Basic Information

Insect: Tenthredo scrophulariae
Gene Symbol: -
Assembly: GCA_963978835.1
Location: OZ022228.1:27535471-27539929[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.14 18 6.8 2.9 1 23 308 330 308 330 0.97

2 19 0.038 4.8 8.6 0.5 2 23 365 386 364 386 0.94

3 19 0.0011 0.14 13.5 1.6 1 23 433 455 433 455 0.97

4 19 0.56 70 4.9 0.1 2 23 459 480 458 480 0.93

5 19 2.4e-05 0.0029 18.7 1.8 2 23 526 547 525 547 0.97

6 19 0.00021 0.026 15.7 3.8 3 23 554 574 552 574 0.96

7 19 0.00058 0.072 14.3 0.8 1 21 580 600 580 604 0.92

8 19 0.00093 0.12 13.7 3.3 1 23 662 684 662 684 0.97

9 19 0.00058 0.073 14.3 4.5 1 23 715 737 715 737 0.96

10 19 0.00027 0.034 15.4 0.7 1 20 742 761 742 763 0.94

11 19 0.00047 0.058 14.6 0.5 2 23 774 795 774 795 0.97

12 19 1.3e-05 0.0016 19.6 0.7 2 23 834 855 833 855 0.97

13 19 2.5e-05 0.0032 18.6 1.6 1 23 860 882 860 882 0.95

14 19 8.7e-05 0.011 16.9 1.5 1 23 888 910 888 910 0.98

15 19 4.5e-06 0.00056 21.0 0.4 1 23 926 948 926 948 0.95

16 19 3.7e-07 4.5e-05 24.4 0.6 1 23 954 976 954 976 0.99

17 19 4e-05 0.0049 18.0 0.2 1 23 982 1004 982 1004 0.97

18 19 0.00015 0.018 16.2 4.1 1 23 1010 1032 1010 1032 0.96

19 19 0.01 1.3 10.4 0.4 1 20 1038 1057 1038 1059 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.14	18	6.8	2.9	1	23	308	330	308	330	0.97
2	19	0.038	4.8	8.6	0.5	2	23	365	386	364	386	0.94
3	19	0.0011	0.14	13.5	1.6	1	23	433	455	433	455	0.97
4	19	0.56	70	4.9	0.1	2	23	459	480	458	480	0.93
5	19	2.4e-05	0.0029	18.7	1.8	2	23	526	547	525	547	0.97
6	19	0.00021	0.026	15.7	3.8	3	23	554	574	552	574	0.96
7	19	0.00058	0.072	14.3	0.8	1	21	580	600	580	604	0.92
8	19	0.00093	0.12	13.7	3.3	1	23	662	684	662	684	0.97
9	19	0.00058	0.073	14.3	4.5	1	23	715	737	715	737	0.96
10	19	0.00027	0.034	15.4	0.7	1	20	742	761	742	763	0.94
11	19	0.00047	0.058	14.6	0.5	2	23	774	795	774	795	0.97
12	19	1.3e-05	0.0016	19.6	0.7	2	23	834	855	833	855	0.97
13	19	2.5e-05	0.0032	18.6	1.6	1	23	860	882	860	882	0.95
14	19	8.7e-05	0.011	16.9	1.5	1	23	888	910	888	910	0.98
15	19	4.5e-06	0.00056	21.0	0.4	1	23	926	948	926	948	0.95
16	19	3.7e-07	4.5e-05	24.4	0.6	1	23	954	976	954	976	0.99
17	19	4e-05	0.0049	18.0	0.2	1	23	982	1004	982	1004	0.97
18	19	0.00015	0.018	16.2	4.1	1	23	1010	1032	1010	1032	0.96
19	19	0.01	1.3	10.4	0.4	1	20	1038	1057	1038	1059	0.89

