Basic Information

Insect: Cryptus viduatorius
Gene Symbol: -
Assembly: GCA_964006125.1
Location: OZ023222.1:11265365-11267827[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.029 2.5 9.0 0.6 2 23 174 195 173 195 0.97

2 14 4.6e-05 0.0041 17.8 1.5 2 23 205 226 204 226 0.98

3 14 3.7e-05 0.0033 18.1 2.0 2 23 233 254 232 254 0.97

4 14 1.3e-05 0.0011 19.6 1.1 2 23 331 352 330 352 0.96

5 14 3.7e-06 0.00033 21.3 0.5 1 23 386 408 386 408 0.97

6 14 1.1e-06 9.8e-05 22.9 1.8 1 23 414 436 414 436 0.96

7 14 4.2e-05 0.0037 18.0 0.6 1 23 442 464 442 464 0.98

8 14 4.2e-05 0.0038 17.9 5.3 1 23 470 492 470 492 0.97

9 14 1.1e-07 9.6e-06 26.1 1.0 1 23 497 519 497 519 0.97

10 14 0.00029 0.026 15.3 0.2 1 23 525 547 525 547 0.97

11 14 1.4e-07 1.3e-05 25.7 3.9 1 23 553 575 553 575 0.96

12 14 5.5e-06 0.00049 20.7 1.6 1 23 581 603 581 603 0.98

13 14 2.2e-05 0.002 18.8 1.1 1 23 609 631 609 631 0.94

14 14 0.00076 0.067 14.0 1.6 1 23 637 660 637 660 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.029	2.5	9.0	0.6	2	23	174	195	173	195	0.97
2	14	4.6e-05	0.0041	17.8	1.5	2	23	205	226	204	226	0.98
3	14	3.7e-05	0.0033	18.1	2.0	2	23	233	254	232	254	0.97
4	14	1.3e-05	0.0011	19.6	1.1	2	23	331	352	330	352	0.96
5	14	3.7e-06	0.00033	21.3	0.5	1	23	386	408	386	408	0.97
6	14	1.1e-06	9.8e-05	22.9	1.8	1	23	414	436	414	436	0.96
7	14	4.2e-05	0.0037	18.0	0.6	1	23	442	464	442	464	0.98
8	14	4.2e-05	0.0038	17.9	5.3	1	23	470	492	470	492	0.97
9	14	1.1e-07	9.6e-06	26.1	1.0	1	23	497	519	497	519	0.97
10	14	0.00029	0.026	15.3	0.2	1	23	525	547	525	547	0.97
11	14	1.4e-07	1.3e-05	25.7	3.9	1	23	553	575	553	575	0.96
12	14	5.5e-06	0.00049	20.7	1.6	1	23	581	603	581	603	0.98
13	14	2.2e-05	0.002	18.8	1.1	1	23	609	631	609	631	0.94
14	14	0.00076	0.067	14.0	1.6	1	23	637	660	637	660	0.92

