Esub001452.1
Basic Information
- Insect
- Eupithecia subfuscata
- Gene Symbol
- bab1
- Assembly
- GCA_963564075.1
- Location
- OY751095.1:3227538-3232889[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 1.6e-14 54.1 0.0 1 43 31 74 31 76 0.95
Sequence Information
- Coding Sequence
- ATGCAGTCCCTCTGGCAGCAATGCTGGAGCACTAATCAGAACATGGTGCACAATCTGCGCCTGCGCGAGCGCGGGCCTCTCAAGTCCTGGAGGCCAGAAACCATGGCCGAGGCCATCTTCTCCGTGCTCAAGGAAGGCCTATCGCTGTCCCAAGCCGCTAGAAAATACGACATACCGTACCCTACGTTCGTACTGTACGCTAACCGGGTCCACAACATGTTGGGCCCGAGCGCTGACGGGGGAGCAGATTTGAGACCGAAAGGACGCGGGCGCCCGCAGAGAATACTGCTTGGCGTGTGGCCGGACGACCACATCCGGGGCGTGATCCGCGCTGTGGTGTTCCGCGAGACGCAAGGGCCGCTCAACACGCACGCGCAGATGCGCGAGGTCGAGATGCCGTCCTACCCTGCCATCACGGACGCTGCGAGTGGGCCGAGTGCTGTGCCCGTGGGGGGTAACGGATGTGGAAACGGTCGCGACGGGCGCGTGTCCCCGAACGCCGTGGCCGCTGCCGCGGTCGCTGTGGCACACGGGCTGCGGCGCCAGATGTGCAACATGGTGGTGGCGGCCCAGCGGCCGTCCGACCACCCGCCGCACCTGGGTCTGCCGCCGCTGCCACTGCACTCGCCGCGCCTGCCCTCGCCGTTGACTGCCGGCCTGGAATCGCCGCTATGCTCACCACCACCTCCGGGCCACGCTCTAGAGCCAGGGCGGCCCTCCGAACCCTTCCGCCCGTTCGCCTCCCCTCGCCCTGACAGCCGCTATAGCGAGCGCGACTCCGCCGAGATGGGTCCACCGAAGACCCCCGTCTCCCGCAACGGACAGGGTGCCTCACCCGCCTCCGTGGACACCGACCCGTCCGCGACGGATGCACGTATGGACATATGA
- Protein Sequence
- MQSLWQQCWSTNQNMVHNLRLRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRETQGPLNTHAQMREVEMPSYPAITDAASGPSAVPVGGNGCGNGRDGRVSPNAVAAAAVAVAHGLRRQMCNMVVAAQRPSDHPPHLGLPPLPLHSPRLPSPLTAGLESPLCSPPPPGHALEPGRPSEPFRPFASPRPDSRYSERDSAEMGPPKTPVSRNGQGASPASVDTDPSATDARMDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00661203;
- 90% Identity
- iTF_00697255; iTF_00698195; iTF_00700020; iTF_00700932; iTF_00699100; iTF_00704876; iTF_00703859; iTF_00377025; iTF_01161238; iTF_01099773; iTF_00810920;
- 80% Identity
- -