Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007550.1:3504088-3507480[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0074 0.53 11.4 0.3 1 23 113 136 113 136 0.90

2 18 0.0073 0.52 11.5 0.4 2 23 167 189 166 189 0.92

3 18 0.0007 0.05 14.7 1.4 1 23 211 233 211 233 0.99

4 18 0.092 6.6 8.0 0.7 1 23 237 259 237 259 0.90

5 18 0.00054 0.038 15.0 0.3 1 23 264 287 264 287 0.89

6 18 0.0011 0.08 14.0 2.1 1 23 293 316 293 316 0.94

7 18 0.00098 0.07 14.2 3.2 1 23 323 346 323 346 0.97

8 18 5.8e-05 0.0041 18.1 0.2 3 23 354 374 353 374 0.99

9 18 2.2e-07 1.5e-05 25.7 1.9 1 23 380 402 380 402 0.99

10 18 3.4e-05 0.0024 18.8 5.5 1 23 408 430 408 431 0.96

11 18 0.063 4.5 8.5 0.1 1 23 557 579 557 579 0.97

12 18 1.2 88 4.5 0.1 1 23 651 673 651 673 0.90

13 18 0.00069 0.049 14.7 0.2 1 23 677 699 677 699 0.98

14 18 0.007 0.5 11.5 1.3 1 23 704 727 704 727 0.95

15 18 0.0039 0.28 12.3 0.3 2 23 734 756 734 756 0.93

16 18 0.00053 0.038 15.0 4.7 1 23 763 786 763 786 0.98

17 18 3.4e-05 0.0024 18.8 0.7 2 23 793 814 792 814 0.96

18 18 3.5e-05 0.0025 18.7 0.6 1 23 820 842 820 842 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0074	0.53	11.4	0.3	1	23	113	136	113	136	0.90
2	18	0.0073	0.52	11.5	0.4	2	23	167	189	166	189	0.92
3	18	0.0007	0.05	14.7	1.4	1	23	211	233	211	233	0.99
4	18	0.092	6.6	8.0	0.7	1	23	237	259	237	259	0.90
5	18	0.00054	0.038	15.0	0.3	1	23	264	287	264	287	0.89
6	18	0.0011	0.08	14.0	2.1	1	23	293	316	293	316	0.94
7	18	0.00098	0.07	14.2	3.2	1	23	323	346	323	346	0.97
8	18	5.8e-05	0.0041	18.1	0.2	3	23	354	374	353	374	0.99
9	18	2.2e-07	1.5e-05	25.7	1.9	1	23	380	402	380	402	0.99
10	18	3.4e-05	0.0024	18.8	5.5	1	23	408	430	408	431	0.96
11	18	0.063	4.5	8.5	0.1	1	23	557	579	557	579	0.97
12	18	1.2	88	4.5	0.1	1	23	651	673	651	673	0.90
13	18	0.00069	0.049	14.7	0.2	1	23	677	699	677	699	0.98
14	18	0.007	0.5	11.5	1.3	1	23	704	727	704	727	0.95
15	18	0.0039	0.28	12.3	0.3	2	23	734	756	734	756	0.93
16	18	0.00053	0.038	15.0	4.7	1	23	763	786	763	786	0.98
17	18	3.4e-05	0.0024	18.8	0.7	2	23	793	814	792	814	0.96
18	18	3.5e-05	0.0025	18.7	0.6	1	23	820	842	820	842	0.99

