Basic Information

Insect: Coelinius sp
Gene Symbol: RREB1
Assembly: GCA_035578325.1
Location: JAOZGT010000002.1:7118453-7127628[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0069 0.75 10.8 0.1 1 23 38 60 38 60 0.98

2 16 0.00015 0.017 16.0 0.3 1 23 74 96 74 96 0.98

3 16 2e-07 2.2e-05 25.0 1.3 1 23 102 125 102 125 0.98

4 16 1.8 2e+02 3.2 0.0 1 23 213 237 213 237 0.93

5 16 0.019 2 9.4 2.7 2 23 243 265 243 265 0.94

6 16 0.13 14 6.8 0.4 1 20 319 338 319 340 0.94

7 16 0.091 10 7.3 0.5 1 23 450 472 450 472 0.97

8 16 0.00014 0.015 16.2 0.2 1 23 481 503 481 503 0.98

9 16 0.002 0.22 12.5 2.8 1 23 509 532 509 532 0.96

10 16 0.00059 0.064 14.2 2.8 1 23 905 928 905 928 0.96

11 16 0.00059 0.064 14.2 0.1 3 23 1190 1210 1188 1210 0.97

12 16 0.52 57 4.9 6.0 1 23 1216 1239 1216 1239 0.97

13 16 0.0075 0.82 10.7 2.3 1 23 1278 1302 1278 1302 0.97

14 16 4.9 5.3e+02 1.8 2.5 1 23 1390 1413 1390 1413 0.86

15 16 0.01 1.1 10.3 0.4 2 23 1464 1485 1463 1485 0.94

16 16 0.0035 0.38 11.7 5.5 1 23 1491 1513 1491 1513 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0069	0.75	10.8	0.1	1	23	38	60	38	60	0.98
2	16	0.00015	0.017	16.0	0.3	1	23	74	96	74	96	0.98
3	16	2e-07	2.2e-05	25.0	1.3	1	23	102	125	102	125	0.98
4	16	1.8	2e+02	3.2	0.0	1	23	213	237	213	237	0.93
5	16	0.019	2	9.4	2.7	2	23	243	265	243	265	0.94
6	16	0.13	14	6.8	0.4	1	20	319	338	319	340	0.94
7	16	0.091	10	7.3	0.5	1	23	450	472	450	472	0.97
8	16	0.00014	0.015	16.2	0.2	1	23	481	503	481	503	0.98
9	16	0.002	0.22	12.5	2.8	1	23	509	532	509	532	0.96
10	16	0.00059	0.064	14.2	2.8	1	23	905	928	905	928	0.96
11	16	0.00059	0.064	14.2	0.1	3	23	1190	1210	1188	1210	0.97
12	16	0.52	57	4.9	6.0	1	23	1216	1239	1216	1239	0.97
13	16	0.0075	0.82	10.7	2.3	1	23	1278	1302	1278	1302	0.97
14	16	4.9	5.3e+02	1.8	2.5	1	23	1390	1413	1390	1413	0.86
15	16	0.01	1.1	10.3	0.4	2	23	1464	1485	1463	1485	0.94
16	16	0.0035	0.38	11.7	5.5	1	23	1491	1513	1491	1513	0.98