Sequence Information

Coding Sequence: ATGCAAGGTTATGACTACGGATCGGTCAAGGATCGCGGCTGTTCGGAACTCCGTGAGATTGATAATATGggtgaaaaaaaagagacgagacCCCCAATGGATGCGCTAACCGTGTGCAGTCAGGTTATGGATGAAAACATTGTCAGCGTCGTGCTTAAGGAAGAACCCGGCGACAGATTCGCTCAATCGTACATCGAAGATATCTGTTCGGGAACGTTTGGCAAGGTTTTCCTACCGATCGACGCTCACGAAGGGGATTTCACGGATGAAATGGTCAAACTGGAACTAGAGAGTCAATCGAGTGGACATCATAACTGGGCAGTTCAATTAGCCGCCGCGTCTCTCTGTGAGCGTATCGAAGGCGCGACGCAAACTCGTTCTCAGTACGGCGGTCAGTTAGGACAAAAATCCACTGTCGAcgtcgaggaagaagaagaacgagtGGAAGAAGAGGAGCAACGAAGCGTCGACAAGGAAGAAGAGGACGAATCGTCGAATCGTCAAAAATTCTACAAGATACAGTGCACAATCTGCAAAAAGTGGTTTCTTAACAACGACTCGATGATAACGCATTTGAGGAGCCACTGCGGCGGTAACGTCGGCGGTGGCGATCAGTGTCAAGTATGTCAGCAGAGCTTTCAGGACAACACGAGTTTACACGCCCACATGTTAACGCACGTCGGTATGAATCCGGTGGAATGCAACATTTGCCAAAAGCGTTTCGCTTACAAGTGGTGTTTGCGAAATCACGTGCAAACGCACGTCGCGGCGAACAACAAACCATTCGAGAATTGTTGTCCGAGCGGCGGCGGGGGCGGCGGGGGTGTTGGGGGCGTTGGGGGTGTAGGAATCGGCGTGGGTGTCGGGGTCGGGGGTGGTTACGGCTTCGACAATAGCGCGGATGCAACGAGAAAGATGTACGCGAACGAGGATCGTAGAAAGGAGGGGATGAGCAACAATAAACCCGAAGCGGACGCTCGCGGGGGTCTCAGATGCGATATTTGTAAAATGCGCTTCAAAGACAGAGACACGCTGAATCGGCACACATTGGTGCATATGAGCGAAGGACCCTAcaaatacgatatattttcagCGACTTTTCGCGACAAACCGGAAAATAACGCGCGTATGCCGGCGCACGGGGGTATGAAACAATTCAAATGCACGCTATGCGAAAGATCTTTCGCTCAGCGTACAGCATTGAACAATCATATGCTCGCGCACAGCGGTGAAAAACCTCACGCCTGCAATATATGTGAGAAAACATATAAACGAAAGTCCGAGTTAATAAGACACACGATGGTGCACACGGGGGAACGTCCCTACGAGTGCAAAGAGTGCCTCATGACTTTTCGTGAGAAAGCGAAATTGAACTCTCATATGCTGGTGCATACGGGCGAAAAGCCTCACGAATGTTACATTTGTCACAAAGCTTGCGCCCGAAAATCTGATCTTAACAGTCACATGCTTTCGCACACCGGTGGTCAGTACGATTGCAAAGTTTGCGACAAGATATTCACACGAAAATCCGATCTCAACAGACACACACTTATACACACCGGCGAAAAACCTTTCGCTTGCGAATTATGCGACATGGCTTTTCGCGAGAGAACGCGACTGAATTCTCATATGCTGGTGCACACCGGGGACAAGCGTCACGCTTGTCATATATGCGGCAAAACTTTTAGAGAAAAATCGAGTCTCAAGAAACATATGCTGATTCACACGGGTGATCGTCCCTACGAGTGTTTCGTTTGCAAGAAAACTTTCACCCAGAAAACAACTTTGAATAGTCACGTTCTCGTGCACACCGGCGAACGACCGTACGAGTGCGAAACATGTCCAAAGGCATTTCGCGAAAGATCGTCGTTGAGAAAACATTCTTTGTTTCACACAACGGAACGCGGACACGAGTGCAACGtttgtttcaaaaaatttacccACAAAGCCGATCTCGGCACTCACGCGGCTATCGATCATCCCTCATAG
Protein Sequence: MQGYDYGSVKDRGCSELREIDNMGEKKETRPPMDALTVCSQVMDENIVSVVLKEEPGDRFAQSYIEDICSGTFGKVFLPIDAHEGDFTDEMVKLELESQSSGHHNWAVQLAAASLCERIEGATQTRSQYGGQLGQKSTVDVEEEEERVEEEEQRSVDKEEEDESSNRQKFYKIQCTICKKWFLNNDSMITHLRSHCGGNVGGGDQCQVCQQSFQDNTSLHAHMLTHVGMNPVECNICQKRFAYKWCLRNHVQTHVAANNKPFENCCPSGGGGGGGVGGVGGVGIGVGVGVGGGYGFDNSADATRKMYANEDRRKEGMSNNKPEADARGGLRCDICKMRFKDRDTLNRHTLVHMSEGPYKYDIFSATFRDKPENNARMPAHGGMKQFKCTLCERSFAQRTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCDMAFRERTRLNSHMLVHTGDKRHACHICGKTFREKSSLKKHMLIHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKAFRERSSLRKHSLFHTTERGHECNVCFKKFTHKADLGTHAAIDHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00653024;
90% Identity: iTF_00397502;
80% Identity: -