Cleg002036.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- bab1_1
- Assembly
- GCA_947359385.1
- Location
- OX375762.1:13161452-13165462[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.5e-18 9.3e-15 54.1 0.0 1 43 31 74 31 76 0.95 2 2 2.8 2.8e+03 -1.8 1.6 6 15 171 180 167 182 0.83
Sequence Information
- Coding Sequence
- ATGCAATCGCTGTGGCAGCAATGCTGGAGCACCAATCAGAACATGGTGCACAATCTGCGCCTCCGAGAGCGCGGACCTCTCAAATCCTGGAGACCCGAAACAATGGCAGAGGCCATCTTCTCCGTGCTGAAGGAGGGCCTGTCGCTATCGCAGGCCGCGCGCAAATACGACATTCCCTACCCAACGTTCGTACTGTACGCGAACCGCGTGCACAACATGTTGGGACCGAGCGCCGACGGGGGAGCAGATTTGAGACCAAAAGGACGCGGTCGCCCCCAGAGAATATTGCTGGGTGTGTGGCCCGACGATCACATCCGCGGCGTCATCCGAGCGGTCGTGTTCCGGGAGACGCACGGACCCCACACCGCGCATCACTTGCGCGAGGTCGAGATGCCAGTCTACCCAGCCATCACGGACAACGTGGGCGTGGGCGGTCCGAACCCGGTGCCCGTGGGGGGTAACGGGTGCGGTAACGGACGCGAAGGACGCGTTTCGCCGAACGCCGCCGCCGCCGCCGCGGTGGCCGCCGTCGCTCACGGGCTGCGCCGCCAGATGTGCAACATGGTAGTGGCGGCGCAGCGGCCGCCCGACCACTCGCCGCACCTGGGCCTGCCGCCGCTGCCGCTGCACTCGCCGCGGCTGCCCTCGCCCATGACCGCCGGCCTCGAGTCCCCGCTGTGCTCGCCGCCGCCACCGGGCCACGCGCTGGAGCCCACGCGCCCCGCTGAACCCTTCCGACCTTTCGCCTCGCCCCGACCCGACAGCCGCTACAGCGACCGCGACGCCGCCGAGATGGGACCGCCGAAGACCCCTCTCTCCCGCAACGGGCAGGGCGCCTCGCCCGCCTCCATCGACGCCGACCCCTCGGTGACGGACGCGACTCGTATGGACATATGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRETHGPHTAHHLREVEMPVYPAITDNVGVGGPNPVPVGGNGCGNGREGRVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHSPHLGLPPLPLHSPRLPSPMTAGLESPLCSPPPPGHALEPTRPAEPFRPFASPRPDSRYSDRDAAEMGPPKTPLSRNGQGASPASIDADPSVTDATRMDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661203;
- 90% Identity
- iTF_00361537; iTF_01182593; iTF_00119530; iTF_00856520; iTF_01335849; iTF_00663007; iTF_00632682; iTF_00737390; iTF_01219707; iTF_00267111; iTF_01528206; iTF_00662159; iTF_01529119; iTF_00686258; iTF_00661203; iTF_01428976; iTF_00321523; iTF_00926518;
- 80% Identity
- -