Basic Information

Insect: Dioctria rufipes
Gene Symbol: bab1
Assembly: GCA_963924295.1
Location: OZ002740.1:40785049-40787256[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.5e-11 4.6e-09 38.4 0.0 4 45 379 420 376 420 0.92

2 2 1.1 3.4e+02 3.6 1.1 4 20 514 529 513 529 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.5e-11	4.6e-09	38.4	0.0	4	45	379	420	376	420	0.92
2	2	1.1	3.4e+02	3.6	1.1	4	20	514	529	513	529	0.93

Sequence Information

Coding Sequence: ATGAGTAGCAGTGAAGGACAGACGTACTGTTTACGATGGAACAATCACAAGTCCAATTTGGTGGAGATTTTGGACGCTCTCATAAAAATGGAGAGTTATGTCGATTGCACAATTGTTGTTGATGATCAAGTGCAATTTAAGGCGCATAGAGTGGTGCTTGCAGCGAACTCACCATATTTTCAATCAATACTCCAGGATGTACCTATGGATCATTGTAGCATATTATTTCCTGGAGTTCAAGCATTTGAAATGCGTGCACTATTAGAGTATATGTATACGGGAGAAGTAAATGTCACACAAAGTCAAAtaccaaaaattatgaaaattgcaGAGCAACTAGAAGTTAAAGGTTTATTTGACATGACTGATTtgaaagagaaattcaataaatttgatGAACCCTCAACGCATTATCCTTCTCCTGTGACTCCAACAACACCGTTATTTACAAGTAAAGAGAATGAActacaacagcagcagcagcaacaacaacttcaacaacaacaacaacagcagcaacaatcTTCACCGATAATCACAACATCAACAAATGTCACAACCGCACAGAGTAGTAGCTCTTCACCGCCCTATTCTTATAAATCACCTTATTCGAGTTTGTATTCTAAAAGTCCAGGTCCATCCACATCTGAACGTCACTCGCAATGGCCTTCTATATCTCCTCATTTACCAACAACTCTACCAAGTGCTGCGGCAGCTGCAATGTTGAGTTCCGTATACGAAAGTGCAGGTGATATGAATCCATTAAAAAGGAAGAAACTTTCTTCACTTTCGAGTATGCTTCAATATCCCAGCGCTAAAGATACTCCGATTTTAAGAAATGTCCTGGCACAATCTCATGCTGTGGACTCATCTCAGGCTTTGCCATTAATTTGTCAACCAGTTAAAACAGAAAGGATCGAAAAACAAGGCTCAAATAATTGTAACGGATCTGAATTTTCCTCGGATAAGaaatCTAAATATGATGAACCGCACTCTCCATATACAGACAAATCATTTGAAGATGACGGCTTAGATTGCCCTCCAACGTATTTAGGAGATTCACGATTACCTCAGTATTCCCAACAGCATCAACAAAAACCTGAATGGAAACGATATAAACAGTATACCAGAAGCGATATTTTATCAGCGATTGAATGTGTTCGAAATGGTATGAGTGCTTTGCAAGCTTCACGAAAATATGGTGTACCATCAAGAACTCTTTACGACAAAGTTAAAAAATTAGGCATTACCACAGGACGCCCTATGAATCGAACAATGAAAAGAAGTCCAAACAGTGGTGGTGGAAGTTGTTCAGGTTTTCAATTCGGAACTAGTGGAGGAGGTAATCATCCGTATGGACCAGGTGAAACAATGATCTCACAAATGCATGAACCTATGGAACGAGAAAAAGATCGAGAACATCATATTCCACCGACAATACCACATCCTGCTGCTGCACTTTTAGATCCAAATTTTCTACAGCAGGCTTTCGAGGCACGAGGTGGAGATATAGCGGGTAGAGAAGCTTTACATGCTATGGCACTTGCTGCTGCAGCACATGCAGCTGTAAATGGAATGTCAACAAGTCCCGGTACGAATGGTACAGCAAGATCACCGAGTCCAGGATTTATGAAATATCAAAAGGCCCAAAGTCCACATTTTAGTCATGATAAGGAACGTGAACGAGAACGAGATAGAGAACGAGAACGAGACAGAGAACGAGAACGAGAACGGGAACGAGAACGAGAGCGAGAACGAGAACAAGAACGGGAACGAAATCGGGAAGAAGAACTGGATAGAGAAAGAGAGcatatagaagaagaagaagaagaagatgaagaagaagacaaaGTTGAAGATTTATCAATGACAAGAAAAGATATTACATCATCACCGTTACCATCTCATCATTcctatcatcatcatcaacagcaACATCAAACGTCACCACCAACATTACAGCATCAGTTATCATCACAACAGCATCAGCCGCCGCCTCCGCCGCCGCCGCTGCCGCATCATCAGACCGGTGTAATAGTACCACCGATGACGAAACTCCCAACGAAAAGTAATGACGACTATAAATCTATAGAAACTAAACTTGGAGAATGTGTCATAGAAGATTCTAGAAGAGATTAG
Protein Sequence: MSSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFDEPSTHYPSPVTPTTPLFTSKENELQQQQQQQQLQQQQQQQQQSSPIITTSTNVTTAQSSSSSPPYSYKSPYSSLYSKSPGPSTSERHSQWPSISPHLPTTLPSAAAAAMLSSVYESAGDMNPLKRKKLSSLSSMLQYPSAKDTPILRNVLAQSHAVDSSQALPLICQPVKTERIEKQGSNNCNGSEFSSDKKSKYDEPHSPYTDKSFEDDGLDCPPTYLGDSRLPQYSQQHQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTMKRSPNSGGGSCSGFQFGTSGGGNHPYGPGETMISQMHEPMEREKDREHHIPPTIPHPAAALLDPNFLQQAFEARGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPGFMKYQKAQSPHFSHDKERERERDRERERDREREREREREREREREQERERNREEELDREREHIEEEEEEDEEEDKVEDLSMTRKDITSSPLPSHHSYHHHQQQHQTSPPTLQHQLSSQQHQPPPPPPPLPHHQTGVIVPPMTKLPTKSNDDYKSIETKLGECVIEDSRRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00717661;
90% Identity: iTF_00453149;
80% Identity: iTF_00455041;