Bstr021042.1
Basic Information
- Insect
- Biston stratarius
- Gene Symbol
- bab1
- Assembly
- GCA_950106695.1
- Location
- OX467118.1:10084690-10090158[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.2e-14 54.2 0.0 1 43 31 74 31 76 0.95 2 2 3.7 3.5e+03 -1.7 1.6 6 15 170 179 166 181 0.83
Sequence Information
- Coding Sequence
- ATGCAATCGCTGTGGCAACAATGCTGGAGCACAAATCAAAACATGGTCCACAACTTACGGCTCCGAGAGCGCGGCCCGTTGAAGTCCTGGAGGCCGGAGACAATGGCCGAAGCGATCTTCTCGGTCCTGAAAGAAGGCCTGTCTCTCTCACAAGCTGCGAGGAAGTACGACATCCCGTACCCGACGTTTGTGCTGTACGCGAATCGCGTCCACAACATGCTGGGCCCCAGCGCTGATGGAGGAGCAGATTTGAGACCAAAGGGACGCGGAAGACCTCAGCGCATCCTTCTCGGCGTGTGGCCGGATGACCACATTCGGGGGGTGATCCGCGCGGTAGTGTTCCGCGAGAACCACACACCACACACCACTCACCACCTGCGCGAGGTGGACATGCCGCTACCGTACCCTGCCATCACGGACGGTGTAAACCAGGCGCCGCCGGCCAATATCGGCGGGAACGGATGTGGAAACGGACGCGAAGGGCACGTGTCGCCAAACGCGGCGGCGGCCGCTGCCGTAGCCGCAGTGGCGCACGGTCTGCGCCGTCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCACAAGAGCACCCCGGACACGTGGGGCTGCCGCTCACCGCCGGGCTCGAGTCGCCGCTGTgctcgccgccgccgccggggcTTGCGCTCGAGCCTGCGCGCCCCGCAGAGCCGTTCCGCCCGTTTGCCTCTCCGCGCCCCGACAGCCGCTACAGCGACCGCGACACCGGCGACATGGGCCCGCCCAAGACGCCCGTGTCCCGTAACGGGCAAGGCGCATCGCCCATCGAAGCTGATCCGTCTGTGACGGACGCCGCGCGAATCGACATATGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRENHTPHTTHHLREVDMPLPYPAITDGVNQAPPANIGGNGCGNGREGHVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPQEHPGHVGLPLTAGLESPLCSPPPPGLALEPARPAEPFRPFASPRPDSRYSDRDTGDMGPPKTPVSRNGQGASPIEADPSVTDAARIDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661203;
- 90% Identity
- iTF_00649030; iTF_00935601; iTF_00205981; iTF_01208036; iTF_00390306; iTF_01209130; iTF_00649939; iTF_00635308; iTF_00825514; iTF_00250386; iTF_00143006; iTF_00634238; iTF_00666432; iTF_00826752; iTF_01172256; iTF_00032829; iTF_00033743; iTF_00913528; iTF_00044383; iTF_00055319;
- 80% Identity
- -