Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998233.1:7601378-7603643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.03 2.9 9.0 0.5 2 23 152 173 151 173 0.97

2 14 1.1e-05 0.001 19.8 1.4 2 23 184 205 183 205 0.98

3 14 3.6e-05 0.0035 18.2 2.0 2 23 212 233 211 233 0.97

4 14 1.9e-05 0.0018 19.0 1.1 2 23 314 335 313 335 0.96

5 14 3.6e-06 0.00034 21.3 0.5 1 23 369 391 369 391 0.97

6 14 1.1e-06 0.0001 23.0 1.8 1 23 397 419 397 419 0.96

7 14 4.1e-05 0.0039 18.0 0.6 1 23 425 447 425 447 0.98

8 14 4.1e-05 0.0039 18.0 5.3 1 23 453 475 453 475 0.97

9 14 1e-07 1e-05 26.2 1.0 1 23 480 502 480 502 0.97

10 14 0.0013 0.12 13.3 0.2 1 23 508 530 508 530 0.97

11 14 1.3e-07 1.2e-05 25.9 3.9 1 23 536 558 536 558 0.96

12 14 5.4e-06 0.00051 20.8 1.6 1 23 564 586 564 586 0.98

13 14 8.7e-05 0.0083 17.0 1.2 1 23 592 614 592 614 0.94

14 14 0.00079 0.076 13.9 1.2 1 23 620 643 620 643 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.03	2.9	9.0	0.5	2	23	152	173	151	173	0.97
2	14	1.1e-05	0.001	19.8	1.4	2	23	184	205	183	205	0.98
3	14	3.6e-05	0.0035	18.2	2.0	2	23	212	233	211	233	0.97
4	14	1.9e-05	0.0018	19.0	1.1	2	23	314	335	313	335	0.96
5	14	3.6e-06	0.00034	21.3	0.5	1	23	369	391	369	391	0.97
6	14	1.1e-06	0.0001	23.0	1.8	1	23	397	419	397	419	0.96
7	14	4.1e-05	0.0039	18.0	0.6	1	23	425	447	425	447	0.98
8	14	4.1e-05	0.0039	18.0	5.3	1	23	453	475	453	475	0.97
9	14	1e-07	1e-05	26.2	1.0	1	23	480	502	480	502	0.97
10	14	0.0013	0.12	13.3	0.2	1	23	508	530	508	530	0.97
11	14	1.3e-07	1.2e-05	25.9	3.9	1	23	536	558	536	558	0.96
12	14	5.4e-06	0.00051	20.8	1.6	1	23	564	586	564	586	0.98
13	14	8.7e-05	0.0083	17.0	1.2	1	23	592	614	592	614	0.94
14	14	0.00079	0.076	13.9	1.2	1	23	620	643	620	643	0.94

