Dlin004903.1
Basic Information
- Insect
- Dioctria linearis
- Gene Symbol
- bab1_2
- Assembly
- GCA_963930735.1
- Location
- OZ005740.1:44077298-44079501[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-11 4.6e-09 38.5 0.0 4 45 384 425 381 425 0.92 2 2 1.1 3.5e+02 3.6 1.1 4 20 519 534 518 534 0.93
Sequence Information
- Coding Sequence
- ATGAGTAGCAGTGAAGGACAGACGTACTGTTTACGATGGAACAATCACAAGTCCAATTTGGTGGAGATTTTGGACGCTCTCATAAAAATGGAGAGTTATGTCGACTGCACAATTGTTGTTGATGATCAAGTGCAATTTAAGGCGCATAGAGTGGTGCTTGCAGCGAACTCACCATACTTTCAATCAATACTCCAGGATGTACCTATGGATCATTGTAGCATATTATTTCCTGGAGTTCAAGCATTTGAAATGCGTGCACTATTAGAGTATATGTATACGGGAGAAGTTAATGTCACACAAAGTCAAAtaccaaaaattatgaaaattgcagAGCAGCTAGAAGTTAAAGGATTATTTGACATGACTGATTTGAAGGagaaattcaataaatttgatGAACCCTCAACGCATTATCCTCCTCCTGTAACTCCAACAACACCGTTATTTACTAGTAAAGAGAGTGaacaacagcaacagcatcagcagcagcaactacaacaacaacaacaacaacagcatcagcagcagcaacaacagtcTTCACCGATAATCACAACATCAACAAATGTCACATCGGCACAGAGTAGTAGCTCTTCACCGCCCTATTCTTATAAATCACCTTATTCGAGTTTGTATTCTAAAAGTCCAGGTCCATCCACCTCTGAACGTCACTCGCAATGGCCTTCTATATCTCCTCATTTACCAACAACTCTACCAAGTGCTGCGGCTGCTGCAATGTTGAGTTCCGTGTACGAAAGTGCAGGTGATATGAATCCATTGAAAAGGAAGAAACTTTCTTCACTTTCGAGTATGCTTCAATATCCCAGCGCTAAAGATACTCCGATTTTAAGAAATGTCCTAGCACAATCTCATGCTGTCGACTCATCTCAGGCTATGCCGTTAATATGTCAACCAGTAAAGGCAGAAAGGAGCGAAAAACAAGGCTCAAATAATTGTAACGGATCTGAATTTTCTTCGGATAAGAAATCTAAATATGATGAACCGCACTCTCCATATACGGACAAATCATTTGAAGATGACGGCTTAGATTGCCCTCCAACATATTTAGGAGATTCACGATTACCTCAGTATTCCCAACAGCATCAACAAAAACCTGAATGGAAACGATATAAACAGTATACCAGAAGCGATATTTTATCAGCGATTGAATGCGTTCGAAATGGTATGAGTGCTTTGCAAGCTTCACGAAAATATGGTGTACCTTCAAGAACTCTTTAcgataaagttaaaaaattggGCATTACCACAGGACGCCCAATGAATCGGACAATGAAAAGAAGTCCAAACAGTGGTGGTGGAAGTTGTTCAGGTTTTCAATTCAGCACTAGTGGAGGAGGTAATCATCCGTATGGACCAGGTGAAACAATGATCTCACAAATGCATGAACCTATGGAACGAGAAAAGGATCGAGAACATCACATTCCACCGACAATACCACATCCTGCTGCTGCACTTTTAGATCCAAATTTCCTGCAGCAAGCTTTTGAGGCTAGAGGTGGAGATATCGCAGGTAGAGAAGCTTTACATGCTATGGCACTTGCTGCTGCAGCACATGCAGCTGTAAATGGAATGTCAACAAGTCCCGGTACGAATGGTACAGCAAGATCACCGAGTCCAGGATTTATGAAATATCAAAAATCTCAAAGTCCACATTTTAGTCATGATAAGGAACGGGAACGAGAACGAGATAGAGAACGAGAACGAGAACGAGACAGAGAACGAGAACGGGAACGAGAACGAGAACGACAACAAGAACGGGAACGAGATCGGGAAGAAGAACGGGAACGAGAAAGAGCCcatatagaagaagaagaagaagaagatgaagaagaagacaaaGTTGAAGATTTATCAATGGCAAGAAAAGATATTACATCATCACCGTTACCATCACATCATTCCTATCATCATCAACAGCAACATCAAACGTCACCACCAACATTACAGCATCAGTTATCATCACAACAGCATCAGCCACCGCTGCCGCATCAACAAACCGGTGTAATTGTACCACCAATGACGAAACTCCCAACGAAAAGTAATGACGGCTATAAAACTATAGAAACCAAACTTGAAGAATGTGTCATAGAAGATTCTAGAAATTAG
- Protein Sequence
- MSSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFDEPSTHYPPPVTPTTPLFTSKESEQQQQHQQQQLQQQQQQQHQQQQQQSSPIITTSTNVTSAQSSSSSPPYSYKSPYSSLYSKSPGPSTSERHSQWPSISPHLPTTLPSAAAAAMLSSVYESAGDMNPLKRKKLSSLSSMLQYPSAKDTPILRNVLAQSHAVDSSQAMPLICQPVKAERSEKQGSNNCNGSEFSSDKKSKYDEPHSPYTDKSFEDDGLDCPPTYLGDSRLPQYSQQHQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTMKRSPNSGGGSCSGFQFSTSGGGNHPYGPGETMISQMHEPMEREKDREHHIPPTIPHPAAALLDPNFLQQAFEARGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPGFMKYQKSQSPHFSHDKERERERDRERERERDRERERERERERQQERERDREEERERERAHIEEEEEEDEEEDKVEDLSMARKDITSSPLPSHHSYHHQQQHQTSPPTLQHQLSSQQHQPPLPHQQTGVIVPPMTKLPTKSNDGYKTIETKLEECVIEDSRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717661;
- 90% Identity
- iTF_00453679; iTF_00454458; iTF_00455041;
- 80% Identity
- iTF_00453679;