Basic Information

Insect: Psyttalia concolor
Gene Symbol: RREB1
Assembly: GCA_030522845.1
Location: JAPYZM010000044.1:28465-34141[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0025 0.42 12.2 0.1 1 23 45 67 45 67 0.98

2 16 0.00016 0.026 16.0 0.3 1 23 81 103 81 103 0.98

3 16 2.1e-07 3.5e-05 25.0 1.3 1 23 109 132 109 132 0.98

4 16 1.4 2.4e+02 3.5 0.0 1 23 219 243 219 243 0.93

5 16 0.019 3.2 9.4 2.7 2 23 249 271 249 271 0.94

6 16 0.13 22 6.8 0.4 1 20 325 344 325 346 0.94

7 16 0.094 16 7.3 0.5 1 23 456 478 456 478 0.97

8 16 0.00014 0.023 16.2 0.2 1 23 487 509 487 509 0.98

9 16 0.0021 0.34 12.5 2.8 1 23 515 538 515 538 0.96

10 16 0.0006 0.1 14.2 2.8 1 23 914 937 914 937 0.96

11 16 0.0006 0.1 14.2 0.1 3 23 1199 1219 1197 1219 0.97

12 16 0.54 90 4.9 6.0 1 23 1225 1248 1225 1248 0.97

13 16 0.0038 0.63 11.6 2.2 1 23 1287 1311 1287 1311 0.97

14 16 3.9 6.5e+02 2.2 2.5 1 23 1399 1422 1399 1422 0.89

15 16 0.01 1.7 10.3 0.4 2 23 1473 1494 1472 1494 0.94

16 16 0.0036 0.59 11.7 5.5 1 23 1500 1522 1500 1522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0025	0.42	12.2	0.1	1	23	45	67	45	67	0.98
2	16	0.00016	0.026	16.0	0.3	1	23	81	103	81	103	0.98
3	16	2.1e-07	3.5e-05	25.0	1.3	1	23	109	132	109	132	0.98
4	16	1.4	2.4e+02	3.5	0.0	1	23	219	243	219	243	0.93
5	16	0.019	3.2	9.4	2.7	2	23	249	271	249	271	0.94
6	16	0.13	22	6.8	0.4	1	20	325	344	325	346	0.94
7	16	0.094	16	7.3	0.5	1	23	456	478	456	478	0.97
8	16	0.00014	0.023	16.2	0.2	1	23	487	509	487	509	0.98
9	16	0.0021	0.34	12.5	2.8	1	23	515	538	515	538	0.96
10	16	0.0006	0.1	14.2	2.8	1	23	914	937	914	937	0.96
11	16	0.0006	0.1	14.2	0.1	3	23	1199	1219	1197	1219	0.97
12	16	0.54	90	4.9	6.0	1	23	1225	1248	1225	1248	0.97
13	16	0.0038	0.63	11.6	2.2	1	23	1287	1311	1287	1311	0.97
14	16	3.9	6.5e+02	2.2	2.5	1	23	1399	1422	1399	1422	0.89
15	16	0.01	1.7	10.3	0.4	2	23	1473	1494	1472	1494	0.94
16	16	0.0036	0.59	11.7	5.5	1	23	1500	1522	1500	1522	0.98

