Eins023871.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402021.1:6174735-6177929[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0041 0.27 12.2 0.3 1 20 9 29 9 32 0.84 2 20 0.005 0.33 11.9 0.1 1 23 97 120 97 120 0.88 3 20 0.064 4.2 8.4 0.2 2 23 151 173 150 173 0.92 4 20 0.00064 0.042 14.7 1.4 1 23 195 217 195 217 0.99 5 20 0.084 5.5 8.1 0.7 1 23 221 243 221 243 0.90 6 20 0.00049 0.032 15.1 0.3 1 23 248 271 248 271 0.89 7 20 0.0005 0.033 15.1 1.9 1 23 277 300 277 300 0.96 8 20 0.0026 0.17 12.8 3.3 1 23 307 330 307 330 0.97 9 20 0.00013 0.0083 16.9 0.2 3 23 338 358 337 358 0.98 10 20 1.7e-07 1.1e-05 26.0 1.2 1 23 364 386 364 386 0.99 11 20 0.054 3.5 8.7 1.6 1 12 392 403 392 406 0.90 12 20 0.2 13 6.9 0.3 1 23 523 545 523 545 0.97 13 20 10 6.5e+02 1.5 0.7 2 23 570 592 569 592 0.91 14 20 0.27 18 6.5 0.1 1 23 617 639 617 639 0.91 15 20 0.00063 0.042 14.7 0.2 1 23 643 665 643 665 0.98 16 20 0.018 1.2 10.1 1.3 1 23 670 693 670 693 0.95 17 20 0.0072 0.47 11.4 0.4 2 23 700 722 700 722 0.93 18 20 0.002 0.13 13.2 6.1 1 23 729 752 729 752 0.97 19 20 3.1e-05 0.002 18.9 0.7 2 23 759 780 758 780 0.96 20 20 3.2e-05 0.0021 18.8 0.6 1 23 786 808 786 808 0.99
Sequence Information
- Coding Sequence
- ATGCAGATGCTTGCATCTTATATGTTTGTCTGCGAGATAtgtggtgcaaagttcttctccaggagcgaacttgtgaaacaacacatgccaaaacatactgtagggagaagttttgaatGTGTTGATCCACACGAGACTAAAGAAGACACTCTCACTCAAAACAATACAGGAACTCAAACACTGACTGTAGTCAATAAAACAGACCCCGAGGAGCAAGACAGGAAGGATAGCGTTTTGACGCTTCTAGAATGTTCCAGAATATGCCCTTTCAAATGGGCGAAAAATTTATACTTCTGTATTTACTGCGAGGAATCATTCGCTGACCCCGCAAAGCTGCGTAAGCACATATTCGCTGAACACGACAATATTCAACCAGAGGAGATCAAACAGAGATTGATATTGATTGGAAGAAAAAGGCACGAGTTTCTTAAAACAGATATCACAGATCTTAGCTGTAAACTTTGCGACCTACCTATAATCTCACTGGAGCatctgaaagcacatctcattgaaaaacacaaaaagaaaatcatcctaaaatcccaccttgggatactccctttcagaatcaacgtagacgattacaaatgcgtaatttgcgatgaaaagtacggagaatacaagactttaaaccatcacatgaacgttcattttcagaactttatttgtgaacaatgcggttctggtttcataacccccgcacggttacgggtccactgcttcacccacgaaaccggttcgttcccttgcagcgattgtaacaaagtctttcgctccagcaatgcaaataaagaacactacgctgacgtacacttaaaggtgaaaagacacagatgccctcaatgccctgagacgttcagaaactactttcaaagaactaaacacatatctatcgctcacggggtcaagttgaaagaattcaagtgtgaatactgccctaaaatcttccactacagcgggaaaatgaccgggcatattcgacatgcgcacctaaaagaaaaacgccatggttgtgacttatgcgactggaaattttactccgcgtatgaattgaaacagcatatggtaaaacacggtggagagagaaagtatcagtgcaatatctgcaagaaagcgtatgcgaggaaatatacgttgcgagagcatatgaggatacatgagaatgatagaagatttgtttgcacggtttgcgggaagtcgtttgtgcaggcgtgtaGAAACCAAAAAGCTGCGTCGAAGCAAACGAGAATTGTGCCACTCTTCCAAGTGGCTTACGATCGCAGCCTCTGCAAACCTCTCGGAACGATCACAGACTTCAGTAAACTGCAGAGAACACAGAATATATCACTCTCAGACACTATCATGTACGAAAACTCTCGAAGCCCATCGCCAGTTTGTCCCAGAACCCCATCACCGTACGCTCCCGAAGAACAAACAGACATCAATCCACCTGCGAAGTATCTACTAAAACAACAACCTGCGAGAAAGATCTCAGATTGCAGACAGAATGCTCTCATAGTCTTCGAATACTCAACCGCCTACCCTTTTATATTCTCAAACAACAGTTACAGATGCTTTGTCTGCTCCCAATCGTATTTAGACGTTCCGACCCTTAAGGTCCACATGTCAGAACACCCTTTCGCTCACATCAAACGACTAATGAACAACAGAAAAGAGAATGTTCTTAAAGTTGACGTCAGCGAACTGACTTGCAAACTCTGCATGCTGCCTCTGAGAGATCTGGTCGTATTGAAGCATCATCTCAAAAACGAGCACAATAAGCCGGTAGATACAGAGCTCCAAGACAACCTGGTGCCTTACGATCTGACCATACACGGTCCTGAGGGGTACCAGTGCGCTGTTTGCGAGCAGACCTTCATCAAAGTCCGTATCCTCGTGATTcatatgagcgatcacttcagcaactatagctgtgaagtctgcggatcaggtttcatgacgttacgactgctaaagaagcatctggaagtccacgagacgggaaatttcccttgcgatcgttgcagcaaaatatttagcactacgcacaaaaGGGCTTTGCATATCCGCGGGGTTCATATGAAATTGTGCCCGCGGCGATGTCCTATGTGCCCGGAGCGGTTCAACTCTAACTACAAAAGGACTATACACCTCCAAGACGTGCACAACCAATCCACCAGAGTCCATAAATGTAAGACGTGTGGTCGTGGTTTCCATCTCAAGTATCATTTGATAAGCCACGTGCGTTCCGTGCATTTGCAAGAGCGGAATCAACAGTGCGATGTGTGTCTACAAAGGTTTTCTAATAAGGAGTCCTTGAAGCGACATATGGTCGTTCATACGGGAGAGAAAAACTATAAATGTGAAGTTTGTGGAATGGCGTTCTTGAGACGAAAGAATTTGAAGGATCATTTACGTTTGCATGAGATTCATTGA
- Protein Sequence
- MQMLASYMFVCEICGAKFFSRSELVKQHMPKHTVGRSFECVDPHETKEDTLTQNNTGTQTLTVVNKTDPEEQDRKDSVLTLLECSRICPFKWAKNLYFCIYCEESFADPAKLRKHIFAEHDNIQPEEIKQRLILIGRKRHEFLKTDITDLSCKLCDLPIISLEHLKAHLIEKHKKKIILKSHLGILPFRINVDDYKCVICDEKYGEYKTLNHHMNVHFQNFICEQCGSGFITPARLRVHCFTHETGSFPCSDCNKVFRSSNANKEHYADVHLKVKRHRCPQCPETFRNYFQRTKHISIAHGVKLKEFKCEYCPKIFHYSGKMTGHIRHAHLKEKRHGCDLCDWKFYSAYELKQHMVKHGGERKYQCNICKKAYARKYTLREHMRIHENDRRFVCTVCGKSFVQACRNQKAASKQTRIVPLFQVAYDRSLCKPLGTITDFSKLQRTQNISLSDTIMYENSRSPSPVCPRTPSPYAPEEQTDINPPAKYLLKQQPARKISDCRQNALIVFEYSTAYPFIFSNNSYRCFVCSQSYLDVPTLKVHMSEHPFAHIKRLMNNRKENVLKVDVSELTCKLCMLPLRDLVVLKHHLKNEHNKPVDTELQDNLVPYDLTIHGPEGYQCAVCEQTFIKVRILVIHMSDHFSNYSCEVCGSGFMTLRLLKKHLEVHETGNFPCDRCSKIFSTTHKRALHIRGVHMKLCPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCKTCGRGFHLKYHLISHVRSVHLQERNQQCDVCLQRFSNKESLKRHMVVHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00702219;
- 90% Identity
- iTF_00703246;
- 80% Identity
- -