Basic Information

Insect: Cybosia mesomella
Gene Symbol: -
Assembly: GCA_946251875.1
Location: CAMIUH010001770.1:103076-114795[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.035 7 9.2 3.1 1 23 204 227 204 227 0.96

2 30 0.0009 0.18 14.3 0.2 2 19 259 276 258 279 0.93

3 30 8.8e-06 0.0017 20.6 0.3 2 23 321 343 320 343 0.96

4 30 10 2e+03 1.5 0.1 2 14 360 372 359 380 0.77

5 30 0.00043 0.085 15.3 1.3 1 23 390 413 390 413 0.97

6 30 0.017 3.3 10.3 0.7 1 23 431 453 431 453 0.95

7 30 1.2e-05 0.0024 20.1 1.5 1 23 491 514 491 514 0.97

8 30 0.0017 0.34 13.4 6.0 2 23 553 575 553 575 0.97

9 30 0.062 12 8.5 0.1 1 23 625 650 625 650 0.95

10 30 0.00054 0.11 15.0 0.1 1 23 704 726 704 726 0.97

11 30 0.0068 1.3 11.5 7.2 1 23 737 759 737 759 0.98

12 30 0.019 3.8 10.1 1.3 2 23 771 792 770 792 0.96

13 30 0.0032 0.63 12.5 1.4 1 23 802 824 802 824 0.98

14 30 0.0075 1.5 11.4 6.7 1 23 853 875 853 875 0.96

15 30 0.0043 0.85 12.1 6.0 1 23 886 908 886 908 0.98

16 30 0.00015 0.031 16.7 0.7 1 23 916 938 916 938 0.97

17 30 0.00054 0.11 15.0 0.6 2 23 958 980 957 980 0.97

18 30 1 2e+02 4.7 0.2 1 23 998 1020 998 1020 0.90

19 30 0.11 22 7.7 3.7 1 23 1027 1049 1027 1049 0.97

20 30 0.0068 1.4 11.5 1.3 2 23 1060 1082 1059 1082 0.94

21 30 0.013 2.6 10.6 0.2 2 23 1105 1126 1104 1126 0.95

22 30 0.0056 1.1 11.8 0.2 2 23 1207 1228 1206 1228 0.92

23 30 0.75 1.5e+02 5.1 5.7 3 23 1236 1256 1234 1256 0.96

24 30 0.015 3 10.4 0.9 2 23 1267 1289 1266 1289 0.95

25 30 0.036 7.2 9.2 4.9 2 23 1306 1324 1306 1324 0.97

26 30 1.3 2.5e+02 4.3 2.0 2 20 1328 1346 1328 1347 0.93

27 30 1.8 3.5e+02 3.9 2.2 2 23 1370 1391 1370 1391 0.95

28 30 0.52 1e+02 5.6 0.6 2 23 1398 1419 1397 1419 0.93

29 30 0.0017 0.33 13.4 1.8 2 23 1430 1452 1429 1452 0.96

30 30 0.8 1.6e+02 5.0 2.8 2 19 1490 1507 1489 1510 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.035	7	9.2	3.1	1	23	204	227	204	227	0.96
2	30	0.0009	0.18	14.3	0.2	2	19	259	276	258	279	0.93
3	30	8.8e-06	0.0017	20.6	0.3	2	23	321	343	320	343	0.96
4	30	10	2e+03	1.5	0.1	2	14	360	372	359	380	0.77
5	30	0.00043	0.085	15.3	1.3	1	23	390	413	390	413	0.97
6	30	0.017	3.3	10.3	0.7	1	23	431	453	431	453	0.95
7	30	1.2e-05	0.0024	20.1	1.5	1	23	491	514	491	514	0.97
8	30	0.0017	0.34	13.4	6.0	2	23	553	575	553	575	0.97
9	30	0.062	12	8.5	0.1	1	23	625	650	625	650	0.95
10	30	0.00054	0.11	15.0	0.1	1	23	704	726	704	726	0.97
