Eruf012896.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- bab1
- Assembly
- GCA_963920795.1
- Location
- OY987205.1:45514858-45518194[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-12 1.5e-09 38.6 0.0 4 45 365 406 362 406 0.92 2 2 0.19 1.1e+02 3.7 1.1 4 20 498 513 497 513 0.93
Sequence Information
- Coding Sequence
- ATGGGCAGCAGCGAAGGACAAACGTACTGCTTGCGATGGAACAACCACAAGTCGAATTTGGTCGAGATTTTGGACGCTCTGATCAAAATGGAAAGTTACGTAGATTGCACCATCGTAGTGGACGACCAGGTGCAGTTCAAGGCCCACAGGGTGGTCCTGGCGGCGAACTCGCCCTACTTTCAATCGATCCTTCAAGACGTCCCCATGGACCACTGCAGCATCCTGTTCCCCGGAGTGCAGGCATTCGAGATGCGCGCCTTGTTGGAGTACATGTACACGGGCGAGGTGAACGTGACTCAAAGTCAAATCcccaaaataatgaaaatcgCCGAGCAGCTGGAAGTCAAGGGACTGTTCGACATGACTGATCTTAAAgagaaattcaacaaattcgAAGAACCACCGACGCACTACCCGCCTCCAACCACTCCGACAGCGCCCTCTTTCGCAGCCAGCAAAGACGGGGAGCAGCAGCAGTCTTCGCCGGTGATCACGACGTCGACGAACGTGACCTCGGCGCAAAGCAGTAGCGCCTCCCCGCCTTACTCCTACAAGTCCCCGTACACCAGTCTTTACTCGAAGAGTCCTGGGCCCTCGACGTCGGAACGCCACTCGCAGTGGCCCCCCATTTCGCCCCATTTGCCCACGACGCTGCCCAGCGCGGCCGCCGCTGCCATGCTGAGCTCCGTCTACGAAAGCGCCAGTGACATGAACCCGCTCAAGAGGAAGAAGCTCTCCTCCATCTCGAGCATGCTGCAGTACCCGACTCCGAAGGACACGCCGATTTTAAGGAATGTGCTGGCACAGTCTCACGCGGCCGACTCATCCCAACCGATGCCTCTGATTTGCCAACCCGTCAAACCGGAAAGGGCCGAGAAACCTGGCGTTAACAACGGCTGCAATGGATCGGAGTATTCTTCGGACAAGaaatcaaaatatgaagAGCCTCACTCTCCCTACACCGATAAATCATTTGAGGACGATGGCCTGGACTGCCCCCCTGCGTATCTGGGAGACTCCCGTCTGCCCCAATATTCGTCGCAGCAGCAGCAAAAGCCGGAGTGGAAGCGGTACAAGCAATACACCAGGAGCGATATTTTGTCCGCTATCGAATGCGTGAGGAACGGAATGAGCGCCCTACAGGCGTCCAGAAAATACGGGGTTCCATCCCGAACCCTCTACGACAAGGTAAAAAAGTTGGGTATAACAACAGGCAGGCCTATGAACAGGACCATAAAGAGGAGCCCGAGTAGCGGGGGGGGCTCCGCTGGGTTCCAGTTCGGGATGTCCGGCAGTGGTCATCCCTACGGTCCAGGGGAGACGATGATCTCGCAGATGCACGAGCCCATGGACAGGGAGAAGGACCGGGAGCACCACATCCCCCCAACGATACCCCATCCAGCGGCTGCCCTTCTCGATCCAAACTTCCTCCAGCAAGCTTTCGAAGCTCGAGGTGGTGATATTGCTGGTAGGGAAGCTCTACACGCGATGGCGCTGGCCGCAGCTGCCCACGCTGCTGTGAACGGTATGTCGACAAGTCCTGGTACTAACGGAACTGCGCGATCGCCAAGCCCTGGTCTTGGCAAATACCAAAAACCGCAAAGCCCACATCCGAGCCTAGATAGAGAGAGAGATCGTGAACGTGAAAGAGAAAGAGAACAAGAGCGAGAACGAGAGCGGGATCGAGAACGGCAACGTGAGAGAGAAAGGGACAGAGACAGTGACAGGGAACGAGAACGAGACCACCATATGGAGGAGGACGAAGACAAGGTCGAGGACTTATCGATGTCGCGGAAGGATGTCAGTCCTTCGCCCTTGCCGTCACACCATTCCTACCTGCAGAGGGCGCCACATCCGCTTCCTCAGCACACTCCACCCCCGCAGCACCAGCAAACAGGGGGCGTTATTGTGCCGCCGATGACAAAAATCCCAACGAACACAGTCGAGGACTTCTCACCTGTCGAATGTAAGCGGGAGCTAATTACGGACGACTCGAGGGACtag
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFEEPPTHYPPPTTPTAPSFAASKDGEQQQSSPVITTSTNVTSAQSSSASPPYSYKSPYTSLYSKSPGPSTSERHSQWPPISPHLPTTLPSAAAAAMLSSVYESASDMNPLKRKKLSSISSMLQYPTPKDTPILRNVLAQSHAADSSQPMPLICQPVKPERAEKPGVNNGCNGSEYSSDKKSKYEEPHSPYTDKSFEDDGLDCPPAYLGDSRLPQYSSQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSSGGGSAGFQFGMSGSGHPYGPGETMISQMHEPMDREKDREHHIPPTIPHPAAALLDPNFLQQAFEARGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPGLGKYQKPQSPHPSLDRERDREREREREQERERERDRERQRERERDRDSDRERERDHHMEEDEDKVEDLSMSRKDVSPSPLPSHHSYLQRAPHPLPQHTPPPQHQQTGGVIVPPMTKIPTNTVEDFSPVECKRELITDDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717907; iTF_01049571; iTF_01256334; iTF_01256497; iTF_01049779; iTF_01461065; iTF_00628164; iTF_00628472; iTF_01461275; iTF_00937199; iTF_00937410; iTF_00936469; iTF_00936677; iTF_00454458; iTF_00455041; iTF_00453149; iTF_00453679; iTF_01183743; iTF_01183933;
- 90% Identity
- iTF_01049779;
- 80% Identity
- iTF_00717907;