Basic Information

Insect: Psyttalia lounsburyi
Gene Symbol: RREB1
Assembly: GCA_030522865.1
Location: JAPYZN010000170.1:16767-27505[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0024 0.39 12.2 0.1 1 23 38 60 38 60 0.98

2 16 0.00015 0.025 16.0 0.3 1 23 74 96 74 96 0.98

3 16 2e-07 3.3e-05 25.0 1.3 1 23 102 125 102 125 0.98

4 16 1.4 2.3e+02 3.5 0.0 1 23 212 236 212 236 0.93

5 16 0.018 3 9.4 2.7 2 23 242 264 242 264 0.94

6 16 0.13 21 6.8 0.4 1 20 318 337 318 339 0.94

7 16 0.089 15 7.3 0.5 1 23 449 471 449 471 0.97

8 16 0.00013 0.022 16.2 0.2 1 23 480 502 480 502 0.98

9 16 0.002 0.33 12.5 2.8 1 23 508 531 508 531 0.96

10 16 0.00057 0.096 14.2 2.8 1 23 907 930 907 930 0.96

11 16 0.00057 0.096 14.2 0.1 3 23 1192 1212 1190 1212 0.97

12 16 0.51 85 4.9 6.0 1 23 1218 1241 1218 1241 0.97

13 16 0.0036 0.6 11.7 2.2 1 23 1280 1304 1280 1304 0.97

14 16 3.7 6.2e+02 2.2 2.5 1 23 1392 1415 1392 1415 0.89

15 16 0.0098 1.6 10.3 0.4 2 23 1466 1487 1465 1487 0.94

16 16 0.0034 0.57 11.7 5.5 1 23 1493 1515 1493 1515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0024	0.39	12.2	0.1	1	23	38	60	38	60	0.98
2	16	0.00015	0.025	16.0	0.3	1	23	74	96	74	96	0.98
3	16	2e-07	3.3e-05	25.0	1.3	1	23	102	125	102	125	0.98
4	16	1.4	2.3e+02	3.5	0.0	1	23	212	236	212	236	0.93
5	16	0.018	3	9.4	2.7	2	23	242	264	242	264	0.94
6	16	0.13	21	6.8	0.4	1	20	318	337	318	339	0.94
7	16	0.089	15	7.3	0.5	1	23	449	471	449	471	0.97
8	16	0.00013	0.022	16.2	0.2	1	23	480	502	480	502	0.98
9	16	0.002	0.33	12.5	2.8	1	23	508	531	508	531	0.96
10	16	0.00057	0.096	14.2	2.8	1	23	907	930	907	930	0.96
11	16	0.00057	0.096	14.2	0.1	3	23	1192	1212	1190	1212	0.97
12	16	0.51	85	4.9	6.0	1	23	1218	1241	1218	1241	0.97
13	16	0.0036	0.6	11.7	2.2	1	23	1280	1304	1280	1304	0.97
14	16	3.7	6.2e+02	2.2	2.5	1	23	1392	1415	1392	1415	0.89
15	16	0.0098	1.6	10.3	0.4	2	23	1466	1487	1465	1487	0.94
16	16	0.0034	0.57	11.7	5.5	1	23	1493	1515	1493	1515	0.98

