGTGTGACTCTTGCAACAGATCATTCAAGAATCATCGAGTCTTGAATCTTCACAGATTCATGGTTCATTTTACGGAAAATCCAACACCACAAAGAAATCTCAGAAACTCAGTGATTGGCTTCAATGATCTGacatttgttgatttttcagCAGACAAATTTCCAGCTATTGCAAGAGCAGTCTGTGAACAATCACTGCATCGTCCAGCATCAGGCGAAAGTGCTACATTCCAGTGCTCCAAGTGCCTTCGTGCATTTCCCTGCAAGTCTGCTCTAGATGGACATGAAATGGATTGTGGCAATCCTTATTACAGAATATCACACAATGAGGAGGATCaatcaaaaagaaatgacTTCTTCGCCGGACTAGATTTACAGAACAAGGCTGCTTTAACTGAAGCCAAGGAGGGAAAAGACCTGGCTGATATTCAGAGTATTATTTCCGTTACATCCGGACCAATTTTTCCAAGATCTGATGCCAGTACTCCAGATCAACACATCAAGATGAATCCAAATATTAATTCTTCAGGGTCTTCTGGTACAGCCTCATCAGAGTACAATGAGGAAGAGGCTCAAGATGCATTTGCTGCTGAGTTGAGGAGAATGAAGCTCAAGGGTGAATTCCCATGTCGACTTTGTAgtgcaatttttccaaatttgagaGCACTAAAAGGACATCACAAAGAACACATGGGCGTTGGCCCAGGTATGCCATATCCATGCAACGTTTGTCCATTCACATCAACCGACAAAGCTGCACTCAGTCGTCATCTCAAGTCACACAATGGTGTAAGACCTTATCAGTGCTCTCTCTGCAAATACGCATTCACAACGAAAGCAAACTGCGAGAGGCATGTGAAGAATGGCCACAAAATCTTGACCAGAGAAGAGATAAAAAGTGTTCTCATCTATCATCCAAATGAGGACGCAGCCAACGAACCACTCGAGAGAACATCACCAAGAGTCATGAGGGATGATGCAAGAAAATCTCTAGTCTATCCTGATCGTGAAGATCTCCATCATCAGAGCTATTCCCTAGATTCAAAGCATTCTGAGCTCATCGCCGATGAAATCAGACTGAGACAACAAATGGGATTGGCATCATTACGTGCTACTCCAGTCAGTCATTACGAGAAATCCGATATTTTCTCAAGGCCACCACCTGTTCATCTCCTTGAACTGTCACACAGAATGTCCGAAGATTCCGAAAACCCTCAAGACTTCACAAAATCAAACTATGGAAAGATGCACGAGGATGATTCAAGATCATCAGATGGTAGCGTATCACTAGTCAGCGATGCCAAATCCGACGCACACCAAAGAGTACAGGCTAGTCCAATTGACTTGAAACATACCTCAACTGGTGATGATGCACCATTGGATTTGTCCATGGATGTTCTCGATCTGAGTAAAAAATCAAAGGACAATGGAAATGATTCGTCAACAACTGATGATTATGACAAGAATCAGAAAGATATGTATGAGTCAGCGACCAATCAGCTTCTTCTTACACAAGCTCTCTTGAAAGCTGGACAATCTGGAAATTCACCAAGTTCCCTTGAAGCACTCTATGCCAATGCGCATCTGCTTTACAGGAATTTCGGAGGATTTTCGGCTGCTGGAGTTGGTGCGGGAATTTTGCCACCTTATTTATTCAATCCACACATATTTGGACAGGACTTTGCCATGAGAGATAGACTGCAGAAAGAGCTTGTTAGAGGACTTCAATTAACGAGCGGAGGAACTCTGGTTGAACCACCATTGAACAACTCTAGTTATGAATCTCCTTATCCCCAAGGAAGAGATCTATCTTCTCGACCCATGGATGATCAGAGTGAATATTCCAAGATGATGGCTTCTAAAATGTCTAACAAGATTTCCGCCAGCCCAAGAGAGAAGATTGAAACAACACCCACGTCAAATTCAGTGAAGATGGTTATTAAAAATGGAGTGCTGATGCCCAAACAGAAACAGAGGAGATACAGAACTGAAAAACCCTTCAGTTGTGAGCACTGTTCAGCAAGGTTCACATTGAGAAGTAATATGGAGAGGCACATTAAACAGCAGCATCCTCAGCACTGGAGCCAGAGGCCTCGTGGTGGTCACTCAACGAGAGGAAGACCTCCACTATCAAACCCACCAACATTATTACACGGTTTGAATCATTCCAATCAACAGTCACAATCAACTTATCCCAATATCCTCCCAAAAATTGGACAGTCAATGCCTTCTGAATTCGGAAAACATGCCATTTCTGATCAGGTAAAATACGCAATTCTTGCACAGCAGCTGAAAGGGAACAAGCACGAAGAGAATGATACAGATGAGGAGCTCATCATTGATGAAGCAGCAGAGGAGAAAGAGTGTGAGCAGCACGAAGAAGAGAGACCAACGAGTTTGCTGAGAGGAAAACTGGAGGAGAATGCAAAGGattcgaaaaaggaaaatgaaaatccctCGAATTTTGAGACTTCAGTGGAACGAGATGAAGATGCATTGAATATGAAGATAAAGGCAGAACCTGAAGAGATCGAATGCAAAGAGAAGCATTTAGAAGATACTGAAATAAACGAGAGAATCATTAAAACTGAAGATGGAAACGCTGATTTAGCGAGTGTATCGGAACTCCTGGACAATGCATCACAGCAGTATCAACAGTTTCAGCCTCAGTACATGAGTGACGAGGAGGGTTTAGTCGCTTCAACGAGTGACTGCAACAATTCTGGAAGTGACGAAAAATcagattcaattaattccggAAATTCTGGCCATTCTTCGTCCTCAAAACTGAGGAAactcaagagaaaaaaaaagaagaagaaaaagaagtctGCATATTCAATGGCACCAAATCGTGTTATTTGTCCATACTGTGAGCGTCCATTTCCCTGGACCTCTTCTCTGAGACGACACATTTTAACCCACACTGGACAAAAACCATATCAGTGTGTTCACTGCTCTCTTCTCTTCACAACAAAGTCAAATTGTGATCGTCACTTGTTGAGAAAGCACAAAGCAAATCCCAACAAAATGAGAAGAATCAGAACATCATCTTCACCAGAGGCTCAAGAAATTCCATCAAACAATACATTCTCAATGAGAAATGTCCCAGAAAGACCATACAAATGCAATCAATGCCCAAGCTCCACATTCTCAACTCTTGGTAACCTGAAGAAGCACAGATCCACCAAACACTCGCATGAGGGTAAATCACGACCAGAGAGCCCAATGAGTGAAGCACACTCAGAGAGACAGCCAAGTCCTACACCAACGAGTAAACAGAATGATCAGAGTGGCTACGAGAGTCAGTGCTCCAGTATTTCCGAGAATTTGgagaattcatcaacaataatTGAAGTTCCCAAGTCCAATCCAAACACATCATCTTCAACAAATGAGACACCAAGATCTAGACGACCATCTCCACGATCCTCGCCTGGACCAACTGATGCGCCATTCAAGTGTCACCTTTGTGACAGCGGTTTTGCAGAGCGTCAAGACTGTCTGGAGCACATAAAAGAGCATCATAAGAGATCTTACGAGATGCTGCTGGCTAAGGGAGCCTTGGACATGGATACGGAGAATCCAGAGGATCAGCAGCCACCACCATCACAACAGCATCACAGCGATGGAGAAGAGAAGCGAGGTCGCTTTCCTGATTACAGCAATCGGAAAGTTGTATGTGCATTCTGCATGCGTCGTTTCTGGTCAGCTGAAGATCTCCGACGTCACATGCGTACCCACACAGGTGAACGTCCATTCTCATGTGACATTTGTTCACGTCGTTTCACATTGAAACACAGTATGCTACGTCATCGCAAGAAACACGAATCTGTTGACTCAACAATGTACGTAGGTACGAGCGGTGATGAAGAGTCAGCACCAACTCAGCCACCAACGATAACACCAAGAACCCAACAAACTCCACTAATATCAATTGCAAGTGGTGAATCAAGAATTCGTGAGAGAATTAGCCTGCCAACAGTAGCAACAGTTGCAACTGGTGATGCTGCACCAAACAGTCTAATGAGGTTCAATCCCTACGAAAAATTGGCAACACTAACTGGTAAATTAGCAAGTGTCCATAATTTTGGCTCTGAAACAACACCAGACAATGACAAtgatttaatctcaaatttactTGGTATCAGAGACAAAAGTATAATTGACAAAGTATTGCAAGCTTCTGCTGATGATGCAGCAAAACTTCTTGGTGTTAATAGAAGCCacgaatga