Sequence Information

Coding Sequence: ATGGATGCGCTGACTATAAGCAGTCAGGTTATGGATGAAAACATTGTCAGCGTCGTGCTTAAGGAAGAATCCGGCGACAGATTTGGTCAGTCATACATCGAAGATATCTGCTCCGGTACATTTGGCAAGGTTTTCCTACCGATCGACAGTCACGAAGAGGATTTTACGGATGAAATGGTCAAACTGGAACTAGAGAGTCAATCGAGCGGACATCATAACTGGGCTGCGCAATTAGCCGCGGTGACGTTGTGCGAACGAATCGAAGGTTCAGCGCAAAGGTGTCCGCCGTCTGGCAAGGACTTTGGTCAGTTAGGCGAAAAATCTGCGGACGCAGTGGAGAAGGAGGGCCGAGTCGAGGAGggcgaggaagaggacgaggagggagATCGTCGCGCGTCGGAGGACAGGGACGAGGAGGGAGACTCTCGTAATCAGCCGAAATTCTACAAGATCCAGTGTTCCATCTGCAAGAAGTGGTTCCTCAACAGCGACTCGATGATAACGCATCTGAGAAGCCACTGCGGCAGCAACGTCGCCAGTGGTGTAGATCAGTGCCAAGTATGCCAGCAGAGTTTTCAGGACAATTCGAGCTTGCACGCTCACATGTTGACTCACGTAGGCATGAATCCGGTCGAGTGCAACATTTGCCAGAAGCGTTTCGCATACAAATGGTGCTTGCGTAATCACGTGCAGACTCACGTCGGTGCGGACAAGCCGTTCGACAATTGTTGTCCGAGTGGCGGTGGCGGCAACAGCGGCGTCGGCGCGGGCGTTGGAGGTATCGGCATCGGGGTCGCTGTCGGAGTCGGCGGTGGTTACGACTTCGACAATACGGCGGACGCGACGAGAAAGATGTACCCGAACGATCGCGGGCCgagcgacgaacgacgaaaggACGGTATGAGCGGCAAGGCCGAGGCGGAGGCGAGGGGCGCCCTGAGATGCGACATATGCAAGATGCGTTTCAAGGACAGGGAGACCCTGAACCGGCACACGCTCGTTCATATGAGCGAGGAACCCTACAAGTACGACATATTTTCGGCGACCTTCAGGGACAAGCCCGATGGAAACACACGTATGCCCGCCCACGCCGGTATGAAACAGTTCAAATGCACGCTGTGCGAGAGGTCCTTCGCTCAGAGAACGGCGCTCAACAATCACATGCTGGCCCACAGCGGCGAGAAACCGCACGCCTGCAATATCTGCGAGAAAACATACAAACGCAAGTCCGAACTGATAAGACACACGATGGTTCACACCGGCGAACGACCCTACGAGTGTAAGGAGTGCCTCATGACCTTTCGGGAGAAGGCGAAATTGAATTCTCACATGCTCGTTCACACCGGTGAGAAACCCCACGAGTGTTACATATGCCACAAAGCCTGCGCCCGAAAATCCGACCTCAACAGTCACATGCTTTCGCACACCGGTGGCCAGTACGATTGCAAAGTTTGCGACAAGATATTCACACGAAAATCCGATCTGAACAGGCACACTCTCATACACACAGGCGAAAAGCCGTTCGCCTGCGAACTCTGCGACATGGCCTATCGCGAGAGGACCCGCTTGAACTCGCACATGCTCGTTCACACCGGCGACAAGAGACACGCTTGTCACATATGCGGCAAGACGTTCAGAGAAAAGTCGAGCCTGAAGAAGCACATGCTTGTGCACACGGGCGATCGGCCGTACGAGTGTTTCGTGtgtaaaaaaacttttaccCAGAAAACTACGTTGAACAGTCACGTTCTAGTGCACACGGGTGAGCGTCCCTACGAGTGCGAAACATGCCCGAAGGCATTCAGGGAACGTACGTCGTTGAGAAAACATTCTTTATTTCACACCTCCGACCGGGGACACGAGTGTAACGTTTGTTTGAAAAAGTTTACACACAAAGCCGATCTCGGCACCCACGTGGCGATCGATCATCCCTCATAG
Protein Sequence: MDALTISSQVMDENIVSVVLKEESGDRFGQSYIEDICSGTFGKVFLPIDSHEEDFTDEMVKLELESQSSGHHNWAAQLAAVTLCERIEGSAQRCPPSGKDFGQLGEKSADAVEKEGRVEEGEEEDEEGDRRASEDRDEEGDSRNQPKFYKIQCSICKKWFLNSDSMITHLRSHCGSNVASGVDQCQVCQQSFQDNSSLHAHMLTHVGMNPVECNICQKRFAYKWCLRNHVQTHVGADKPFDNCCPSGGGGNSGVGAGVGGIGIGVAVGVGGGYDFDNTADATRKMYPNDRGPSDERRKDGMSGKAEAEARGALRCDICKMRFKDRETLNRHTLVHMSEEPYKYDIFSATFRDKPDGNTRMPAHAGMKQFKCTLCERSFAQRTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECYICHKACARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACELCDMAYRERTRLNSHMLVHTGDKRHACHICGKTFREKSSLKKHMLVHTGDRPYECFVCKKTFTQKTTLNSHVLVHTGERPYECETCPKAFRERTSLRKHSLFHTSDRGHECNVCLKKFTHKADLGTHVAIDHPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00653024;
90% Identity: iTF_00059609;
80% Identity: -