Basic Information

Insect: Ephialtes manifestator
Gene Symbol: -
Assembly: GCA_963970395.1
Location: OZ019970.1:38059750-38062048[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.033 6.3 8.9 0.5 2 23 162 183 161 183 0.97

2 14 1.1e-05 0.0022 19.8 1.4 2 23 193 214 192 214 0.98

3 14 0.029 5.5 9.0 2.7 2 23 221 241 220 241 0.94

4 14 1.3e-05 0.0024 19.6 1.4 2 23 330 351 329 351 0.97

5 14 1.2e-05 0.0023 19.7 0.6 1 23 388 410 388 410 0.97

6 14 2.9e-06 0.00055 21.6 1.7 1 23 416 438 416 438 0.96

7 14 4.3e-05 0.0081 18.0 0.6 1 23 444 466 444 466 0.98

8 14 4.3e-05 0.0082 17.9 5.3 1 23 472 494 472 494 0.97

9 14 1.1e-07 2.1e-05 26.1 1.0 1 23 499 521 499 521 0.97

10 14 0.0003 0.057 15.3 0.2 1 23 527 549 527 549 0.97

11 14 1.2e-07 2.2e-05 26.0 3.8 1 23 555 577 555 577 0.96

12 14 5.7e-06 0.0011 20.7 1.6 1 23 583 605 583 605 0.98

13 14 2.2e-05 0.0043 18.8 1.1 1 23 611 633 611 633 0.94

14 14 0.00083 0.16 13.9 1.5 1 23 639 662 639 662 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.033	6.3	8.9	0.5	2	23	162	183	161	183	0.97
2	14	1.1e-05	0.0022	19.8	1.4	2	23	193	214	192	214	0.98
3	14	0.029	5.5	9.0	2.7	2	23	221	241	220	241	0.94
4	14	1.3e-05	0.0024	19.6	1.4	2	23	330	351	329	351	0.97
5	14	1.2e-05	0.0023	19.7	0.6	1	23	388	410	388	410	0.97
6	14	2.9e-06	0.00055	21.6	1.7	1	23	416	438	416	438	0.96
7	14	4.3e-05	0.0081	18.0	0.6	1	23	444	466	444	466	0.98
8	14	4.3e-05	0.0082	17.9	5.3	1	23	472	494	472	494	0.97
9	14	1.1e-07	2.1e-05	26.1	1.0	1	23	499	521	499	521	0.97
10	14	0.0003	0.057	15.3	0.2	1	23	527	549	527	549	0.97
11	14	1.2e-07	2.2e-05	26.0	3.8	1	23	555	577	555	577	0.96
12	14	5.7e-06	0.0011	20.7	1.6	1	23	583	605	583	605	0.98
13	14	2.2e-05	0.0043	18.8	1.1	1	23	611	633	611	633	0.94
14	14	0.00083	0.16	13.9	1.5	1	23	639	662	639	662	0.92

