Basic Information

Insect: Diplazon laetatorius
Gene Symbol: -
Assembly: GCA_963662125.1
Location: OY759156.1:12793472-12795806[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 2.4 8.8 0.5 2 23 161 182 160 182 0.97

2 14 1.1e-05 0.00082 19.7 1.4 2 23 194 215 193 215 0.98

3 14 3.5e-05 0.0027 18.0 2.0 2 23 222 243 221 243 0.97

4 14 1.2e-05 0.00092 19.5 1.1 2 23 359 380 358 380 0.96

5 14 8.6e-06 0.00067 20.0 0.5 1 23 417 439 417 439 0.97

6 14 1e-06 8e-05 22.9 1.8 1 23 445 467 445 467 0.96

7 14 3.9e-05 0.0031 17.9 0.6 1 23 473 495 473 495 0.98

8 14 4e-05 0.0031 17.9 5.3 1 23 501 523 501 523 0.97

9 14 1e-07 7.9e-06 26.0 1.0 1 23 528 550 528 550 0.97

10 14 0.00098 0.076 13.5 0.2 1 23 556 578 556 578 0.97

11 14 3.8e-07 3e-05 24.2 4.3 1 23 584 606 584 606 0.97

12 14 5.2e-06 0.0004 20.7 1.6 1 23 612 634 612 634 0.98

13 14 1.3e-05 0.00098 19.4 1.7 1 23 640 662 640 662 0.94

14 14 0.0003 0.023 15.1 0.3 1 23 668 691 668 691 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	2.4	8.8	0.5	2	23	161	182	160	182	0.97
2	14	1.1e-05	0.00082	19.7	1.4	2	23	194	215	193	215	0.98
3	14	3.5e-05	0.0027	18.0	2.0	2	23	222	243	221	243	0.97
4	14	1.2e-05	0.00092	19.5	1.1	2	23	359	380	358	380	0.96
5	14	8.6e-06	0.00067	20.0	0.5	1	23	417	439	417	439	0.97
6	14	1e-06	8e-05	22.9	1.8	1	23	445	467	445	467	0.96
7	14	3.9e-05	0.0031	17.9	0.6	1	23	473	495	473	495	0.98
8	14	4e-05	0.0031	17.9	5.3	1	23	501	523	501	523	0.97
9	14	1e-07	7.9e-06	26.0	1.0	1	23	528	550	528	550	0.97
10	14	0.00098	0.076	13.5	0.2	1	23	556	578	556	578	0.97
11	14	3.8e-07	3e-05	24.2	4.3	1	23	584	606	584	606	0.97
12	14	5.2e-06	0.0004	20.7	1.6	1	23	612	634	612	634	0.98
13	14	1.3e-05	0.00098	19.4	1.7	1	23	640	662	640	662	0.94
14	14	0.0003	0.023	15.1	0.3	1	23	668	691	668	691	0.92

