Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010015527.1:28254-32800[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.14 16 6.8 2.9 1 23 297 319 297 319 0.97

2 19 0.034 3.8 8.8 0.5 2 23 355 376 354 376 0.94

3 19 0.0048 0.54 11.4 0.6 1 23 423 445 423 445 0.96

4 19 4.6 5.1e+02 2.1 0.1 2 23 449 470 448 470 0.92

5 19 2.3e-05 0.0026 18.7 1.8 2 23 516 537 515 537 0.97

6 19 0.0002 0.023 15.8 3.8 3 23 544 564 542 564 0.96

7 19 0.00057 0.063 14.4 0.8 1 21 570 590 570 594 0.92

8 19 5.8e-05 0.0064 17.5 2.3 1 23 654 676 654 676 0.98

9 19 0.00057 0.063 14.3 4.5 1 23 709 731 709 731 0.96

10 19 0.00027 0.03 15.4 0.7 1 20 736 755 736 757 0.94

11 19 0.0004 0.044 14.8 0.4 2 23 768 789 768 789 0.97

12 19 1.2e-05 0.0014 19.6 0.7 2 23 828 849 827 849 0.97

13 19 2.5e-05 0.0028 18.6 1.6 1 23 854 876 854 876 0.95

14 19 8.5e-05 0.0094 16.9 1.5 1 23 882 904 882 904 0.98

15 19 4.4e-06 0.00049 21.0 0.4 1 23 920 942 920 942 0.95

16 19 3.6e-07 4e-05 24.4 0.6 1 23 948 970 948 970 0.99

17 19 3.9e-05 0.0043 18.0 0.2 1 23 976 998 976 998 0.97

18 19 0.00014 0.016 16.2 4.1 1 23 1004 1026 1004 1026 0.96

19 19 0.01 1.1 10.4 0.4 1 20 1032 1051 1032 1053 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.14	16	6.8	2.9	1	23	297	319	297	319	0.97
2	19	0.034	3.8	8.8	0.5	2	23	355	376	354	376	0.94
3	19	0.0048	0.54	11.4	0.6	1	23	423	445	423	445	0.96
4	19	4.6	5.1e+02	2.1	0.1	2	23	449	470	448	470	0.92
5	19	2.3e-05	0.0026	18.7	1.8	2	23	516	537	515	537	0.97
6	19	0.0002	0.023	15.8	3.8	3	23	544	564	542	564	0.96
7	19	0.00057	0.063	14.4	0.8	1	21	570	590	570	594	0.92
8	19	5.8e-05	0.0064	17.5	2.3	1	23	654	676	654	676	0.98
9	19	0.00057	0.063	14.3	4.5	1	23	709	731	709	731	0.96
10	19	0.00027	0.03	15.4	0.7	1	20	736	755	736	757	0.94
11	19	0.0004	0.044	14.8	0.4	2	23	768	789	768	789	0.97
12	19	1.2e-05	0.0014	19.6	0.7	2	23	828	849	827	849	0.97
13	19	2.5e-05	0.0028	18.6	1.6	1	23	854	876	854	876	0.95
14	19	8.5e-05	0.0094	16.9	1.5	1	23	882	904	882	904	0.98
15	19	4.4e-06	0.00049	21.0	0.4	1	23	920	942	920	942	0.95
16	19	3.6e-07	4e-05	24.4	0.6	1	23	948	970	948	970	0.99
17	19	3.9e-05	0.0043	18.0	0.2	1	23	976	998	976	998	0.97
18	19	0.00014	0.016	16.2	4.1	1	23	1004	1026	1004	1026	0.96
19	19	0.01	1.1	10.4	0.4	1	20	1032	1051	1032	1053	0.89