Sequence Information

Coding Sequence: ATGGAAGATTTTAGAGTGAAAGACGGGCCAATGGATGCACTAGCTATTAGCAGTCAGGTTATGGATGAAAACATTGTCAGCGTCGTGCTTAAGGAAGAACCCGCAGACAGATTTGGTCACTCGTACATCGAGGATATCTGTTCAGGAACATTTGGAAAGGTTTTCCTACCGATCGACAGTCATGAAGTGGATTTCACGGATGAAATGGTCAAACTGGAACTAGAGAGTCAAGCGAGCGGACATCATAACTGGGCTGCTCAATTAGCCACTGCAACATTGTGCGATCGAGCGGACGCAACAGCTCACAGGTGTCTTCCATCGGGTGTGCAATTTGGTCAATTAGGGCAAAAATCTggagaggaggaagaggaggtgGATGACGAGGACCCTGACGTTTTAGAGGAAAAAGAGGATCGCGATCGGGAGGATAAGGACAAGGACAGAGGTGAGGATTGGTTGCACCAGCCAAAGTTCTACAAGATCCAGTGTTCAATCTGCAAAAAGTGGTTTCTCAATAACGACTCGATGATAACGCATCTGAGAAGCCACTGCGGCGGTAATGTCGCAAGTGGCGATCAGTGCCAAGTATGCCAGCAGAGTTTTCAGGACAATTCGAGTTTGCACGCTCATATGTTGACTCACGTCGGTATGAATCCCGTCGAATGCAACATATGCCAAAAGAGATTCGCTTACAAGTGTTTGCGAAATCACGTACAGACTCACGTAGCCGCAGCGGCAGCCGCGAGTAAACCGTTTGAGAATTGTTGTCCCACGGGAATCGGCGGTATCGGTGGAATCGTCGGAACCGGAGTTGCCGCTGGCTCTATTGGCATCGGCGCTGATTATAGCTTTGAAAACTCCAGCGATACCGCGAGAAAAATGTACAACGAACGCACGAATCTCGGGGACGAGAGAAGAAAAGACATAATGCAGAGTAATAACAAAACTGAAAGCGACgcgagaggaggaggaggaggaggaggattaCGATGCGATATATGCAAAATGCGATTCAAAGATAGAGACACTCTTAATCGTCACACTCTCATGCATATGAGCGAAGGACCATACAAGTACGATATTTTTTCCGGGACTTTCAGAGACAAACCTGAAAGCGTCAATATGCAACGTGTACACGCTACACATACGGGCGTTAAGCAATTTAAATGCACACTTTGCGAACGTTCCTTCGGTCAGCGAACGGCGCTTAATAATCACATGCTCGCTCATAGTGGCGAAAAGCCTCACGCTTGTAGTGTCTGCGAAAAGACATACAAACGTAAATCCGAATTGATAAGACACACGATGGTTCACACCGGTGAAAGGCCTTACGAGTGCAAAGAGTGTCTAATGACATTTCGCGAGAAAGCTAAATTAAACTCACACATGCTCGTTCACACGGGGGAAAAACCTCACGAGTGTTACATTTGTCACAAGGCTTGCGCTCGTAAATCCGATCTTAATAGTCATATGCTATCGCACACTGGCGGTCAGTACGATTGCAAAGTTTGCGACAAAATTTTCACCCGAAAATCCGATCTCAACAGGCACACGTTGATTCACACGGGAGAAAAACCATTTGCCTGCGAACTCTGCGATATGGCGTTTCGGGAAAGAACACGCTTAAATTCTCACATGCTCGTTCACACCGGCGACAAAAGACACGCGTGTCACATATGCGGCAaaagttttcgtgaaaaatcgaGTCTGAAGAAGCACATGCTCATTCATACCGGGGACAGACCGTACGAGTGCTTCGTTTGTAAAAAAACTTTCACCCAGAAGACAACGTTGAATAGTCACGTACTCGTGCACACCGGTGAACGACCTTACGAGTGTGAAACCTGCCCAAAAGCGTTTAGGGAAAGATCGTCGTTGAGAAAACATTCGTTATTTCATACTTCAGAACGGGGTCACGAGTGCAATGTGTGCTTCAAAAAGTTTACTCACAAGGCTGACCTCGGCTCTCACGCCGCTATCGATCATCCTTCATAG
Protein Sequence: MEDFRVKDGPMDALAISSQVMDENIVSVVLKEEPADRFGHSYIEDICSGTFGKVFLPIDSHEVDFTDEMVKLELESQASGHHNWAAQLATATLCDRADATAHRCLPSGVQFGQLGQKSGEEEEEVDDEDPDVLEEKEDRDREDKDKDRGEDWLHQPKFYKIQCSICKKWFLNNDSMITHLRSHCGGNVASGDQCQVCQQSFQDNSSLHAHMLTHVGMNPVECNICQKRFAYKCLRNHVQTHVAAAAAASKPFENCCPTGIGGIGGIVGTGVAAGSIGIGADYSFENSSDTARKMYNERTNLGDERRKDIMQSNNKTESDARGGGGGGGLRCDICKMRFKDRDTLNRHTLMHMSEGPYKYDIFSGTFRDKPESVNMQRVHATHTGVKQFKCTLCERSFGQRTALNNHMLAHSGEKPHACSVCEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCDMAFRERTRLNSHMLVHTGDKRHACHICGKSFREKSSLKKHMLIHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKAFRERSSLRKHSLFHTSERGHECNVCFKKFTHKADLGSHAAIDHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00459948; iTF_01207553; iTF_01364835; iTF_00058120; iTF_00721430; iTF_00058879; iTF_00841282; iTF_00905572; iTF_00059609; iTF_00397502; iTF_00398274; iTF_01497642; iTF_00343337; iTF_01379452; iTF_00414495;
90% Identity: iTF_01497642;
80% Identity: -