Protein Sequence: MMTARWYRLARDVLSVAFFQLKAIDNVDKCVRTSVTIENVPDQQHSSEIHTDAASTSSIEQSEGTYPCPACSLVLTSSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPPTRRHVDEYNNNEIAKRTSPDIVDEPTSPSSRSKRKRSEFSDDIDGQRKHKILLNNSRSDGKNILQNSYICPVCPSLDFPTGALLEAHLEKNHPDYTAECDSCNRSFKNHRVLNLHRFMVHFTENPTPQRNLRNSVIGFNDLTFVDFSADKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALDGHEMDCGNPYYRISHNEEDQSKRNDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPIFPRSDASTPDQHIKMNPNINSSGSSGTASSEYNEEEAQDAFAAELRRMKLKGEFPCRLCSAIFPNLRALKGHHKEHMGVGPGMPYPCNVCPFTSTDKAALSRHLKSHNGVRPYQCSLCKYAFTTKANCERHVKNGHKILTREEIKSVLIYHPNEDAANEPLERTSPRVMRDDARKSLVYPDREDLHHQSYSLDSKHSELIADEIRLRQQMGLASLRATPVSHYEKSDIFSRPPPVHLLELSHRMSEDSENPQDFTKSNYGKMHEDDSRSSDGSVSLVSDAKSDAHQRVQASPIDLKHTSTGDDAPLDLSMDVLDLSKKSKDNGNDSSTTDDYDKNQKDMYESATNQLLLTQALLKAGQSGNSPSSLEALYANAHLLYRNFGGFSAAGVGAGILPPYLFNPHIFGQDFAMRDRLQKELVRGLQLTSGGTLVEPPLNNSSYESPYPQGRDLSSRPMDDQSEYSKMMASKMSNKISASPREKIETTPTSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPLSNPPTLLHGLNHSNQQSQSTYPNILPKIGQSMPSEFGKHAISDQVKYAILAQQLKGNKHEENDTDEELIIDEAAEEKECEQHEEERPTSLLRGKLEENAKDSKKENENPSNFETSVERDEDALNMKIKAEPEEIECKEKHLEDTEINERIIKTEDGNADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSINSGNSGHSSSSKLRKLKRKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRIRTSSSPEAQEIPSNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSHEGKSRPESPMSEAHSERQPSPTPTSKQNDQSGYESQCSSISENLENSSTIIEVPKSNPNTSSSTNETPRSRRPSPRSSPGPTDAPFKCHLCDSGFAERQDCLEHIKEHHKRSYEMLLAKGALDMDTENPEDQQPPPSQQHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPTQPPTITPRTQQTPLISIASGESRIRERISLPTVATVATGDAAPNSLMRFNPYEKLATLTGKLASVHNFGSETTPDNDNDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00728833;
90% Identity: iTF_00047476;
80% Identity: -