Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001248.1:8752620-8754841[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.027 2.3 9.1 0.6 2 23 141 162 140 162 0.97

2 14 4.4e-05 0.0037 17.9 1.5 2 23 172 193 171 193 0.98

3 14 3.5e-05 0.003 18.2 2.0 2 23 200 221 199 221 0.97

4 14 1.2e-05 0.001 19.7 1.1 2 23 299 320 298 320 0.96

5 14 3.5e-06 0.00029 21.4 0.5 1 23 354 376 354 376 0.97

6 14 1e-06 8.7e-05 23.0 1.8 1 23 382 404 382 404 0.96

7 14 4e-05 0.0033 18.0 0.6 1 23 410 432 410 432 0.98

8 14 4e-05 0.0033 18.0 5.3 1 23 438 460 438 460 0.97

9 14 1e-07 8.5e-06 26.2 1.0 1 23 465 487 465 487 0.97

10 14 0.00028 0.023 15.4 0.2 1 23 493 515 493 515 0.97

11 14 1.3e-07 1.1e-05 25.8 3.9 1 23 521 543 521 543 0.96

12 14 5.2e-06 0.00044 20.8 1.6 1 23 549 571 549 571 0.98

13 14 2.1e-05 0.0017 18.9 1.1 1 23 577 599 577 599 0.94

14 14 0.00072 0.06 14.1 1.6 1 23 605 628 605 628 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.027	2.3	9.1	0.6	2	23	141	162	140	162	0.97
2	14	4.4e-05	0.0037	17.9	1.5	2	23	172	193	171	193	0.98
3	14	3.5e-05	0.003	18.2	2.0	2	23	200	221	199	221	0.97
4	14	1.2e-05	0.001	19.7	1.1	2	23	299	320	298	320	0.96
5	14	3.5e-06	0.00029	21.4	0.5	1	23	354	376	354	376	0.97
6	14	1e-06	8.7e-05	23.0	1.8	1	23	382	404	382	404	0.96
7	14	4e-05	0.0033	18.0	0.6	1	23	410	432	410	432	0.98
8	14	4e-05	0.0033	18.0	5.3	1	23	438	460	438	460	0.97
9	14	1e-07	8.5e-06	26.2	1.0	1	23	465	487	465	487	0.97
10	14	0.00028	0.023	15.4	0.2	1	23	493	515	493	515	0.97
11	14	1.3e-07	1.1e-05	25.8	3.9	1	23	521	543	521	543	0.96
12	14	5.2e-06	0.00044	20.8	1.6	1	23	549	571	549	571	0.98
13	14	2.1e-05	0.0017	18.9	1.1	1	23	577	599	577	599	0.94
14	14	0.00072	0.06	14.1	1.6	1	23	605	628	605	628	0.92