Sequence Information

Coding Sequence: ATGCTACGAGGTCACTTGATAAAACGTATTATTGTCCCAGTGGCCATCGAGAATATACCGGACCAGCGACACAGTAGTGAAACCCAGACCGATGCCGCATCAACTTCATCGGTTGAACAATTGGAGGGATCTTACCCCTGTCCCGCCTGTTCCCTCGTGTTAACTTCATCTCGTGACCTGACAAATCACCTTCGAGGTCACAATTCACCCCGCAGCACTGACTACAGCGGTGAGGAGGACTACTCCTGTGGTGTATGTCACAAAGTCTTAAGCTCAGCGAGTTCCCTGGATCGTCACGTACTAGTACACTCCGGTGAGCGTCCATTCAAGTGCAAATACTGCGACATGGCATTTACAACAAATGGAAATATGAATAGACACCTGAGAACGGCACATCGTGAAGTATCACCTCACAGTTACACGGATTCCGAAGGCAGCAGTGACTCGGAGAGGCCGGCAACAAGGCGACACGTAGACGAGTACAACAACAATGAAATAGCTAAACGTAGTTCACCAGACCTAGTCGATCCAGTATCACCGGCTGCGAGATCAAAGAGAAAGAGGCCAGAGTTTTCCGATGACATCGACATCCAGAGAAAACACAAAATCCTCCTTAATAATTCGAGAATCGACGGAAAGAATATTCTCCCGAGCTACATGTGTCCAGTCTGCCCCTCCCTGGACTTCCCCACAGGAGCTCTCCTTGAAGCCCACCTAGAGAAGAATCACCCTGACTACACAGCAGAGTGTGACACCTGCAACCGATCGTTCAAGAACCATCGAGTCCTGAATCTCCACAGATTCATGGTCCACTTTACTGAGACCTCACCACCTCCGCGAAACCTACGAAACTCTGTAATAGGGTTCAATGACTTGACCTTCGTCGACTTTTCCGCTGACAAATTCCCAGCAATAGCCAGAGCAGTCTGCGAACAGTCTCTTCATCGTCCAGCCTCAGGTGAGAGTGCAACATTTCAGTGCTCAAAGTGCCTCCGTGCATTCCCCTGTAAATCCGCATTGGAAGCTCACGAAATGGATTGTGGAACTTTGCATTATCAAACCTCCCATGTGGAAGATGATCATTCCAAGAGAAACAACTTTTTCGCTGGATTAGATCTACAGAATAAAGCGGCTATGACCGAAGCCAAGGAGGGAAAAGACCTGGCGGACATACAGAGCATTATTTCCGTGACATCTGGACCAATATTTCCACGATCTGATGCCAGCACTCCCGATCAACACATCAAGATGAATTCAAATGTCAATTCCTCGGGCTCTTCAGGGACTGCTTCGTCTGAGAATAACGAAGAAGAGGCTCAAGATGCATTTTCCGCTGAATTGAGGAAAATGAAGCTCAAGGGTGAATTCCCATGTCGATTATGTAGCGCCATATTTCCGAATCTAAGAGCCTTAAAAGGTCACCATAAAGAGCACATGGGAGTTGGTCCAGGGATGCCCTATCCATGCAACGTCTGTCCCTTCACTTCAACGGATAAAGCAGCCCTCAGTCGCCACCTGAAGTCTCACAATGGTGTTCGTCCTTACCAGTGCTCCCTCTGCAAATATGCCTTTACAACAAAAGCCAATTGCGAAAGACACGTTAAGAATGGTCACAAGATCATGACCCGAGAGGAGATAAAGAGTGTTCTCATTTATCACGCAAGTGAGGACGCAGCCAATGAAGGCCTTGACAGAACGTCACCTAGAGCCATCAGAGATGATGCTCGCAAATCTCTAGTCTATCCTGAGCGGGATGAGCTTCAGTCCCAGCCCCACTATCCCCTCAATTCTAGACATTCCGATCTGATTGCCGAAGAGGTGAGACTACGTCAATTAGCATCGATGCAAGCGACACCAGTTAGCCATTACGAGAAATCCGATGTTTTTTCAAGACCACCACCGATGCACCTCCTAGAGCTGTCCCACAGGATTTCCGAAGACTCTGAGAATCCTCAGGACTTTACAAAATCAAATTACTCGAGAATGCAGGAAGAAGACTCAAGATCGTCCGACGAAAGTGCATCACTTGCCAACGATGTCAATTCCGACGCACGTCAAAGGGCTCAGGCTAGTCCAATTGACCTAAAGAGTACCTCAACAGGTGCATCATCAGATGCCCCTCTCGATTTATCAATGGACGCTCTCGATCTGAGTAAGAAAGCAAAGGGCAATGGGATTGATTTATCGACAACTGATGAGTTCGATAAAAACCAGAAGGACATGTACGAGTCAGCAACAAATCAACTTCTCTTGACTCAGGCCCTTCTCAAAGCCGGTCAATCTGGAAATTCACCGAGCTCTTTGGAAGCCCTCTACGCAAACGCTCACTTACTTTATCGAAACTTTGGTGGCTTCCCAGGCACTGGAGTGGGGGGAGGAATTTTACCACCTTATTTGTTCAATCCACATATTTTTGGTCAGGATTTTGCCATGAGAGATAGACTTCAGAAGGAGTTGGTTAGAGGTCTTCAGCTGACCAGTGGCGGAACGCTAGTAGAGCCGCCGCTTAACAATGCAAGTTTCCCACCTGGTTACCCCCATGGACGAGACTTGGCCTCACGATCTCATGAGGAGCAGAATGACTACTCTAAAATCATGGCTtcgaaaattatcaataaagttGCAAGCCCACGTGAGAAAATGGATACAACACCGACTTCGAATTCCGTGAAAATGGTAATCAAGAATGGAGTATTAATGCCAAAGCAGAAACAGAGGAGATACAGAACTGAGAAGCCCTTCAGTTGTGAACATTGCTCAGCAAGATTCACCCTTAGGAGTAATATGGAGAGACACATTAAACAACAACATCCCCAGCACTGGAGTCAAAGGCCTCGTGGTGGGCATTCAACAAGAGGCCGACCACCAACAAATCCTCCGTCCTTGTTGCACGGAATGAATCACTCCAATCAGCCTCTGCAGCCAGCTTATCCCAATATTCTACCGAAAATAGGACAGTCTTCTGAATATGGAAAACATGCAATCTCTGATCAAGTTAAGTATGCCATTCTCGCTCAGCAGTTGAAGGGGAACAAACACGAAGAGAACGACACAGATGAGGAGTTGATAATTGATGAAGGAGTTGATAAAGAATCAGATAACCATGAGGAGGAGAGACCAATCAGCCTGTTGCGAGGAAAGTTGGAGGAGTGTGTGAGAGATTCCAACAGGGAAAACAATGAGCCTCTCTCGAGCTCTGATACTGGAATGGATCAGGATCCAATAGCCATAAACATAAAGCCCGAACCAGAAGAGATCAATGAATCAAAGCCGAAACCGTCGGACGACGAAGAGATGCCTGAGAAAATGAGTGTCAAAGGAGAAGACGGAAATGCTGACTTGGCGAGTGTTTCAGAACTTCTGGACAATGCATCTCAACAGTACCAGCAGTTCCAGCCCCAATACATGAGTGATGAAGAGGGCTTGGTTGCGTCGACCAGTGACTGCAACAATTCCGGAAGCGACGAGAAATCCGACTCCGTTAATTCTGCAAACTCTGGCAATTCGTCGTCGTCAAAACTTaagaaactcaaaaaaaagaagaagaagaagaagaagaagtcTGCATATTCAATGGCACCTAATCGAGTGATCTGCCCATATTGCGAGCGCCCATTCCCTTGGACTTCATCCCTACGGAGACACATCTTAACCCACACTGGTCAGAAACCCTACCAGTGTGTCCACTGCTCTCTCCTTTTCACCACAAAATCCAACTGCGATCGTCATCTCTTGAGAAAGCACAAGGCCAATCCCAATAAGATGAGAAGAGTCAGGACCTCATCATCCCCAGAAGCCCAAGAAGTATCTACAAACAACAATGGTTCATTCTCCATGAGAAATGTACCCGAGCGACCCTACAAATGCAATCAATGCCCGAGTTCTACATTCTCAACCCTCGGCAATCTTAAGAAACACAGATCGACCAAGCACTCAAACGAAGAGAAGTCCAGACCAGAGAGTCCAATGAGTGAAGCCCATTCAGAAAGACAAAACAGTCCTGTGCCAACGAGCAAACAAAATGACCAGAGTGGCTACGAGAGTCAGTCGTCAAGTGTTTCAGAGAATCTTGAACAGTCAGCGGCCCCCATCGAAGTCGCCAAATCTACTCTAAATACCTCCTCATCAGCCAATGAGACTCCGAGATCGCGGAGACCCTCACCACGGGCCTCCCCTGGGCCGACAGACGCCCCCTTCAAGTGCCACCTTTGCGACAGTGGATTTGCCGAGCGTCAAGATTGCTTGGAGCACATCAAGGAAAATCACAAGCGATCTTACGAGATGCTACTGGCTAAGGGAGCTTTGGACATGGAAACTGAAAACCTCGAGGAGCAGCAACCACCTCCATCCCAATCGCATCACAGCGACGGAGAGGAGAAACGAGGAAAATTCCCTGACTACAGTAACAGAAAAGTTGTGTGTGCTTTCTGCATGCGTCGTTTCTGGTCAGCTGAGGATCTTCGTCGTCACATGCGCACTCACACTGGTGAGCGGCCTTTCTCCTGTGACATTTGCTCCAGGCGTTTTACGCTGAAGCACAGCATGCTTCGCCACCGTAAGAAGCATGAGTCAGTAGATTCGACGATGTACGTAGGCACCAGTGGTGATGAGGAATCAGCTCCCACTCAGCCACCAACGATAACACCTAGAACCCAACAGACTCCTCTCATCTCAGTCACCACTGGAGAGTCCAGAATGCGGGAAAGAATCTCTCTGCCTACAGTGGCAACAATTGCCACTGGTGACGCAGCCCCCAGCAGCTTGATGAGATTCAATCCTTACGAAAAATTGACAACACTAACAGGTAAACTAGCCAATGCTCAGAATTTTGGTTCTGAACAGACACCGGACAATGAGAACGATTTGATCTCCAACTTACTTGGTATAAGAGATAAAAGTATCATTGATAAAGTACTGCAAGCATCTGCTGACGATGCAGCCAAGCTTCTTGGTGTCAATAGAAGTCACGAATGA
Protein Sequence: MLRGHLIKRIIVPVAIENIPDQRHSSETQTDAASTSSVEQLEGSYPCPACSLVLTSSRDLTNHLRGHNSPRSTDYSGEEDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPATRRHVDEYNNNEIAKRSSPDLVDPVSPAARSKRKRPEFSDDIDIQRKHKILLNNSRIDGKNILPSYMCPVCPSLDFPTGALLEAHLEKNHPDYTAECDTCNRSFKNHRVLNLHRFMVHFTETSPPPRNLRNSVIGFNDLTFVDFSADKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALEAHEMDCGTLHYQTSHVEDDHSKRNNFFAGLDLQNKAAMTEAKEGKDLADIQSIISVTSGPIFPRSDASTPDQHIKMNSNVNSSGSSGTASSENNEEEAQDAFSAELRKMKLKGEFPCRLCSAIFPNLRALKGHHKEHMGVGPGMPYPCNVCPFTSTDKAALSRHLKSHNGVRPYQCSLCKYAFTTKANCERHVKNGHKIMTREEIKSVLIYHASEDAANEGLDRTSPRAIRDDARKSLVYPERDELQSQPHYPLNSRHSDLIAEEVRLRQLASMQATPVSHYEKSDVFSRPPPMHLLELSHRISEDSENPQDFTKSNYSRMQEEDSRSSDESASLANDVNSDARQRAQASPIDLKSTSTGASSDAPLDLSMDALDLSKKAKGNGIDLSTTDEFDKNQKDMYESATNQLLLTQALLKAGQSGNSPSSLEALYANAHLLYRNFGGFPGTGVGGGILPPYLFNPHIFGQDFAMRDRLQKELVRGLQLTSGGTLVEPPLNNASFPPGYPHGRDLASRSHEEQNDYSKIMASKIINKVASPREKMDTTPTSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPSLLHGMNHSNQPLQPAYPNILPKIGQSSEYGKHAISDQVKYAILAQQLKGNKHEENDTDEELIIDEGVDKESDNHEEERPISLLRGKLEECVRDSNRENNEPLSSSDTGMDQDPIAINIKPEPEEINESKPKPSDDEEMPEKMSVKGEDGNADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGNSSSSKLKKLKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRVRTSSSPEAQEVSTNNNGSFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSNEEKSRPESPMSEAHSERQNSPVPTSKQNDQSGYESQSSSVSENLEQSAAPIEVAKSTLNTSSSANETPRSRRPSPRASPGPTDAPFKCHLCDSGFAERQDCLEHIKENHKRSYEMLLAKGALDMETENLEEQQPPPSQSHHSDGEEKRGKFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPTQPPTITPRTQQTPLISVTTGESRMRERISLPTVATIATGDAAPSSLMRFNPYEKLTTLTGKLANAQNFGSEQTPDNENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00728833;
90% Identity: iTF_00351373;
80% Identity: -