Ealt001235.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- bab1
- Assembly
- GCA_963565295.1
- Location
- OY751375.1:15436221-15439048[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-17 1.4e-14 54.1 0.0 1 43 31 74 31 76 0.95 2 2 4.8 4e+03 -1.8 1.6 6 15 170 179 166 181 0.83
Sequence Information
- Coding Sequence
- ATGCAGTCCCTGTGGCAACAATGCTGGAGCACCAATCAGAACATGGTACACAACTTGCGCCTGCGAGAGCGTGGACCACTTAAGTCCTGGAGGCCAGAAACAATGGCCGAGGCCATCTTCTCCGTGCTAAAAGAAGGGCTATCGCTGTCGCAAGCCGCTAGGAAGTACGACATTCCATACCCAACGTTTGTACTCTACGCAAATAGAGTGCACAATATGCTTGGTCCAAGCGCCGACGGGGGAGCAGATCTGAGACCCAAAGGGCGCGGCCGTCCGCAGAGAATACTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTCGTGTTCCGCGAGACCCACACGCACACCGCGCACACGCACCTGCGCGAAGTCGAGATGCCCGCCTACCCTGCCATCACGGACGGCGCCGTCGCGGTCGGGCCTAGCCCCGGCGCGGGCAGCAACAGGTGCGGAAACGGACGTGAGGGGCGCGTGTCGCCGaacgcggccgccgccgccgctgtcGCCGCCGTCGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCATCCGACCACCCGCCGCACCTTGGCCTGCCACCGCTGCCGCTGCACTCCCCGCGGCTGCCGTCGCCTATGACCGCGGGCCTGGAGTCGCCGCTGTGCTCGCCGCCTCCGCCGGGACACGCACTTGAACCGGCGCGCCCCGCGGAGCCCTTCCGCCCGTTTGCCTCCCCGCGCCCCGACAGCCGCTACAGCGAGCGCGACTCGACCGAGATGGGCCCCCCGAAGACCCCCGTATCTCGCAACGGGCAGGGCACCTCGCCCGCCTCGATGGACGCGGAGCCGTCGGTAACGGACGCGGCGCGTATGGACATATGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRETHTHTAHTHLREVEMPAYPAITDGAVAVGPSPGAGSNRCGNGREGRVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPSDHPPHLGLPPLPLHSPRLPSPMTAGLESPLCSPPPPGHALEPARPAEPFRPFASPRPDSRYSERDSTEMGPPKTPVSRNGQGTSPASMDAEPSVTDAARMDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377025; iTF_00361537; iTF_01509510; iTF_00267111; iTF_01528206; iTF_00662159; iTF_01529119; iTF_00856520; iTF_00697255; iTF_00702820; iTF_00638575; iTF_00701872; iTF_00698195; iTF_01335849; iTF_00704876; iTF_00935601; iTF_00390306; iTF_00649030; iTF_00825514; iTF_00044383; iTF_00666432; iTF_01172256; iTF_00206922; iTF_00649939; iTF_00055319; iTF_00318034; iTF_00686258; iTF_00913528; iTF_01182593; iTF_00119530; iTF_00250386; iTF_00032829; iTF_00321523; iTF_00926518; iTF_00635308; iTF_01208036; iTF_01209130; iTF_00033743; iTF_00143006; iTF_00634238; iTF_00826752; iTF_00699100; iTF_00700932; iTF_00703859; iTF_00700020; iTF_00205981; iTF_01171389; iTF_00663007; iTF_01428976; iTF_00790175; iTF_00791120; iTF_01170495;
- 90% Identity
- iTF_00318034;
- 80% Identity
- -