Sequence Information

Coding Sequence: ATGGATGCGCTAACCGTGTGCAGTCAGGTTATGGATGAAAACATTGTCAGCGTCGTGCTTAAGGAAGAACCCGGCGACAGATTCGCTCAATCGTACATCGAAGATATCTGTTCGGGAACGTTTGGCAAGGTTTTCCTACCGATCGACGCTCACGAAGGGGATTTCACGGATGAAATGGTCAAACTGGAACTAGAGAGTCAATCGAGCGGACATCATAACTGGGCCGTTCAATTAGCTGCCGCGTCTCTGTGTGAGCGTATCGAAGGCGCGACGCAAGCTCGTTCTCAGTACGCCGGTCAGTTAGGACAAAAGTCTGCAGTCGAcgtcgaggaggaagaagaagttGCGGAGGAGGAGCGACGAAGCGCCGACAAGGACGAAGAGGACGAATCGTCGGGTCGTCAAAAGTTCTACAAGATACAGTGCACAATCTGCAAAAAGTGGTTTCTGAACAACGACTCGATGATAACGCATTTGAGAAGTCACTGCGGCGGCAACGTCGGCGGTGGCGATCAGTGTCAAGTATGTCAGCAGAGCTTTCAGGACAACACGAGTTTGCACGCTCACATGTTGACGCACGTCGGCATGAATCCCGTGGAGTGCAACATTTGCCAGAAGCGCTTCGCTTACAAGTGGTGTTTGCGAAATCACGTGCAAACGCACGTAGCGGCGAACAACAAGCCGTTCGAGAATTGTTGTccgagcggcggcggcggtgccGGTGCTGGCGTCGGAAGCGTTGGCGGTGTGGGAATCGGCGTCGGTGTCGGGGTCGGGGGTGGTTACGGCTTCGACAATAGCGCGGAAGCGACGAGAAAGATGTACGCGAGCGAGGAGCGCAGAAAGGAGCCGATGAGCAACAATAAGCCCGAAGGAGACGCGCGCGGTGGTCTTAGATGCGATATTTGTAAAATGCGCTTCAAGGACAGGGACACGCTGAATCGGCACACGCTAGTTCACATGAGCGAGGGACCGTACAAGTACGACATATTCTCGGCGACCTTTCGCGACAAGCCCGAAAATAACGCTCGCATGCCGGCCCACGGAGGCATGAAGCAATTCAAATGCACGCTGTGCGAGAGATCTTTCGCTCAGCGCACGGCATTGAACAATCACATGCTCGCTCACAGCGGTGAAAAGCCTCACGCCTGCAACATATGCGAGAAAACGTACAAACGAAAGTCTGAGCTGATAAGACACACGATGGTGCACACGGGCGAACGTCCGTACGAGTGCAAAGAGTGCCTGATGACGTTTCGCGAGAAGGCGAAATTGAACTCGCACATGCTCGTTCACACCGGCGAAAAGCCTCACGAGTGTTATATTTGTCACAAAGCTTgcgcgcgaaaatccgatcTCAACAGTCACATGCTCTCGCACACCGGCGGTCAGTACGATTGCAAAGTCTGCGACAAGATATTCACGCGTAAGTCTGATCTCAACAGGCACACGCTCATACATACCGGCGAAAAGCCGTTCGCTTGCGAACTGTGCGACATGGCTTTTCGCGAGAGAACGCGCCTCAATTCTCACATGCTCGTGCACACCGGCGACAAGCGTCACGCTTGTCACATATGCGGCAAaacttttcgcgaaaaatcgagccTCAAGAAGCACATGCTGATTCACACGGGCGACCGTCCGTACGAGTGTTTCGTTTGCAAGAAAACCTTCACCCAAAAAACTACGTTGAACAGTCACGTACTCGTCCACACCGGTGAACGACCGTACGAGTGCGAAACGTGCCCGAAGGCATTTCGCGAAAGATCGTCGTTGAGAAAACATTCTTTGTTTCACACGACGGAGCGCGGTCACGAGTGCAACgtttgtttcaaaaaatttacccACAAAGCCGATCTCGGCACTCACGCGGCTATCGATCATCCCTCATAG
Protein Sequence: MDALTVCSQVMDENIVSVVLKEEPGDRFAQSYIEDICSGTFGKVFLPIDAHEGDFTDEMVKLELESQSSGHHNWAVQLAAASLCERIEGATQARSQYAGQLGQKSAVDVEEEEEVAEEERRSADKDEEDESSGRQKFYKIQCTICKKWFLNNDSMITHLRSHCGGNVGGGDQCQVCQQSFQDNTSLHAHMLTHVGMNPVECNICQKRFAYKWCLRNHVQTHVAANNKPFENCCPSGGGGAGAGVGSVGGVGIGVGVGVGGGYGFDNSAEATRKMYASEERRKEPMSNNKPEGDARGGLRCDICKMRFKDRDTLNRHTLVHMSEGPYKYDIFSATFRDKPENNARMPAHGGMKQFKCTLCERSFAQRTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCDMAFRERTRLNSHMLVHTGDKRHACHICGKTFREKSSLKKHMLIHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKAFRERSSLRKHSLFHTTERGHECNVCFKKFTHKADLGTHAAIDHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00653024;
90% Identity: iTF_00397502;
80% Identity: -