Ncya023353.1
Basic Information
- Insect
- Neoitamus cyanurus
- Gene Symbol
- bab1
- Assembly
- GCA_947538895.1
- Location
- OX384541.1:16165715-16169262[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-26 3.4e-23 82.8 0.3 3 101 26 121 24 128 0.92 2 2 4.5 2.1e+03 -0.3 0.0 62 97 220 255 208 259 0.83
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACGTACTGCTTGCGATGGAACAATCACAAGTCAAACTTGGTGGAAATTTTGGATGCTCTGATCAAAATGGAGAGTTACGTGGATTGTACCATCGTAGTGGACGACCAGGTGCAATTCAAGGCTCACAGAGTAGTGCTTGCGGCGAACTCGCCATACTTTCAATCCATTCTTCAAGATGTTCCCATGGATCACTGCAGCATCCTGTTCCCTGGAGTGCAGGCATTCGAGATGCGCGCCTTATTGGAGTACATGTACACAGGAGAAGTGAACGTGACTCAAAGTCAAATCCCTAAAATTATGAAAATCGCCGAGCAGCTGGAAGTCAAAGGACTGTTCGACATGACTGATCTAAAAGAGAAATTTAATAAATTTGAGGAACCACCGACACACTACCCTCCTCCATCGACTCCGACAGCGCCCCCATTTACAGCTAATAAGGAAGGTGAGCAGCAATCATCGCCGGTGATCACAACATCAACAAATGTTACATCGGCACAGAGTAGTAGTACCTCACCGCCGTATGCCTACAAGTCGCCGTATTCCAGTCTTTACTCAAAAAGTCCCGGACCTTCGACTTCGGAGCGACACTCGCAGTGGCCTCCTATTTCACCGCATTTGCCTACGACGCTTCCAAGTGCCGCAGCGGCTGCCATGCTGAGTTCTGTATACGAAAGTGCTAGTGATATGAATCCGCTGAAGAGGAAGAAGCTCTCGTCCATCACCAGTATGCTGCAGTACCCGACTCCGAAAGATACGCCGATATTAAGGAATGTGCTGGCACAATCTCATGCGGCTGACTCATCTCAACCAATGCCTTTAATTTGCCAACCTGTAAAGCCGGATAGAAGCGAGAAACCTGGCGTTAATAATGGCTGCAATGGATCTGAATATGCTTCGGATAAGAAATCGAAGTATGACGAACCCCACTCTCCTTACACCGATAAATCATTTGAAGATGATGGTCTGGATTGCCCACCTGCGTATTTGGGAGATTCCCGATTGCCCCAATATTCCTCTCAGCAGCAACAAAAGCCGGAATGGAAGCGATATAAGCAATATACCAGAAGCGATATTTTATCCGCAATTGAATGTGTGAGAAACGGTATGAGCGCTCTCCAAGCATCCAGAAAGTACGGTGTGCCATCACGAACCCTCTACGATAAGGTAAAGAAGTTGGGCATAACGACAGGCAGGCCTATGAACAGGACAATAAAAAGAAGCCCAAGCAGTGGCGGGGGCTCCTCCGGTTTCCAGTTCAGTATGTCTAGCAGTGGGCATCCCTATGGTTCAGGCGAAACAATGATCTCACAAATGCACGAACCGATGGATAGAGATAAAGACAGGGAACATCATATTCCTCCAACGATACCCCACCCAGCTGCTGCACTTCTCGATCCCAATTTCCTGCAGCAGGCTTTTGAAGCTCGTGGCGGTGATATTGCTGGTAGGGAAGCTCTGCATGCGATGGCGCTCGCAGCTGCTGCCCATGCTGCTGTTAATGGTATGTCCACAAGTCCTGGGACCAATGGAACGGCAAGATCGCCAAGTCCTGGTCTTGGGAAGTATCAAAAATCACAGAGCCCGCACATGAGTCACGATAGAGAGAGAGATCGTGAGCGTGAGAGAGGGCAAGAACGAGAGCGAGATCGTGAACGACAACGTGAGAGAGATATAGACAGTGATAGGGAGCATGAACGAGATCATATGGAGGAAGACGAGGACAAGGTCGAAGACTTATCAATGTCGCGAAAGGATGTTAGTCCTTCGCCCTTATCATCGCATCATTCCTACCTTCAGAGGCCACCACAACCACTCCCTCAACACACACCACCGCCCCAACACCAGCAAACAGGCGGCGTTATTGTGCCGCCAATGACAAAAATCCCCACGACTACCGTCGAAGACTTTTCAGGTGTTGATTGTAAACGGGAGTTAATTACAGACGACTCAAGAGACTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFEEPPTHYPPPSTPTAPPFTANKEGEQQSSPVITTSTNVTSAQSSSTSPPYAYKSPYSSLYSKSPGPSTSERHSQWPPISPHLPTTLPSAAAAAMLSSVYESASDMNPLKRKKLSSITSMLQYPTPKDTPILRNVLAQSHAADSSQPMPLICQPVKPDRSEKPGVNNGCNGSEYASDKKSKYDEPHSPYTDKSFEDDGLDCPPAYLGDSRLPQYSSQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTIKRSPSSGGGSSGFQFSMSSSGHPYGSGETMISQMHEPMDRDKDREHHIPPTIPHPAAALLDPNFLQQAFEARGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPGLGKYQKSQSPHMSHDRERDRERERGQERERDRERQRERDIDSDREHERDHMEEDEDKVEDLSMSRKDVSPSPLSSHHSYLQRPPQPLPQHTPPPQHQQTGGVIVPPMTKIPTTTVEDFSGVDCKRELITDDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717661;
- 90% Identity
- iTF_01049571; iTF_00937199; iTF_00937410; iTF_00936469; iTF_00936677; iTF_00628472; iTF_00628164; iTF_01461275; iTF_01461065; iTF_00717661; iTF_00717907; iTF_01183743; iTF_01183933;
- 80% Identity
- iTF_01049571;