Sequence Information

Coding Sequence: ATGGATTGCTCCACAAAAGtgACTATCGAGAACATTCCGGACCAGCAAAACAACAGTGAAACACATACCGATGCCGCATCAACTTCATCGGTTGAACAATTGGAGGGAACTTACCCCTGTCCCGCCTGTTCCCTCATTCTAACATCATCACGTGATCTGACAAATCACCTTCGAGGTCACAATTCACCCCGCAGTACTGACTACAGTGGCGAAGAGGATTACTCCTGTGGTGTTTGCCACAAAGTTTTAAGTTCAGCAAGTTCTCTAGATCGTCACGTACTAGTACACTCTGGTGAGCGTCCATTCAAGTGCAAATACTGCGATATGGCATTTACAACAAATGGAAATATGAATAGACACCTGAGAACGGCACATCGTGAAGTATCACCTCACAGTTACACGGATTCCGAAGGCAGCAGTGATTCAGAGAGACCGGCAACAAGGCGACACGTTGACGagtataataataatgaaatagcCAAACGCAGTTCACCAGACATTGTTGATTCAGTGTCACCAGCTTCAAGATCAAAGAGAAAGAGATCAGAGTTTCCTGATGACATTGACATACAGAGAAAGCACAAGATCCTGTTGAATCACTCTAGaagtgaaggaaaaaatattcttcaaacaACCTTCATGTGCCCTGTATGTCCATCTCTGGACTTTCCAACGGGAGCACTTCTTGAGGctcatttagaaaaaaatcatccagaCTATACAGCAGAATGTGACACATGCAACAGATCCTTCAAGAACCATCGAGTCCTCAATCTTCACAGATTTATGGTTCATTTCACTGACAACTCAGCACCAACCCGAAACCTCAGAAACTCTGTGATAGGCTTCAATGATTTGACATTTGTCGATTTTTCAGCTGACAAATTTCCAGCAATTGCCAGAGCAGTTTGTGAACAATCTCTCCATCGTCCAGCATCTGGCGAGAGTGCTACATTCCAGTGTTCAAAATGTCTGCGTGCATTCCCCTGCAAATCTGCCCTCGAAGCTCATGAAATGGATTGTGGTAATTCGCATTATCAAGCCACCAATCTGGACGATGATCATTCAAAGCGGAATGACTTTTTTGCTGGATTAGATCTGCAGAATAAAGCAGCTTTGACTGAGGCAAAGGAGGGAAAGGACCTTGCTGATATTCAGAGCATCATCTCTGTGACATCTGGACCAATATTTCCACGATCTGATGCTAGTACTCCTGATCAACACATCAAGATGAATCCAAATGTCAATTCATCTGGTTCCTCAGGTACAGCATCGTCAGAGAACAATGAGGAGGAAGCACAAGATGCATTTTCTgctgaattgagaaaaatgaagctCAAGGGAGAATTCCCATGTCGATTATGCAGCGCCATATTTCCAAATTTGAGAGCTTTGAAAGGACATCACAAAGAGCACATGGGAGTTGCTCCAGGTATGCCATATCCCTGCAACGTCTGTCCCTTCACATCGACGGATAAAGCAGCCCTGAGTCGCCATCTCAAGTCTCACAATGGTGTTCGACCTTATCAGTGCTCTCTCTGCAAATATGCCTTCACAACAAAAGCAAATTGCGAGAGGCATGTGAAAAATGGCCACAAAATCTTGACCAGAGAAGAGATAAAGAGTGTTCTCATTTATCATGCCAATGAGGATGCAGTCAATGAAGGACTCGATAGAACATCACCAAGAGCAATCAGAGATGATGCCCGTAAATCTCTAGTCTATCCTGAACGAAATGAACTTCAGACACACTATTCCCTGAATTCTAGACACTCTGATATGATTGCTGAAGAAGTGAGACTGAGACAGCTAGCATCACTGCGTGCCACTCCTGTCAGTCATTATGAGAAGTCTGATGTCTTCTCAAGACCACCACCAATGCATCTTCTTGAGCTATCACACAGGATTTCCGAAGACTCTGAGAATCCTCATGACTTTACTAAATCAAACTATTCAAAAATGCACGATGAGGACTCGAGATCATCCGATGATAGCGCATCACTAGTCAACGATGCAAAATCCGACGCGCACCAAAGAGCTCAGGCTAGTCCAATTGACATGAAGAGTACCTCAACGGGCGATGATGATGCACCATTGGATCTATCTATGGACGTTCTTGATCtgagtaaaaaatcaaaggaCAATGGAACTGATTCATCCATGACTGATGAATTTGACAAGAGTCAAAAAGAAATGTACGAGTCAGCAACAAGTCAATTCCTCCTGACTCAAGCCCTCCTCAAGGCTGGACAGTCTGGCAATTCACCAAGCTCTTTGGAAGCACTGTATGCAAATGCTCATCTGCTTTACCGAAACTTTGGGGGATTCTCAGGAGCTGGAGTTGGTGGTGGAATATTACCACCCTATCTGTTCAATCCACATATTTTTGGACAGGACTTTGCCATGAGAGATAGACTGCAGAAAGAGCTTGTTAGAGGACTTCAATTAACTAGTGGTGGGACTCTAGTTGAACCTCCACTCAGCAATTCTAATTTTACACCTGCATATCCCCAAGGGGGAGACTTGACACCTCGTGTCCAAGAGGAGCAGAGTGACTACTCCAAGATTATGGCTtctaaaattatcaacaatgtCGCAAGTCCAAGGGAAAAGCTGGACACAACTGCATCATCAAATTCCGTGAAAATGGTCATCAAGAATGGAGTATTGATGCCCAAGCAGAAGCAGAGGAGGTACAGAACGGAAAAGCCATTTAGTTGTGAACATTGTTCTGCGAGGTTCACTCTGAGGAGTAATATGGAGAGACACATCAAGCAACAACATCCTCAGCACTGGAGTCAACGACCACGTGGTGGTCATTCAACAAGAGGGCGGCCTCCAACAAATCCACCCAGCTTGTTACACAGTCTCAATCATTCCAATCAACAACTACAGCCAACTTATCCGAATATTCTACCGAAAATGGGTCAGACTACTGAGTATGGAAAACACGCCATTTCTGATCAAGTCAAGTACGCAATTCTTGCTCAGCAATTAAAAGGTAATAAACACGAGGAGAATGAGAGTGATGAAGAGTTGGTGATTGATGAAGCAGCTGATAAAGAATCAGAGAACCATGAAGAAGAGAGACCAATTAGTTTGCTGAGGGGAAAATTGGAGGAGACTGTAAAGGATTCCCATCGAATAATCCCTGAAGTCCCGTCAAAATCTGAAACTCCAATGGATCAAGATCCAGTGGATATGAAGATTAAAACAGACCCCGAAGAGACCAATGAATCGAAATCTAAACATTCAGATGATGaggaattgaatgaaaaaaagaggatcAAAGTAGAGGACGGAAGCGCAGATCTCGCAAGTGTATCCGAACTCCTGGACAATGCATCACAGCAGTACCAACAATTTCAGCCTCAGTATATGAGTGATGAAGAGGGATTAGTTGCTTCCACCAGTGACTGCAACAATTCTGgaagtgatgaaaaatcagACTCTGTTAATTCTGGAAACTCTGGCCACTCGTCctcatcaaaattgaaaaaattgaagaaaaaaaagaaaaagaagaagaagaagtcAGCGTACTCAATGGCACCAAACCGAGTCATTTGTCCATATTGTGAGCGCCCATTCCCATGGACTTCATCCCTGAGAAGGCACATATTAACTCACACTGGTCAAAAACCTTATCAGTGTGTCCATTGCTCTCTCCTCTTCACAACAAAGTCCAATTGTGATCGTCATTTGTTGAGAAAACACAAAGCAAATCCCaacaaaatgagaagaatCAGAAATTCATCATCACCAGAGGCTCAAGAAGTTCCAACAAATAACAATGGTACATTCTCCATGAGAAATGTACCAGAACGACCATACAAATGCAATCAATGCCCCAGCTCCACATTTTCCACTCTCGGTAACCTGAAAAAGCACAAATCAACTAAACACTCGCATGGAGATAAATCCAGGCCTGAAAGTCCAATGAGCGAGGCACATTCAGAGAGGCAAAACAGTCCAGCGCCAACTGGTAAACAGAACGACCAGAGTGGATACGAGAGTCAATCTTCAAGTGTTTCTGAGAATATGGAGCAGTCGTCTGCCATCACTGAAGTGCCTAAATCCACTCTCAATACTTCTTCATCTGCCAATGAAACCCCTCGATCTCGTAGACCCTCACCACGTGAATCACCTGGACCTACTGATGCACCATTCAAGTGCCACCTCTGTGACAGTGGATTTGCCGAGCGTCAGGATTGCTTGGAACACATCAAAGATAATCACAAGCGATCCTACGAGATGTTATTGGCTAAAGGAGCACTAGATATGGACACTGAGAACCCCGAGGAGCACCAACCCCCCTCATCTCAATCTCATCACAGTGatggagaagagaaaagaggCAGATTTCCTGATTACAGTAACAGAAAAGTAGTTTGTGCATTCTGTATGCGTCGTTTCTGGTCAGCTGAGGATCTTCGACGTCATATGCGCACCCACACAGGTGAACGTCCATTCTCCTGTGACATATGCTCCAGGCGTTTCACCCTGAAACACAGTATGCTTCGTCATCGCAAAAAACACGAGTCTGTCGATTCAACAATGTACGTAGGCACAAGTGGTGATGAAGAATCAGCTCCCACTCAGCCACCAACGATAACACCACGAACCCAACAATCACCCCTTATCTCTGTGGCAACTGGTGACTCCAGAATCAGAGAAAGAATCTCACTACCAACAGTGGCAACAATAGCCACTGGTGATGCAGCACCCAACAGTTTGATGCGATTTAATCCCTACGAGAAACTAGCAACAATAACAGGTAAACTGActaattcccaaaattttaGCTCTGATTCAACACTAGATAACGAGAATGATCTGATCTCCAATTTACTGGGTATAAGAGACAAAAGTATCATTGATAAAGTGTTGCAAGCTTCTGCTGATGATGCAGCAAAACTTCTTGGTGTTAATAGGAGTCATGAATAA
Protein Sequence: MDCSTKVTIENIPDQQNNSETHTDAASTSSVEQLEGTYPCPACSLILTSSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPATRRHVDEYNNNEIAKRSSPDIVDSVSPASRSKRKRSEFPDDIDIQRKHKILLNHSRSEGKNILQTTFMCPVCPSLDFPTGALLEAHLEKNHPDYTAECDTCNRSFKNHRVLNLHRFMVHFTDNSAPTRNLRNSVIGFNDLTFVDFSADKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALEAHEMDCGNSHYQATNLDDDHSKRNDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPIFPRSDASTPDQHIKMNPNVNSSGSSGTASSENNEEEAQDAFSAELRKMKLKGEFPCRLCSAIFPNLRALKGHHKEHMGVAPGMPYPCNVCPFTSTDKAALSRHLKSHNGVRPYQCSLCKYAFTTKANCERHVKNGHKILTREEIKSVLIYHANEDAVNEGLDRTSPRAIRDDARKSLVYPERNELQTHYSLNSRHSDMIAEEVRLRQLASLRATPVSHYEKSDVFSRPPPMHLLELSHRISEDSENPHDFTKSNYSKMHDEDSRSSDDSASLVNDAKSDAHQRAQASPIDMKSTSTGDDDAPLDLSMDVLDLSKKSKDNGTDSSMTDEFDKSQKEMYESATSQFLLTQALLKAGQSGNSPSSLEALYANAHLLYRNFGGFSGAGVGGGILPPYLFNPHIFGQDFAMRDRLQKELVRGLQLTSGGTLVEPPLSNSNFTPAYPQGGDLTPRVQEEQSDYSKIMASKIINNVASPREKLDTTASSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPSLLHSLNHSNQQLQPTYPNILPKMGQTTEYGKHAISDQVKYAILAQQLKGNKHEENESDEELVIDEAADKESENHEEERPISLLRGKLEETVKDSHRIIPEVPSKSETPMDQDPVDMKIKTDPEETNESKSKHSDDEELNEKKRIKVEDGSADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSGNSGHSSSSKLKKLKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRIRNSSSPEAQEVPTNNNGTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHKSTKHSHGDKSRPESPMSEAHSERQNSPAPTGKQNDQSGYESQSSSVSENMEQSSAITEVPKSTLNTSSSANETPRSRRPSPRESPGPTDAPFKCHLCDSGFAERQDCLEHIKDNHKRSYEMLLAKGALDMDTENPEEHQPPSSQSHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPTQPPTITPRTQQSPLISVATGDSRIRERISLPTVATIATGDAAPNSLMRFNPYEKLATITGKLTNSQNFSSDSTLDNENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00728833;
90% Identity: iTF_01273292; iTF_01273992; iTF_00438282;
80% Identity: -