Sequence Information

Coding Sequence: ATGGATTGCTCTGCAAAAGTGGCCATCGAGAATATTCCGGACCAGCGACACAGTAGTGAAACACAGACCGATGCCGCATCAACTTCATCGGTTGAGCAATTGGAGGGATCTTACCCCTGTCCTGCCTGTTCTCTCGTGCTAACTTCATCTCGTGACCTGACAAATCACCTTCGAGGTCACAATTCACCCCGCAGCACTGACTACAGCGGTGAGGAGGACTACTCCTGTGGTGTATGTCACAAAGTCTTAAGCTCAGCGAGTTCCCTGGATCGTCACGTACTAGTACACTCCGGTGAGCGTCCATTCAAGTGCAAATACTGCGACATGGCATTTACAACAAATGGAAATATGAATAGACACCTGAGAACGGCACATCGTGAAGTGTCACCTCACAGTTACACGGATTCCGAAGGTAGCAGTGACTCGGAGAGGCCGGCAACAAGGCGACACGTAGACGAGTACAACAACAATGAAATAGCTAAACGTAGTTCACCAGACCTAGTCGATCCAGTATCACCGGCTGCCAGATCAAAGAGAAAGAGGCCAGAGTTTTCTGATGACAGTGACATCCAGAGGAAACACAAAATCCTCCTTAATAATTCGAGAATCGACGGAAAGAATATTCTCCAGAGCTACATGTGTCCAGTCTGCCCCTCCCTGGACTTCCCCACAGGAGCTCTCCTTGAAGCCCACCTAGAGAAGAATCACCCTGACTACACAGCAGAGTGTGACACCTGCAACCGATCGTTCAAGAACCATCGAGTCCTGAATCTCCACAGATTCATGGTCCACTTTACTGAGACCTCACCACCTCCGCGAAACCTCCGAAACTCTGTAATAGGGTTCAATGACTTGACCTTCGTCGACTTTTCCGCTGACAAATTCCCAGCAATAGCCAGAGCAGTCTGCGAACAGTCTCTTCATCGTCCAGCTTCAGGTGAGAGTGCAACATTTCAGTGCTCAAAGTGCCTCCGTGCATTCCCCTGTAAATCCGCATTGGAAGCTCACGAAATGGATTGTGGAACTTTGCATTATCAAACCTCCCATGTGGAAGATGATCATTCTAAGAGAAACAACTTTTTCGCTGGATTAGATCTACAGAATAAAGCGGCTATGACCGAAGCCAAGGAGGGAAAAGACCTGGCGGACATTCAGAGCATTATTTCCGTGACATCTGGACCAATATTTCCACGATCTGATGCCAGCACTCCCGATCAACACATCAAGATGAATCCAAATGTCAATTCCTCTGGCTCTTCAGGAACTGCTTCGTCTGAGAATAACGAAGAAGAGGCTCAAGATGCATTTTCCGCTGAATTGAGGAAAATGAAGCTCAAGGGTGAATTCCCATGTCGATTATGTAGCGCCATATTTCCGAATCTGAGAGCCTTGAAAGGTCACCATAAAGAGCACATGGGAGTTGGTCCAGGGATGCCCTATCCCTGCAACGTCTGTCCCTTCACTTCAACGGATAAAGCAGCCCTCAGTCGCCACCTGAAGTCTCACAATGGTGTTCGTCCTTACCAGTGCTCCCTCTGCAAATATGCCTTTACAACAAAAGCAAATTGCGAAAGACACGTTAAGAATGGTCACAAGATCATGACCCGAGAGGAGATAAAGAGTGTTCTCATTTATCACGCAAGTGAGGACGCAGCCAATGAAGGCCTTGACAGAACGTCACCTAGAGCCATCAGAGATGATGCTCGCAAATCTCTAGTCTATCCTGAGCGGGATGAGCTTCAGTCCCAGCCCCACTATCCTCTCAACTCTAGACATTCCGATCTGATTGCCGAAGAGGTGAGACTACGTCAATTAGCATCGATGCAAGCGACACCAGTTAGCCATTACGAGAAATCTGATGTTTTTTCAAGACCACCACCGATGCACCTCCTAGAGCTGTCCCACAGGATGTCCGAAGACTCCGAGAATCCTCAGGACTTTACAAGATCAAATTACTCGAGAATGCAGGAAGAAGACTCAAGATCGTCCGACGAAAGCGCATCGCTTGCCAACGATGTCAATTCCGACGCACATCAAAGAGCTCAGGCTAGTCCAATTGACCTAAAGAGTACCTCAACGGGTGCATCATCAGATGCCCCTCTGGATTTATCGATGGACGCTCTCGATCTGAGTAAGAAAGCAAAGggcaatggaattgatttatCGACGACTGATGAGTTCGATAAAAGCCAGAAGGACATGTACGAGTCAGCAACAAATCAACTTCTCTTGACTCAGGCCCTTCTCAAAGCCGGTCAATCTGGAAATTCACCGAGCTCTCTGGAAGCCCTCTACGCAAACGCTCACTTACTTTATCGAAACTTTGGTGGCTTCCCAGGCACTGGAGTGGGGGGAGGAATTCTGCCACCTTATCTGTTCAATCCACATATTTTTGGTCAGGATTTTGCCATGAGAGATAGACTTCAGAAGGAGTTGGTTAGAGGTCTTCAGCTGACCAGTGGAGGAACGCTAGTAGAGCCTCCGCTTAACAATGCAAGTTTCCCACCTGGTTACCCCCACGGACGAGACTTGGCCTCACGATCTCATGAGGAGCAGAACGACTACTCCAAGATCATGGCTTCGAAAATTGTCAACAAAGTTGCAAGCCCACGTGAGAAAATGGATACAACACCGACTTCGAATTCCGTGAAGATGGTAATCAAGAATGGAGTATTAATGCCAAAGCAGAAACAGAGGAGATACAGAACTGAGAAGCCCTTCAGTTGTGAACATTGCTCAGCAAGATTCACCCTTAGGAGTAACATGGAGAGACATATTAAACAACAACATCCCCAGCACTGGAGTCAAAGGCCTCGTGGTGGGCATTCAACAAGAGGCCGACCACCAACAAATCCTCCGTCCTTGTTGCACGGTATGAATCACTCCAATCAACCTCTTCAGCCAACTTATCCCAATATTCTACCGAAAATAGGACAGTCTTCTGAATATGGAAAACATGCAATCTCTGATCAAGTTAAGTATGCCATTCTCGCTCAGCAGTTGAAGGGGAACAAACACGAAGAGAACGATACAGATGAGGAGTTGATAATTGATGAAGGAGTTGATAAAGAATCAGATAACCATGAGGAGGAGAGACCAATCAGCCTGTTGAGAGGAAAGTTGGAGGAGAGTGTGAGAGATTCCAACAGGGAAAACAATGAGCCTCTCTCGAGCTCTGATACTGGAATGGATCAGGATCCAATAGCCATAAACATAAAGCCCGAACCAGAAGAGATCAATGAATCAAAGCCGAAACCGTCGGACGACGAAGAGATGCCTGAGAAAACGAGTGTCAAAGGAGAAGACGGAAATGCTGACCTGGCGAGTGTGTCAGAACTTCTGGACAATGCATCTCAACAGTACCAGCAGTTCCAGCCCCAATACATGAGTGATGAAGAGGGCTTGGTTGCGTCGACCAGTGACTGCAACAATTCCGGAAGTGACGAGAAATCCGACTCCGTTAATTCTGCAAACTCGGGCAATTCGTCGTCGTCAAAACTTaagaaactcaaaaaaaagaagaagaagaagaagaagaagtcTGCATATTCAATGGCACCTAATCGAGTGATCTGCCCATACTGCGAGCGCCCATTCCCTTGGACTTCATCTCTACGGAGACACATTTTAACCCACACTGGTCAGAAACCCTACCAGTGTGTCCACTGCTCTCTCCTTTTCACCACAAAATCCAACTGCGATCGTCATCTCTTGAGAAAGCACAAGGCCAATCCCAATAAGATGAGAAGAGTCAGGACCTCATCATCCCCAGAAGCCCAAGAAGTATCTACAAACAACAATGGTTCATTCTCCATGAGAAATGTACCCGAGCGACCCTACAAATGCAATCAATGCCCGAGTTCTACATTCTCAACCCTCGGCAATCTTAAGAAACACAGATCGACCAAGCACTCCAACGAGGAGAAGTCCAGACCAGAGAGTCCAATGAGTGAAGCCCATTCAGAAAGACAAAACAGTCCTGTGCCAACGAGCAAACAAAATGACCAGAGTGGCTACGAGAGTCAGTCGTCAAGTGTTTCAGAGAATCTTGAGCAGTCAGCGGCCCCCATCGAAGTCTCCAAATCTACTCTAAACACCTCCTCATCAGCCAATGAGACTCCGAGATCGCGGCGACCCTCACCACGGGCCTCCCCTGGGCCGACAGACGCCCCCTTCAAGTGCCACCTCTGCGACAGTGGATTTGCCGAGCGTCAAGATTGCTTGGAGCACATCAAGGAAAATCACAAGCGATCTTACGAGATGTTGCTGGCTAAGGGAGCTTTGGACATGGAAACTGAAAACCTCGAGGAGCAGCAACCACCTCCATCCCAATCGCATCACAGCGATGGAGAGGAGAAACGAGGAAAATTCCCTGACTATAGTAACAGAAAAGTTGTGTGTGCTTTCTGCATGCGTCGTTTCTGGTCAGCTGAGGATCTTCGTCGTCACATGCGCACTCACACTGGTGAGCGTCCTTTCTCCTGTGACATTTGCTCCAGGCGTTTTACGCTGAAGCACAGCATGCTTCGCCACCGTAAGAAGCATGAGTCAGTCGATTCGACGATGTACGTCGGCACCAGTGGTGACGAGGAATCAGCTCCCACTCAGCCACCAACGATAACACCTAGAACCCAACAACAGACTCCTCTCATCTCAGTCACCACTGGAGAGTCCAGAATGCGGGAAAGAATCTCTCTGCCTACAGTGGCAACAATTGCCACTGGTGACGCAGCCCCCAGCAGCTTGATGAGATTCAATCCTTACGAAAAACTGACAACACTAACAGGTAAACTAGCCAATGCTCAGAATTTTAGTTCTGAACAAACACCAGACAACGAGAACGATTTGATCTCCAACTTACTTGGTATAAGAGATAAAAGTATCATTGATAAAGTACTGCAAGCATCTGCTGACGATGCAGCCAAGCTTCTTGGTGTCAATAGAAGTCACGAATGA
Protein Sequence: MDCSAKVAIENIPDQRHSSETQTDAASTSSVEQLEGSYPCPACSLVLTSSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPATRRHVDEYNNNEIAKRSSPDLVDPVSPAARSKRKRPEFSDDSDIQRKHKILLNNSRIDGKNILQSYMCPVCPSLDFPTGALLEAHLEKNHPDYTAECDTCNRSFKNHRVLNLHRFMVHFTETSPPPRNLRNSVIGFNDLTFVDFSADKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALEAHEMDCGTLHYQTSHVEDDHSKRNNFFAGLDLQNKAAMTEAKEGKDLADIQSIISVTSGPIFPRSDASTPDQHIKMNPNVNSSGSSGTASSENNEEEAQDAFSAELRKMKLKGEFPCRLCSAIFPNLRALKGHHKEHMGVGPGMPYPCNVCPFTSTDKAALSRHLKSHNGVRPYQCSLCKYAFTTKANCERHVKNGHKIMTREEIKSVLIYHASEDAANEGLDRTSPRAIRDDARKSLVYPERDELQSQPHYPLNSRHSDLIAEEVRLRQLASMQATPVSHYEKSDVFSRPPPMHLLELSHRMSEDSENPQDFTRSNYSRMQEEDSRSSDESASLANDVNSDAHQRAQASPIDLKSTSTGASSDAPLDLSMDALDLSKKAKGNGIDLSTTDEFDKSQKDMYESATNQLLLTQALLKAGQSGNSPSSLEALYANAHLLYRNFGGFPGTGVGGGILPPYLFNPHIFGQDFAMRDRLQKELVRGLQLTSGGTLVEPPLNNASFPPGYPHGRDLASRSHEEQNDYSKIMASKIVNKVASPREKMDTTPTSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPSLLHGMNHSNQPLQPTYPNILPKIGQSSEYGKHAISDQVKYAILAQQLKGNKHEENDTDEELIIDEGVDKESDNHEEERPISLLRGKLEESVRDSNRENNEPLSSSDTGMDQDPIAINIKPEPEEINESKPKPSDDEEMPEKTSVKGEDGNADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGNSSSSKLKKLKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRTSSSPEAQEVSTNNNGSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSNEEKSRPESPMSEAHSERQNSPVPTSKQNDQSGYESQSSSVSENLEQSAAPIEVSKSTLNTSSSANETPRSRRPSPRASPGPTDAPFKCHLCDSGFAERQDCLEHIKENHKRSYEMLLAKGALDMETENLEEQQPPPSQSHHSDGEEKRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPTQPPTITPRTQQQTPLISVTTGESRMRERISLPTVATIATGDAAPSSLMRFNPYEKLTTLTGKLANAQNFSSEQTPDNENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00728833;
90% Identity: iTF_00351373;
80% Identity: -