Sequence Information

Coding Sequence: ATGGACGCCGAAGAGGTAAATACGTCGGAACCTCCGCAAAGTGAAGAAAATGTTGGAACCGTTGGTGAAATATGTCGAGTGTGTCTACTCGAGGGTTCGGAAATGCGGGATCTATTCATCGATGATCCAGTCGTCCCCCTGTCGAATAAAGCCATGAGCTTCACCACCGTTAAGATGATACCGGGAGACGGTCTGCCGGCTCAAGTCTGTCGTTCCTGTGCCGAGAAGCTGGAATCTGCCTATGAATTCAAACTGCAGGTGGAACAGGCTGACGGTATTTTGAGAGAGAAATACGATGCCTTGAGCATAAAGGAAGAGCTGTTCTTCAATGAGGTCGAAGTCGACTTGGATGAGAACACGGGACAGTCAGTTAGCACGCATATAGAACTCTGTGGGACATTGGACCAAGACGACGGAATCGACGCGGACACCGAATCAACCCTGCTAAAAGATAATCTGGCCCTGTTACAGGTTGCTAAATTAGCGGAAGCGGAGGAGGAGGCCAAAGATGTGGTCGAGGGGGAGGAAACTCCCCCCGAAACTATACGAATGGAAATTGACGTCGCTGGTATAGTGGCACAGGAGCACGGCTACGGAGCAATCCACAGATCCGTTAAGGAAGAGGAAGAATCTCTGGAGGAGGATTACAAAGAGGAAGAAAGCGGAGAGATCGATCGGGTCAAAGAGGAGGAGGTTTCGGACCAAAAATCGATCACTGACAAGAGTAACGAGCAATCGTCGCAGATTGAAGTACGAAAGAGTAAGAGAAAGTCAGCCAGGAGAGCGGCGATGCTCGATCACGACTCTGACGAGGATAACTACTTCGAAAATCTTAATTTAAGCTCCAGACTGAAACAGAGTCAGCCGGATAAGGCGGAGAAGGTTTTCTACATGTGTTACATATGCGACAAGCATTTCTTGGCCAAGGGGGTACTGAAAGAGCACATGCACTCCCATGAGGAGGTGAGGAAAGCGATATCGCTGATAAAGGTGCCTGAAAAGAGCCAGAAGCCCGTCGCCCCTTTGCCAACGAAGCATTCTCCCTCCGGTAAACAGCCCAACAAATGCCCCTACTGCGGGAAGGAGTATCTTTACGTTATTTCCTACAATAAACACCTGAAGCAGCACGAAAACGAGAAAGAAGACACCAAGGTGGAGCCGATGCCTTTGGAAGTATCTTTCCACGAGGATGACAACACCCTCGACTTTGATAACTACGATAATAGCTACGACTCGGACCCCGACTACAAAGACGAAGGGGAAGAGCACAGCTGCGTCAAGTGCGACGAGATTCTTGGCACCAAGAAAGCCCTGGAGAAACATATGGTCAGACACGAGATCCTGAAGTGCAGCGTTTGCGAGGTGGAGACCGAGGGGCTCGAAGCGTTCAAGACTCACAGATCGGAGCACGTCGCCGAGGGTGTACTCACCGAGGAAGATCTGAAGGAAGACATCAAGGCGGTGGTGCAGTTGAGGGAGAATATCAAGGACGAGGACGAGGATGAGAAGACGAGTAGAAAAACGAGACATTCCGAGAAGGGTTTGCGCTGTCCCAAGTGCCCGATGGTGTATTCTCACAAAAAGTCGCTGTCCAGACATCTGGAGACCCACAAGGGTACAAAATACGGGTGTAAATCCTGCAGCCAACAGTTTACGAGGAAAGATCACCTCAGGAGACACATGGAACAGCACGTTAGAATGAAATCCTTCAAATGCACGCAGTGCAACAAGACTTTTGGGAACGAATTGACTCTGCGAAATCATCTGATAGCCACTAATCACAAGACTATCATCTGCGGAGAGGAATACGACCCCAATAAACGGTTGAAACGGGTGGCCGCTAAGGAGGCTCAGAAGATAATCGACAAAATCAAGACAGAAGACGACGTGGATGACGAAAACGAGACCAGCGACGACGGGGAGATAAAAAGACCGAAGAAACATTACGAGAAGAAAGAATACGAGTGCGCAACGTGTAACAAAAAATGCGCCTCCAAACAGTCTCTGACTAAGCACATGGAAGTTCACATCAAAGAGGAGAAAGGGGAGAAGGAGAAGGAGATGAACCGAGGTTCCGACGACGATTCGGACTTTGACGGAGGTCTGGACTGGCCTATGGACAACCACGAGTGTCTGACTTGCAAGAAGAGATACAGCACGAAAAAATCCCTCCTGAGACACCAGCTGCTGCACGAAGAGCCCAACTTCGAGTGCGACATTTGCAACGTCAAGTTTTACAGGAAAGACAAGCTGAAAGCACACTACGATAAATGCTCCGAGAAAAACCCCGACCAAGTTAGGAAATGCAATATCTGCGGAGACAGCTTCGATAACAACGATCTGCTCAAGGAGCACAGAGCTAAGCACGTGACGGAGGGAATTCTGACGGAGGAAGACCTCAGGGACATCGAGCCGCAGGTCGAGGAGAGAAAACCGGGTGAAAAGATAACGAGAAAAAGGAGAACCGACATCGTTGGACTCGAATGTACGGAGTGCAACAAACGCTACACTTCCAGGAAGGGTCTGCTACGTCACATACAAGTTCACGAGGGCAAAAAATACCTCTGCGATATTTGTCCGAAGAAATTTTACAGGAGAGAACATCTAAAGATACACGTAGCCAAACACAACATGATAAAACCTTACAAATGCGATCGTTGCACCAAGCGATTTGCCAAAGAAGAACAACTCATCAATCATCTGTCGAAACACGACAGGAATTTCAAAAAGAACAAAGAAACCGATAGCTCTAAGAGATTCCTGTGCGAAATATGCTCAAAGAGTTTCACCCAGTCGACCACCTTGATTGCTCATCTCAGAGCTCACAACGGGATAAAACCCTACGTGTGCGAAGTCTGCTCGAGACCGTTCACCACCAACGCTTATCTCAAGATGCACATGAGAACCCACACGCAGGAAAGACCTTACATTTGCCAGTATTGTTCGAGAGCATTTGCGAGGGCCGATACTCTGGCGAATCACCTGACGTCTCACACCGGGGAGGCGAAATACCACTGCAAATATTGTCCCAAGAATTTCAGAAGGCTTAAATCCCTCAAGGAACACGTTTTCATTCACACAGGCCAAAGGCCTTACGCTTGTCCCACGTGCGATCGAAGGTTCAACAACAACGGAAGTAGATACGCGCACAGTAAAAGGTGCAAGCAAAATTTGTTACAGAATCAAAACAGGGGAGGTCAGAATTCGAATGCTAATCAAGTCAGGATTGGCAATCAGATCCAAAATATCAAGCCTCAGAACGTTAAGACGATCACGTTAAACAGACAAGCGGACAGCGTAACGGCTCAGCAGGTCATACAGCATCAGGAAATTTTGATGCCTTTGATATTGCCTCTGACTGTAACGCTCGCCGATGTCGGGGAGGAGGTCATTTTACCCGAGGGTACGAAGATTTATACCACTTCGTAA
Protein Sequence: MDAEEVNTSEPPQSEENVGTVGEICRVCLLEGSEMRDLFIDDPVVPLSNKAMSFTTVKMIPGDGLPAQVCRSCAEKLESAYEFKLQVEQADGILREKYDALSIKEELFFNEVEVDLDENTGQSVSTHIELCGTLDQDDGIDADTESTLLKDNLALLQVAKLAEAEEEAKDVVEGEETPPETIRMEIDVAGIVAQEHGYGAIHRSVKEEEESLEEDYKEEESGEIDRVKEEEVSDQKSITDKSNEQSSQIEVRKSKRKSARRAAMLDHDSDEDNYFENLNLSSRLKQSQPDKAEKVFYMCYICDKHFLAKGVLKEHMHSHEEVRKAISLIKVPEKSQKPVAPLPTKHSPSGKQPNKCPYCGKEYLYVISYNKHLKQHENEKEDTKVEPMPLEVSFHEDDNTLDFDNYDNSYDSDPDYKDEGEEHSCVKCDEILGTKKALEKHMVRHEILKCSVCEVETEGLEAFKTHRSEHVAEGVLTEEDLKEDIKAVVQLRENIKDEDEDEKTSRKTRHSEKGLRCPKCPMVYSHKKSLSRHLETHKGTKYGCKSCSQQFTRKDHLRRHMEQHVRMKSFKCTQCNKTFGNELTLRNHLIATNHKTIICGEEYDPNKRLKRVAAKEAQKIIDKIKTEDDVDDENETSDDGEIKRPKKHYEKKEYECATCNKKCASKQSLTKHMEVHIKEEKGEKEKEMNRGSDDDSDFDGGLDWPMDNHECLTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFDNNDLLKEHRAKHVTEGILTEEDLRDIEPQVEERKPGEKITRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCDRCTKRFAKEEQLINHLSKHDRNFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQNQNRGGQNSNANQVRIGNQIQNIKPQNVKTITLNRQADSVTAQQVIQHQEILMPLILPLTVTLADVGEEVILPEGTKIYTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718801; iTF_01200364; iTF_00060526; iTF_01048368; iTF_01049094; iTF_01414385; iTF_00938931; iTF_00939792; iTF_01412538; iTF_01303641; iTF_01413603; iTF_01411737;
90% Identity: iTF_00718801;
80% Identity: -