Arep000369.1
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- bab1
- Assembly
- GCA_949125135.1
- Location
- OX421221.1:3682992-3693261[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-17 3.8e-14 52.8 0.0 1 43 31 74 31 76 0.95
Sequence Information
- Coding Sequence
- ATGCAGTCGCTGTGGCAGCAATGCTGGAGCACCAACCAGAACATGGTGCACAACCTGCGTCTGCGTGAGCGCGGCCCGCTGAAATCCTGGCGCCCGGAGACCATGGCCGAAGCCATCTTCTCGGTCCTGAAGGAGGGCCTGTCGCTGTCGCAAGCGGCGAGGAAGTTCGACATCCCATACCCGACGTTCGTACTTTACGCCAACCGAGTCCACAACATGCTGGGCCCCAGCGCCGACGGAGGAGCAGATCTGAGACCCAAGGGACGCGGGAGACCCCAGCGCATCCTGCTGGGAGTGTGGCCGGACGAGCACATCCGGGGCGTGATCCGCGCGGTGGTGTTCCGCGAGAACCACGTGCCTCACAACACGCACCACATGCGTGAAGTGGAGATGCCTCTCCCCTACCCTGCCATCACGGATGGCGTGAACCAGGCGCCGCCTGCCACAATCGGTGGAAACGGGTGTGGGAACGGACGCGAAGGGCATGTGTCGCCGAAtgcagccgccgccgctgccgtaGCCGCCGTGGCGCACGGGCTGCGCCGCCAAATGTGCAACATGGTGGTAGCGGCGCAGCGGCCCCAGGAGCATCCCGGGCACGTAGGACTGCCGCCGATGCCGATGCACTCGCCGCGGCTGCCATCGCCGCTCACTACCGGAATGGAGTCACCGCTATGCTCGCCGCCACCACCCGGACACGCGCTCGAACCAGGCCGCCCGGCGGAGCCGTTCCGCCCGTTCGCCTCCCCACGACCCGACAGCCGCTACAGCGACATCACCGACATGGGCCCGCCAAGGACGCCGGTTTCCCGCAACGGACAAGGCGCCTCGCCTATCGAGGCTGACCCGTCTGTCATGGACGCCGCTCGTTTCGACATATGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRENHVPHNTHHMREVEMPLPYPAITDGVNQAPPATIGGNGCGNGREGHVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPQEHPGHVGLPPMPMHSPRLPSPLTTGMESPLCSPPPPGHALEPGRPAEPFRPFASPRPDSRYSDITDMGPPRTPVSRNGQGASPIEADPSVMDAARFDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661203;
- 90% Identity
- iTF_00206922;
- 80% Identity
- -