Sequence Information

Coding Sequence: ATGGACGCCGAAGAGGTAAATACGTCGGAACCTCCGcaaaacgatgaaaatatatcagCGGTTGTTGAAATATGTCGAGTGTGTTTACTCGAGGGTATAGAGATGCGAGATCTCTTTATGGAAAATGACGTCGTATCGTTATCCACAAAAGCTATGAGCTTCACGAACGCTAAGATGATACCGGGGGATGGCTTACCTGGACAAGTGTGTGTCTCCTGTGCTGCGGAATTAGATTCCACCTATGAATTCAAGCTCCAAGTAGAGCATGCCGATCGTATTCTGAGAAAGAGATATGTTTCGTTGAACATAAAagaggaattatttttcaacgaggTCGAAGTAGACTTGGAAACTAATCAAACCATCGAACAGAATCCAGAACAGTTATCGGACGGTCATATTCAGCTGAGCACAGAGTCGGATCAAGAGGACCAAGCGGATACGGAAATAGAATCATCACTGTTAAAAGACAATCTGGCACTCTTGCaggttgaaaaattggccGAAGCTGAACAGGAGGGTCTAGAAATGGTTGAAACTTTGCCAGGATCAATGGAACAGATAAGAATCGATCCTGGTAGCATCGTGGCTCAAGAACATGGCTATGTAGCGCAGCAGAAGTCGATTAAAGAGGAAGAACTACCTGCAGCAGGAGCTTCCAATAGTCAAGAGACCAAAAATTATGAAGAGGAGAGGGAGAATATTAAAGAGGAACGTTCAGAGCAGAAAATGGTCATTGAAAGTGTGGAGAGTCTGGCTTCTGAACAATCGATACAAATTGAAACTCGTAAAAGTAAGCGCAAGTCTGCTCGAAGAGTACCGATCCTTGATCATGATTCGGATGAAGATAActactttgaaaatttgaacttgAGCTCTCGGCTGAAACAGAGCCAGTCAGATAAAGCTGAGAAGGTTTATTACATGTGCTATATTTGCGATAAGCATTTTTTGGCCAAGGGTGTATTGAAGGAACACATGCACTCCCACGAGGAAGTTAGGAAAGTTATGTCGCTGGTAAAGGTGCCTGAAAAGACTGTGAAAGTTACGCCGTCTCCTACGAAGCATTCCCCGTCTGGAAAGCAGGCTAACAAATGTCCTTACTGCGGAAAAGAATATTTGTACATAATTTCGTATAACAAACATCTTAAGCAGCACGAAAATGATAAAGAAGAATCAAAGGTGGAGCCTATGCCGTTGGAAGTCTCGTTTCACGAGGATGATAACACTTTAGATTTTGATAACTACGATAACAGTTACGATTCAGATCCGGATTTTAACGAAGACAGCGAGGAACACACTTGCGAGAAATGCGAGGGTGTATTTAACACCAAAAAAGCACTAGACAAACACATGGTTAAACACGAAATTCTTAAATGCAGTATTTGCAATGAAGAATCCGAGGGACTAGAGGCGTTTAAAAATCACCGATCGGGACATGTTACTGAGGGTGTATTGACGGAAGAAGATCTGAAAGAAGATATTAAACAAGTTGTTCATTTGCAAGAAAGTACACAAGCAGAAGAGGCTGTTCAAGCTCGTAGAAAAACTAGGAATTCGGATGTGAAAGGGCTGAGATGTCCTAAATGTCCGATGGTATATTCTCACAAGAAGTCTTTATCAAGGCATCTTGAAACTCACACGGGAACAACGTACGGTTGTAAATCTTGCAGTCAACAATTTACTCGCAAAGATCACCTCAGAAGACACATGGAACAGCACGCTAGAATGAAATCGTTCAAATGTACCCAGTGCAACAAGACCTTCGGTAATGAATTGACTCTGAGAAATCATCTGATTGCAACTAATCACAAGACTATCATTCGCGGGGAAGAATACGACCCTAATAAACGGCTGAAGCGTGTGGCGGCTAAGGAAGCGCAGAAAATTATCGACAAAATTAAAACCGAGGACAATGCAGATGATAACGATAGCAGCGACGGCGGGGAAACACTGCAGAAGAAGACAtacgagaagaaagaatacGAGTGTGCAACTTGCAACAGAAAATGCGCTTCCAAACAGTCTTTGACTAAACATATGGAATTTCATATTAAAGATGAAAAGAGAGACAAGGAAATGAACCGCGGCTCAGATGACGACTCAGATTTTGACGGCGGGCTAGACTGGCCTATGGACAATCACGAATGTTTAACTTGCAAGAAGAGATACAGCACTAAGAAATCTCTCCTGAGACATCAACTGCTGCACGAAGAGCCAAATTTTGAATGCGATATATGTAATGTAAAATTCTATCGGAAAGACAAGCTGAAAGCACACTACGACAAATGTTCGGAAAAGAACCCAGACCAAGTTAGAAAGTGCAATATCTGCGGAGACAGCTTTGAGAACAACGATATGCTGAAGGAACACAGAGCCAAACATGTTACTGAGGGAATTTTGACCGAAGAAGATCTACGAGACATAGAACCACAGGTTGAAGACAGAAAACCtggtgaaaaaataacaagaaaacgAAGAACTGATATCGTAGGACTTGAATGCACGGAGTGTAACAAGAGATACACATCTAGAAAGGGGCTGTTACGTCACATACAAGTTCACGAGGGTAAAAAATACCTCTGTGATATATGCCCAAAGAAATTTTACAGGCGAGAACACCTCAAGATACACGTAGCCAAACACAATATGATTAAACCGTACAAATGCGATCGTTGTACCAAACGTTTTGCCAAAGAAGAGCAGCTTATAAATCACCTTTCTAAACACGACagaaattttaagaaaaacaAGGAAACTGATAGCTCAAAAAGATTCTTGTGCGAAATTTGTTCTAAAAGCTTCACTCAGTCGACTACCCTTATCGCGCATTTGCGAGCTCACAACGGAATAAAACCCTACGTTTGCGAAGTCTGCTCTCGACCCTTCACCACTAATGCTTATCTTAAAATGCATATGAGAACACATACTCAAGAAAGACCTTATATCTGCCAGTACTGTTCTAGGGCCTTTGCAAGAGCCGATACCTTGGCAAATCATCTAACGTCCCACACAGGGGAGGCTAAATATCACTGCAAATATTGTCCCAAGAATTTCAGAAGGCTTAAATCGCTGAAAGAACATGTCTTCATTCATACAGGTCAAAGACCTTACGCTTGTCCAACATGCGACCGAAGGTTTAACAACAATGGTAGTAGATACGCACACAGTAAAAGATGCAAGCAAAATTTATTGCAGAATCAAAACAGGGGACAAAATTCTGGCGCTAATCAGGGAAGAATCCATACCAGTAATCAGATACAAACTATCAAACCACAGAGCGGTAAAATTATAACTATTACTAGACAAGGGGATGGTGTTACTGCACAACAAGTTATGCAGCATCAAGAAATTCTGATGCCTTTAATTCTACCGCTAACTGTTACGTTGGCTGATGTAGGAGAGGAGGTCATTCTTCCTGAGGGTACGAAAATCTTCACAACTTCGTAA
Protein Sequence: MDAEEVNTSEPPQNDENISAVVEICRVCLLEGIEMRDLFMENDVVSLSTKAMSFTNAKMIPGDGLPGQVCVSCAAELDSTYEFKLQVEHADRILRKRYVSLNIKEELFFNEVEVDLETNQTIEQNPEQLSDGHIQLSTESDQEDQADTEIESSLLKDNLALLQVEKLAEAEQEGLEMVETLPGSMEQIRIDPGSIVAQEHGYVAQQKSIKEEELPAAGASNSQETKNYEEERENIKEERSEQKMVIESVESLASEQSIQIETRKSKRKSARRVPILDHDSDEDNYFENLNLSSRLKQSQSDKAEKVYYMCYICDKHFLAKGVLKEHMHSHEEVRKVMSLVKVPEKTVKVTPSPTKHSPSGKQANKCPYCGKEYLYIISYNKHLKQHENDKEESKVEPMPLEVSFHEDDNTLDFDNYDNSYDSDPDFNEDSEEHTCEKCEGVFNTKKALDKHMVKHEILKCSICNEESEGLEAFKNHRSGHVTEGVLTEEDLKEDIKQVVHLQESTQAEEAVQARRKTRNSDVKGLRCPKCPMVYSHKKSLSRHLETHTGTTYGCKSCSQQFTRKDHLRRHMEQHARMKSFKCTQCNKTFGNELTLRNHLIATNHKTIIRGEEYDPNKRLKRVAAKEAQKIIDKIKTEDNADDNDSSDGGETLQKKTYEKKEYECATCNRKCASKQSLTKHMEFHIKDEKRDKEMNRGSDDDSDFDGGLDWPMDNHECLTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNDMLKEHRAKHVTEGILTEEDLRDIEPQVEDRKPGEKITRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCDRCTKRFAKEEQLINHLSKHDRNFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQNQNRGQNSGANQGRIHTSNQIQTIKPQSGKIITITRQGDGVTAQQVMQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00719614;
90% Identity: iTF_01413603; iTF_01411737; iTF_01412538; iTF_01303641; iTF_00938931; iTF_00939792;
80% Identity: -