Sequence Information

Coding Sequence: ATGCATTACACATTCATATTACTGTACTACCTAGATCTAGATCTAGAGCAGATAAACCAAGGCAAGTTAAGAGCTATCAAATCCTATTACCAACTAGTTCATAAATTAGGTCAATTAAAGCAGAAAGATTCTCATCCcgcttattttcttattttaggtATTGATCAGCACTCTCCACAAGAAACTGAAGAAAACCAACTCACTCAAAACAATACAGAAACGCAAACACTGACTGTAGTTAATAAAGCAGACCCTGAAGAGCAAGCCAGGAAGGATAGCGTCTTGACGCTTCTAGAATGTTCCAGAATATGCCCTTTCAAATGGGCGAAAAACTTATACTTCTGTATTTACTGCGAAGAATCATTCGCTGATCCCGCTAAACTGCGTAAGCACACATTCGTTGAACACGGCAATATTCAACCAGAAGAGATTAAACAGAGATTAATATTAATCGGAAGAAAAAGGCACGAGTTTCTTAAAACAGACATCACAGATCTTAGCTGCAAACTTTGCGACACACCTATAAGCTCACTAGACCATCTCAAAGCACATCTCATcgaaaaacataaaaagaaaatcaaCCTAAAATCCCACCTTGGGATACTCCCTTTCAGAATCAATGTAGATGATTACAAATGCGTAATTTGCGATGAAAAATACGGAGAGTACAAGACTTTAAACCATCACATGAACGTTCATTTTCAGAACTTCATTTGTGAACAATGCGGTTCTGGATTCATAACTCCCGCACGGTTACGGGTCCACTGCTTCACCCACGAAACCGGTTCCTTCCCCTGCAGTGATTGTAATAAAGTCTTTCGCTCCAGCAACGCTAATAAAGAACACTACGCCGATGTACACTTGAAGGTGAAAAGACACAGATGCCCTCAATGCCCTGAGACATTCAGAAACTACTTTCAGAGAACTAAACACATATCTCTTGCTCACGGGGTTAAATTAAAAGAATTTAAGTGTGAATACTGTCCTAAAGTCTTTCACTACAGCGGGAAAATGACTGGCCACATTCGACATGCGCACCTAAAAGAAAAACGCCATGGTTGTGACTTATGCGACTGGAAATTTTACTCTGCATATGAATTGAAACAGCATATGATAAAACACGGCGGAGAGAGAAAGTATCAGTGCAATGTCTGCAAGAAATCGTACGCGAGGAAGTATACCCTTCGAGAGCATATGAGGATACATGAGAATGATAGACGATTTGTTTGCACGGTTTGCGGCAAGTCGTTTGTGCAGGCGTGTAGTTTGAAACACCACTCTAGGATCCACCATCCGTCGGTCCCGAAAGGAAACCAAATAGCTGCGACGAAGCAAACGAGAGTTGTGCCACTATTCCAAGTGGCCTACGATCGCAGCCTCTGCAAACCTCTCGGAACAATCTCAGACTTCAGTAAACTGCAAAGAACACAGAATATCTCGTTCTCAGACAATATCGTGTACGAAAATTCTCGAAGTCCATCGCCAGTATGCCCCAGAACCCCATCACCGTACGATCGCAGCCTACACGACGAACAAACAGATATCAATCCACCAGCTAAATATTTACTCAAAGAACAACCTGCGAGAAAGGTCTCTGATTGCAGACAGAACGCTCTTATAGTTTTCGAATACTCCACCGCTTACCCTTTCATATTCTCAAACAACAGTTATAGGTGCTTTGTCTGCTCCCAATCGTATTTAGACGTACCAAACCTTAAGGTCCACATGGCGGAACACCCTTTCGCTCATATCAAACGACTAATGAACAACAGAAAGGAGAATGTCCTTAAAGTTGACGTTAGCGAACTGACTTGCAAACTCTGCATGCTGCCTATGAGAGATTTGGTTTTATTGAAGCACCATCTCAAAAACGAGCACAATAAACCGGTAGATACGGAGCTGCAAGACAATCTGGTGCCTTACGATCTCACAATACACGGTCCCGAGGGGTACCAGTGCGTTGTTTGCGAGCAGAACTTCATCAAAGTCCGTATTCTCGTTATCCACATGAGCGATCATTTCAGCAACTATAGCTGCGAAGTCTGCGGATCAGGTTTCATGACATTACGTCTGCTAAAGAAACATCTAGAAGTCCACGAGACGGGAAACTTTCCCTGCGATCGTTGCAGCAAAGTATTCAGCACTACGCACAAAAGGGCTTTGCATATCCGCGGGGTTCATATGAAACTGTGTCCGCGGAGATGCCCTATTTGTCCGGAGCGGTTCAACTCTAACTACAAACGGACAATACACCTTCAAGATGTGCATAATCAATCCACTAGAGTTTATAAGTGTAAGACGTGCGGTCGCGGTTTCCACCTCAAGTATCATTTGTTAAGTCACGTGCGATCCGTGCATTTGCAAGAGCGGAATCAACAGTGCGATGTGTGTCTGCAACGGTTTTCTAATAAAGAGTCATTGAAGCGACATATGGTTGTGCATACTGGAGAGAAGAATTACAAATGTGAAGTCTGTGGAATGGCGTTCTTGAGACGCAAGAATTTGAAGGACCATTTACGGTTGCATGAAATTCATTGA
Protein Sequence: MHYTFILLYYLDLDLEQINQGKLRAIKSYYQLVHKLGQLKQKDSHPAYFLILGIDQHSPQETEENQLTQNNTETQTLTVVNKADPEEQARKDSVLTLLECSRICPFKWAKNLYFCIYCEESFADPAKLRKHTFVEHGNIQPEEIKQRLILIGRKRHEFLKTDITDLSCKLCDTPISSLDHLKAHLIEKHKKKINLKSHLGILPFRINVDDYKCVICDEKYGEYKTLNHHMNVHFQNFICEQCGSGFITPARLRVHCFTHETGSFPCSDCNKVFRSSNANKEHYADVHLKVKRHRCPQCPETFRNYFQRTKHISLAHGVKLKEFKCEYCPKVFHYSGKMTGHIRHAHLKEKRHGCDLCDWKFYSAYELKQHMIKHGGERKYQCNVCKKSYARKYTLREHMRIHENDRRFVCTVCGKSFVQACSLKHHSRIHHPSVPKGNQIAATKQTRVVPLFQVAYDRSLCKPLGTISDFSKLQRTQNISFSDNIVYENSRSPSPVCPRTPSPYDRSLHDEQTDINPPAKYLLKEQPARKVSDCRQNALIVFEYSTAYPFIFSNNSYRCFVCSQSYLDVPNLKVHMAEHPFAHIKRLMNNRKENVLKVDVSELTCKLCMLPMRDLVLLKHHLKNEHNKPVDTELQDNLVPYDLTIHGPEGYQCVVCEQNFIKVRILVIHMSDHFSNYSCEVCGSGFMTLRLLKKHLEVHETGNFPCDRCSKVFSTTHKRALHIRGVHMKLCPRRCPICPERFNSNYKRTIHLQDVHNQSTRVYKCKTCGRGFHLKYHLLSHVRSVHLQERNQQCDVCLQRFSNKESLKRHMVVHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700325; iTF_00703246; iTF_01161583; iTF_00706260; iTF_00697594; iTF_00705306;
90% Identity: iTF_00703246;
80% Identity: -