Sequence Information

Coding Sequence: ATGGAAGATCTTAGCGTGAGAGGGAACGAGCCAATGGATGCGCTAGCTATTAGCAGTCAGGTTATGGATGAAAACATTGTCAGCGTCGTGCTTAAGGAAGAACCCGCAGACAGATTTGGTCATTCTTACATCGAGGATATCTGTTCCGGAACGTTTGGAAAGGTTTTTCTGCCCGCCGACAATCATGAAGTGGATTTCACGGATGAAATGGTTAAACTGGATCTAGAGAGTCAATCGAGCGGACATCACAACTGGGCCGCCCAATTAGCCACCACGACGCTGTGCGAACGTTCCGACGGAGAGACTCACAGGTGTACGCCGTTGGGCGGAGACTTTGACAAATCTGCGGACGAGGAAGACGACGTCGActccaacgacgacgacaacgtaTCCAACGACAAGGAAGACAGATCCCCCGAAGATCAAGACGACGacaaggaagaagaagaacattCGCCGCAACCAAAATTTTACAAGATACAGTGTTCGATTTGCAAAAAGTGGTTTTTGAACAACGATTCGATGATAACCCATTTGAGAAGCCACTGCGGCGGCAAcgtcgccgccgccgccgccgatCAGTGTCAAGTGTGTCAACAAAGTTTTCAAGACAATTCGAGTTTGCACGCTCACATGTTGACCCACGTGGGTATGAATCCGGTCGAGTGTAACATTTGTCAAAAGCGTTTCGCTTACAAATGGTGTTTGAGAAATCACGTGCAGACGCACGCGGTCGGCGCGGCCACCGCGACTACAAAAccgtttgaaaattgttgcgcCACCGGATTAGGCGGAATCGTTGGGAGTAACGGGGCTCAAGGTGCAATGGCGATGGGTGCGGATtatagttttgaaaattccaGCGAATCCACCAGAAAGTTGTACAACGATCGTGCGAACATGAGCGACGACAGAAGAAAAGACATAATGCAGAGTGGCAATAAACCGGATAACGAAGGAAGATCAGTCGTAGGAGGCGGAGGAGGCGGAGGAGGTGGAGGTGGCGCCGGAGGTGGTAGCGGAGGAGGCGCAGGAGGAGGCAGCGGCGGTAGCAGCGGAGGAGGAGGTGGCCTTCGCTGCGACATATGCAAAATGCGTTTCAAAGACCGCGACACCCTCAACCGTCACACCCTCGTTCACATGAGCGAAGGACCCTACAAGTACGACATATTCTCGGCAACCTTTCGCGACAAACCCGAAAGTCCACCGATGCAACGACCCCATCCCACCCAAACCACCGTCAAACAATTCAAATGCAATCTGTGCGAACGTTCGTTCGGTCAGCGCACGGCCCTGAACAATCACATGCTCGCTCACAGCGGTGAAAAACCTCACGCTTGCAACATATGTGAAAAAACTTACAAACGCAAATCCGAATTGATAAGACACACCATGGTGCACACGGGTGAACGTCCGTACGAGTGCAAAGAGTGTCTCATGACGTTTCGCGAAAAAGCCAAATTGAATTCGCACATGCTCGTGCACACGGGTGAAAAACCTCACGAGTGTTACATATGTCACAAAGCTTGCGCCCGTAAATCCGATCTCAACAGTCACATGTTGTCGCACACGGGTGGACAATACGATTGCAAAGTTTgcgacaaaattttcacccGTAAATCGGATTTGAATCGTCACACGTTGATACACACCGGTGAGAAACCGTTTGCTTGTGAATTGTGCGAAATGGCGTTTCGCGAACGCACGCGTTTGAATTCTCACATGTTGGTGCACACGGGCGACAAGAGACACTCGTGTCACATATGCGgcaaaaattttcgtgaaaaatcgagcCTGAAGAAACACATGATCGTACACACGGGTGATCGTCCTTACGAGTGTTTCGTTtgcaaaaaaacttttacccAAAAAACAACGTTGAACAGTCATGTGCTGGTGCACACGGGTGAACGTCCGTACGAGTGCGAGACGTGTCCGAAATCGTTTAGGGAAAGATCGTCGTTGAGAAAACATTCGTTATTTCACACGAATGAACGGGGTCACGAGTGCAACGTTTGTTTCAAAACATTCGCCAGGAAAGCCGATCTTGGATCGCACGCAGCTATCGAACATCCGTCATAG
Protein Sequence: MEDLSVRGNEPMDALAISSQVMDENIVSVVLKEEPADRFGHSYIEDICSGTFGKVFLPADNHEVDFTDEMVKLDLESQSSGHHNWAAQLATTTLCERSDGETHRCTPLGGDFDKSADEEDDVDSNDDDNVSNDKEDRSPEDQDDDKEEEEHSPQPKFYKIQCSICKKWFLNNDSMITHLRSHCGGNVAAAAADQCQVCQQSFQDNSSLHAHMLTHVGMNPVECNICQKRFAYKWCLRNHVQTHAVGAATATTKPFENCCATGLGGIVGSNGAQGAMAMGADYSFENSSESTRKLYNDRANMSDDRRKDIMQSGNKPDNEGRSVVGGGGGGGGGGGAGGGSGGGAGGGSGGSSGGGGGLRCDICKMRFKDRDTLNRHTLVHMSEGPYKYDIFSATFRDKPESPPMQRPHPTQTTVKQFKCNLCERSFGQRTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCEMAFRERTRLNSHMLVHTGDKRHSCHICGKNFREKSSLKKHMIVHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKSFRERSSLRKHSLFHTNERGHECNVCFKTFARKADLGSHAAIEHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00653024;
90% Identity: -
80% Identity: -