Celi021728.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- bab1
- Assembly
- GCA_907269065.1
- Location
- OU026077.1:15986699-16007223[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-18 1.7e-14 53.8 0.0 1 43 84 127 84 129 0.95 2 2 4 7e+03 -2.5 2.0 6 15 223 232 219 233 0.82
Sequence Information
- Coding Sequence
- ATGCTTGCACACTTCCGCTTGGCGGCAGACTTCACTCTCAAAGCGGTGGTAACAACACAGGCGGACACTCGCAGAAGAGCTCGCATGATGGAAAACACACAGGCTTGGATGGGGGCCTCCACGTCCACGGCCCTGGCAGCAGAGACGTACCAGTATCGCATGCAGTCGCTGTGGCAGCAATGCTGGAGCACCAACCAGAACATGGTGCACAACCTGCGACTGCGAGAGCGTGGACCCCTCAAGTCCTGGCGACCCGAGACCATGGCTGAGGCCATCTTCTCCGTGCTGAAAGAAGGCCTGTCGCTGTCCCAAGCGGCGAGAAAGTACGACATCCCGTATCCGACCTTCGTGCTTTACGCCAACCGTGTCCACAACATGCTGGGCCCCAGCGCCGACGGAGGAGCAGATTTGAGACCGAAAGGACGTGGAAGGCCGCAGCGCATCTTGCTGGGTGTTTGGCCTGATGACCACATCAGGGGCGTGATCCGCGCCGTGGTGTTCCGAGAGAACCACACCCCCCACACCACACACCATCTGAGGGAGGTCGACATCCCGCTACCGTACCCTGCCATCACGGATGGCGTGAATCAGCCGCCGCCCGCGGTGATCGGGGGCAACGGGTGCGGCAATGGGCGCGAAGGGCACGTGTCGCCGAATGCCGCCGCCGCCGCTGCCGTGGCAGCCGTAGCACACGGGCTCCGCCGTCAGATGTGCAACATGGTGGTGGCAACGCAGCGGCCGCAGGAACACCCCGGGCATGTGGGACTGCCGCCGCTGCCGCTGCACTCTCCGCGCATGCCTTCGCCGCACACCGCCGGCCTGGAGTCACCGCTGTGCTCGCCGCCGCCGCCGGGCCACGCGCTCGAGCCGACGCGCCCCGCGGAGCCGTTCCGCCCCTTCGCCTCCCCACGACCCGATAGCCGCTACAGCGACCGTGATATCACCGAGATGGGCCCGCCCAAGACCCCTGTCTCGCGCAACGGGCAGGGCGCGTCTCCGATCGAGGCTGACCCGTCAGTGACGGACGCGCACATATGA
- Protein Sequence
- MLAHFRLAADFTLKAVVTTQADTRRRARMMENTQAWMGASTSTALAAETYQYRMQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRENHTPHTTHHLREVDIPLPYPAITDGVNQPPPAVIGGNGCGNGREGHVSPNAAAAAAVAAVAHGLRRQMCNMVVATQRPQEHPGHVGLPPLPLHSPRMPSPHTAGLESPLCSPPPPGHALEPTRPAEPFRPFASPRPDSRYSDRDITEMGPPKTPVSRNGQGASPIEADPSVTDAHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661203;
- 90% Identity
- iTF_00206922;
- 80% Identity
- -