Egri009939.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759232.1:25410579-25427377[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.093 12 8.0 3.1 1 23 201 224 201 224 0.93 2 31 0.00096 0.12 14.2 0.2 2 19 256 273 255 276 0.93 3 31 1.3e-05 0.0017 20.1 0.9 2 23 321 343 320 343 0.96 4 31 4.7 6.1e+02 2.6 0.3 2 14 360 372 359 380 0.77 5 31 0.00051 0.065 15.1 0.9 1 23 390 413 390 413 0.97 6 31 0.026 3.4 9.7 0.5 1 23 432 454 432 454 0.95 7 31 4e-05 0.0051 18.6 1.8 1 23 492 515 492 515 0.97 8 31 0.0018 0.23 13.4 6.0 2 23 554 576 554 576 0.97 9 31 0.068 8.8 8.4 0.2 1 23 626 651 626 651 0.95 10 31 0.00057 0.074 14.9 0.1 1 23 705 727 705 727 0.97 11 31 0.0072 0.93 11.5 7.2 1 23 738 760 738 760 0.98 12 31 0.017 2.3 10.3 1.3 2 23 772 793 771 793 0.96 13 31 0.0034 0.44 12.5 1.4 1 23 803 825 803 825 0.98 14 31 0.0071 0.91 11.5 6.8 1 23 854 876 854 876 0.96 15 31 0.0017 0.22 13.5 5.5 1 23 887 909 887 909 0.98 16 31 0.00017 0.022 16.6 0.6 1 23 917 939 917 939 0.97 17 31 0.00032 0.041 15.7 0.5 2 23 959 981 958 981 0.97 18 31 1.1 1.4e+02 4.7 0.2 1 23 999 1021 999 1021 0.90 19 31 0.12 15 7.7 3.7 1 23 1028 1050 1028 1050 0.97 20 31 0.0016 0.21 13.5 2.1 2 23 1061 1083 1060 1083 0.94 21 31 0.014 1.8 10.6 0.2 2 23 1106 1127 1105 1127 0.95 22 31 0.0031 0.4 12.7 0.2 3 23 1209 1229 1207 1229 0.92 23 31 2 2.5e+02 3.8 5.0 5 23 1239 1257 1237 1257 0.94 24 31 0.016 2 10.4 0.9 2 23 1268 1290 1267 1290 0.95 25 31 0.0037 0.47 12.4 2.6 2 23 1307 1325 1307 1325 0.96 26 31 0.72 93 5.2 1.9 2 21 1329 1348 1329 1349 0.93 27 31 3.6 4.7e+02 3.0 1.9 2 23 1371 1392 1371 1392 0.93 28 31 0.55 71 5.6 0.6 2 23 1399 1420 1398 1420 0.93 29 31 0.0018 0.23 13.4 1.8 2 23 1431 1453 1430 1453 0.96 30 31 4.2 5.5e+02 2.8 0.3 3 23 1470 1487 1469 1487 0.77 31 31 1.1 1.4e+02 4.7 3.4 2 19 1491 1508 1490 1511 0.92
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCCATCTTTACGGTGGACAATTCGTTGCAGCTGGCGGAGATGGCAATGGATTGTGCCCGAATCAAAATCTATGATGGAGATGGTCTGCCGGATAAAGTTTGCTCAGAGTGTATACAGAAGCTAAGTAGTGCTTACATATTCAAACAACAATGTGAGCGCGCAGACCAGGAGCTGCGACGGAACTATGTGCCACCACCAGGATTCAGTATCAGTCCACCACCACCGAATAGACAGAGCAGTGACTCAGCTTTCTCTAACCACACTGATAGCTCCAACCTCACCAAACCTCCATCTTCCTTCGAAGAAAAGATATCTCCAGCGAGCAGAACCCGAAAACGTAGCATAGAAAGCGAAGGTAACACATCCAGGTCCAGCGACTTTAGACCTACTACCTCAAAACGCGTGGAGCAACTGAGAAAATCTCAGAAAAAGAGACCTCGATTACAATCTGAAAATACTTCTCAACCGGATTCGGATTACGAAGATAACAATAGCGGATCAGGTTTGCCAGAAACCGACTCAGATGAACCGCTCATGAGGAatgcatttaaatgtaaatcaTGTCCGAAACAGTTTCAAACTTACAAAAGCTTATCCCTTCACTCAACTAGAATGCACGGAAAGACTATTGAGAAGACACCCAAAGAGGATGCCGTCATCGAAAAACCAATGGAAGCTAACGAGGATGCTGCAGATGTAGAAGATAAGTTAACATGCGACAAGTGCGATAAAACTTTTAAACTGAAGATCATGCTGAAACGCCATGCCGATGTGTGCGGGAAAACGCCTATCAAATCACCGCAAAAGGAGCTGCTTATATCGTTAGAACCTATAGACGCCAAGCAGAACTTATTTCAACAGAATTTATCGCAACATATTCAGACACAAGAGACCGTTATCACTATTTCCTGTGAACATTGTACTGCTAGGTTCAAGACTCTGGATAACCTAGCTAAACATATGAGGGTGGTGCACGCGGCTGCTTTGAAGAAAGAAACCGAACCGAACAGAAAGGTGCCAGTTCCTTGCCTGTACTGCAACAAAAAGTTCGACGGATATTACGAACACAACGCGCACTTCATGGTGTGTCCGCAGCTAGACGAATCTAAGCCGTATGTGTGCCCTGTGTGTGACAAATTGACATCTAGGAAGACATCTTACTACCAGCACATTAGGAACATGCATTTTGAACCTCGTGGATCGATTGTGGAATCTGAACCTGAAGTACAGCAGGAGTACCACGAATGTCGTGTGTGTTTGAAGAAGTTGGCGTCCCAGGCGCAACTTATCAAACACTTGTCCGCGCACGTGTCCAACATACAAGATGATGGTGCTGCTGACAACGAGTCCAGGGCAAGTATAGATGATGCTGCCTCTGTTCACTCGGCACAAAGCAATACATATCCTGCTAGTGGGAACTTCAGCTGTCCCGTGTGCGATAAAGATTTCAAGTATAGAAAAGCTCTGTTAACACATCAAAAAAAGTTCCACACAGATGTGCCTGCACAGGTTAAAGTTGAACCCCCCGATAAAGCTTCGACAAGTCTATTAAGCGAGAAGCAGTACCGCTCCGATTCCGAATCTAGtcaagaagaagaagacaaCACATGTGATATATGCGAGAAGCACTTCTCGTACAAACGTCTTTTGATCCATCACAAGAGGACGAAACACAACATGAGCTCGGGACACAAACGGGCTAAGATCTACCTTAAGGACTGTTCGGTTCGTTGCCTCATCTGCGACCTGCAAATGAAAGTCGGCGATATAAACGAGCACAATCAGACACATATCGCCAAGGGTATGAGGCCAAGAAACCTATACACCTGTGCGGAGACTGGCTGCGAAGCCACGTTCAAAGCCTGCAGTGCGCTAGCGACCCATATAAAACTAGTGCACAGATTAAAGCAGAAAATTGAAGAGAATACGGTTAATCCGTCGGATTTTTGTGAAGTCGTTGTGGCCAAGTCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGGGAGGTTCCGATAGAGCAGGACGGCAAGCCGCTGGTGGACCTGAGCGGCTTCACGTGCCCCATTTGTGGGAAAAAGATGCCTACGCTAATATCGCTGAAGAGGCACGTGAACTGGCACACTAACGTCGGCAAGAACTTGGAGAAGAAATATGAATGCTTTGTTTGCAAGGAGTCTTTCAGATTCCAATGCCACTACAAGCTACATATGCGTGAGCATTACAGTGACACGAACCTGGACCCGACGCACCTCACGTGTACCATCTGCGGTCGCAGGAGCAAGCACCTTCGCGCCGCGCAGGCGCACATGAATTTCCACAAGCAGACCCGCTTCAAGAACAAAGACTACCAGTGCTCCATCTGCGAGCGAGTGTTCCAGCATAGGAAAGTTTACCTCTCTCACATGGCGATACATTACAAGAAAGGAGATAGCGTTCAAAACACTATAGTAGGCGACGCGTTGCCGAACAACTTTGATAAGAACGCCTACGACGGCTCCCATACTTGCCAGCATTGCGGCAAAGTTTGCGACTCTGAGACTTCTCTGAAACACCATCTCATTTGGCACACGTCTAAGACTTTCTTGTATGCCGACCGACACGAGTGTCACGTTTGCAAAGTGAAATTCACTAATAAGAGACGACTGGAACTCCACCTCAGAACTCATTACGAAGATGATAATGGCCCGTTTAAGTGCACCATCTGCGGCAAAGGATACACAGAGGAAGGTTACTATAGACGGCACGTCAAAGGACACAACTTTGACAACCAATCGCACAAAAAGAGAATAGAGAAGCTCAGAAAAGATAAAGTGAAGTGTCCAATATGTTCGCGGTATTACAAAGACTTGGTCAAACTAATTCGTCACCTTCGACGGACGCACCCCGAGAGCAAGATGATCAAGACCGATCCTGATGCTCCCCCGCAGCCATACTTTTCGTGTAAACTTTGCGCTAAAGTGTTTTTAGATGAACGAAGGCTTCAAGCACACGAAGAAGCACACTTGAGGAAGCCGGAGTTCTTTAAATGCAAGTTCTGTGGCAAGAAGACTATATCTCTGAAAAATCACAGGGTGCATATAAAGGGTCATTTGACGCAAAAGTATATGGACAATCCTTTGAAGTGTCCGCACTGTGAAGAGACGTTCAGGCGAGGCTACGACCTGCATTACCACGTGCGCGACGTCCATGGCATCGAGGAGACGTGGATAGCCGAACGGACGGAAAAGCGCCTTGCCGGGCCCCTTAAGGACTTACAGTGTTCCATTTGTATGAAGGTCCTCGCCAACAAAGGGAACTTCGAGCGACATTTAGACTATCACAACTCCTTGAGGTGCAATTACTGTTTCGATTACTTCAGCTCCCTCAGGTTCCTAGAGGGACATTTAGCATTCTCATGTGACAAAAAGAAACGTTTAGGCGACACTGAGATCTATCCCAAGAAAATTAAATGCCACATTTGTTACAAACCCTTCCACATTCAAGTAAAACTGGACTGCCACCTGCGCACGCAGCACAATGTTAAAGTCCGCAGAGAAGCTTCGTCGGGTAAGAAGGAAATTATCTGCGATTACTGCTTCAAAGTTTTCGAGAATGAGTACGCTCTAACTACTCACAAAGTGTATCATCGCACTGTAGGATTCTTTGGGTGTATTTATTGCAAACGAAAGTTTAACACTATTTCTCTATATCGCAAACACAAGAATCACCACTTTGCACAGCTGAACGTGGACGAGCCCACAAAGTGCGAACATTGCGACGAGACATTCGTAGCGTTTAGAGACATGATTTACCACATGCGCGACGAACACGGAGACGATAAAGACTGGGTCACGTTACCCAAAGAGTCCATTGAGGAGACGTGCAAGATCTGTAACAAGACATTCTACAACTTGCAGAGACATATGATGTATCATGAGGAGAATAGGTGCAAAAAGTGTGGAGAGTATTTCTTCTCAACGGCAGACTTCGATAACCATCTATGCTCAATAGAGAGCGATGACGAGGACACCACCCAGACCGTGAACGGCTTCGAACGTCCGAAGTACGAGGAGTGCAATTTCTGCTTCAAACCAGTTACGAGGCGTAGTTCTAAAGCGATGCACGAACACATTCACAAGGGATCTGGGTCTATATCGTGTAGGTTCTGCTGGCTAAAGTTTAAGACGATGGACGCGTTCAACATCCACGCTTTCTCACACCGAAGCAGAAAGTATAACAAGAAACCCATAAAATGCAAGAAATGCAAAGAGAAGTTTGTGAAATACGGACTTTTTATGAAGCACATGAAACTAGTGCACAAGTCTATTAAAAAGATGCATTACAGGGCGATGGTGAAGCCGGAGCCGTGCGTGGTGTGCGGCGAGGAGTTCCCCAACTTGCACAACCACTACCGCGCCCACCTGCTCAACCAGTGTCAGTCCTGCCACAAGTACTTCACATCCTCCAAACTGTTCGCTATGCACGAATGTGATAAAGAAGACTCCGATCCTTCTAAAGTGTTCACGAGCGATGCCAGATTGAATGACTTAATAAACTCGTATGTCCCTAAGGATTTGAAAGATGATGAGAAATACTATGGTAACAGTGACGACGACGAGGAAGAGGAAGAATTGTCTCAAGTGTGCGGAGAAGAGGAAGTGAGTCAGGATGACAAGGATATGGACTTCAAAGATATGGACatcaaaaatattgatattgacGAAAATAATGATATAACTTTCCAACCGTTGTCTATTCAGTCACCGATCATATCGGATGTGCTGTCGTTGTACCAAAAAGAAATGAATCCTGCAGTCATAGACGACGGTGTTGTAAACTTATCGGATGATGACTCTGATGTGGACCAAGTGGCCCAGAACCATATTGATACTATTGTTATtatcgatgatgatgatgatgattga
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMDCARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSFEEKISPASRTRKRSIESEGNTSRSSDFRPTTSKRVEQLRKSQKKRPRLQSENTSQPDSDYEDNNSGSGLPETDSDEPLMRNAFKCKSCPKQFQTYKSLSLHSTRMHGKTIEKTPKEDAVIEKPMEANEDAADVEDKLTCDKCDKTFKLKIMLKRHADVCGKTPIKSPQKELLISLEPIDAKQNLFQQNLSQHIQTQETVITISCEHCTARFKTLDNLAKHMRVVHAAALKKETEPNRKVPVPCLYCNKKFDGYYEHNAHFMVCPQLDESKPYVCPVCDKLTSRKTSYYQHIRNMHFEPRGSIVESEPEVQQEYHECRVCLKKLASQAQLIKHLSAHVSNIQDDGAADNESRASIDDAASVHSAQSNTYPASGNFSCPVCDKDFKYRKALLTHQKKFHTDVPAQVKVEPPDKASTSLLSEKQYRSDSESSQEEEDNTCDICEKHFSYKRLLIHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKGMRPRNLYTCAETGCEATFKACSALATHIKLVHRLKQKIEENTVNPSDFCEVVVAKSEPLDWIQSHNDFGEVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYSDTNLDPTHLTCTICGRRSKHLRAAQAHMNFHKQTRFKNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDALPNNFDKNAYDGSHTCQHCGKVCDSETSLKHHLIWHTSKTFLYADRHECHVCKVKFTNKRRLELHLRTHYEDDNGPFKCTICGKGYTEEGYYRRHVKGHNFDNQSHKKRIEKLRKDKVKCPICSRYYKDLVKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYMDNPLKCPHCEETFRRGYDLHYHVRDVHGIEETWIAERTEKRLAGPLKDLQCSICMKVLANKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKRLGDTEIYPKKIKCHICYKPFHIQVKLDCHLRTQHNVKVRREASSGKKEIICDYCFKVFENEYALTTHKVYHRTVGFFGCIYCKRKFNTISLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDEHGDDKDWVTLPKESIEETCKICNKTFYNLQRHMMYHEENRCKKCGEYFFSTADFDNHLCSIESDDEDTTQTVNGFERPKYEECNFCFKPVTRRSSKAMHEHIHKGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCKEKFVKYGLFMKHMKLVHKSIKKMHYRAMVKPEPCVVCGEEFPNLHNHYRAHLLNQCQSCHKYFTSSKLFAMHECDKEDSDPSKVFTSDARLNDLINSYVPKDLKDDEKYYGNSDDDEEEEELSQVCGEEEVSQDDKDMDFKDMDIKNIDIDENNDITFQPLSIQSPIISDVLSLYQKEMNPAVIDDGVVNLSDDDSDVDQVAQNHIDTIVIIDDDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502316;
- 90% Identity
- iTF_00405257; iTF_00636747; iTF_00909069; iTF_01166940;
- 80% Identity
- -