11	30	0.0068	1.3	11.5	7.2	1	23	737	759	737	759	0.98
12	30	0.019	3.8	10.1	1.3	2	23	771	792	770	792	0.96
13	30	0.0032	0.63	12.5	1.4	1	23	802	824	802	824	0.98
14	30	0.0075	1.5	11.4	6.7	1	23	853	875	853	875	0.96
15	30	0.0043	0.85	12.1	6.0	1	23	886	908	886	908	0.98
16	30	0.00015	0.031	16.7	0.7	1	23	916	938	916	938	0.97
17	30	0.00054	0.11	15.0	0.6	2	23	958	980	957	980	0.97
18	30	1	2e+02	4.7	0.2	1	23	998	1020	998	1020	0.90
19	30	0.11	22	7.7	3.7	1	23	1027	1049	1027	1049	0.97
20	30	0.0068	1.4	11.5	1.3	2	23	1060	1082	1059	1082	0.94
21	30	0.013	2.6	10.6	0.2	2	23	1105	1126	1104	1126	0.95
22	30	0.0056	1.1	11.8	0.2	2	23	1207	1228	1206	1228	0.92
23	30	0.75	1.5e+02	5.1	5.7	3	23	1236	1256	1234	1256	0.96
24	30	0.015	3	10.4	0.9	2	23	1267	1289	1266	1289	0.95
25	30	0.036	7.2	9.2	4.9	2	23	1306	1324	1306	1324	0.97
26	30	1.3	2.5e+02	4.3	2.0	2	20	1328	1346	1328	1347	0.93
27	30	1.8	3.5e+02	3.9	2.2	2	23	1370	1391	1370	1391	0.95
28	30	0.52	1e+02	5.6	0.6	2	23	1398	1419	1397	1419	0.93
29	30	0.0017	0.33	13.4	1.8	2	23	1430	1452	1429	1452	0.96
30	30	0.8	1.6e+02	5.0	2.8	2	19	1490	1507	1489	1510	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGTAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCCATCTTTACGGTGGACAATTCCTTGCAGCTGGCAGAGATGGCAATGGATTGTGCCCGAATTAAAATTTATGATGGAGATGGTCTACCGGATAAAGTTTGCTCAGAGTGTATACAGAAGCTAAGCAGTGCTTACATATTCAAACAACAATGTGAACGCGCAGACCAGGAGCTGCGGCGGAAttatgtgccaccaccagGGTTCAGTATCAGCCCTCCGCCACCGAATAGACAGAGCAGTGACTCAGCTTTCTCTAACCACACTGATAGCTCGAACCTCACCAAACCTCCATCTTCCTTTGAAGAAAAGGTATCTCCAGCAACCAGAACCCGAAAACGGAGTATAGAAAGCGAAGGTAACACTTCAACGGGAGGCCGGTCCAGCGATTTTAGACCTACCAGCTCAAAACGTGTTGAAGAGCTGAGACAATCTCAGAAAAAGAGACCTCGTTTACAATCTGAAAATACTTCACAACAGGATTCAGATTACGAAGATAACAATAGCGGCTCAGGCTTGCATGAAACCGACTCAGATGAACCACTCATGAAGAATGCATTCAAATGTAAATCATGTTCGAAACAGTTTCAAACTTACAAAAGCTTGGCCATCCACACAACTAGAATGCACGGCAAAATTCTTGAGAAGACACTCGCAGAGGACGTAGTCGTCGACATACCAAAGAAAGCTACTGAGGATGCTGCAGATGTAGAAGATAAGTTAACCTGCGACAAGTGCGACAAAACTTTCAAATTGAAGATCATGCTGAAACGACACGCCGATGTGTGCGGCAAAACGCCTATCAAGTCACCGCAAAAGGAGTTGCTCATATCCTTAGAACCTATAGACGCCAAGCAAAAAGTATCTCAACAGAAACAATCGCCACAGAATCAGACAGCTGTTACTATTTCGTGCGAATATTGCACTGCTAGGTTCAAAACTCTTGATAACTTAGCGAAACATATGAGGGTGGTTCACGCGGCTGCTTTGAAGAGAGAAACCGAACCAAACAGAAAGGTGCCAGTTCCTTGCCTGTACTGCAACAGAATGTTCGATGGATATTATGAACATAACGCGCACTTCATGGTATGTCCAAAACTAGACGAATCTAAGCCGTTCGTGTGCCCTATATGTAACAAAACGATGTCTAGAAAGACGTCGTACTACCAGCACATTAGGAATATGCATTTTGAACCTCGTGGGTCAAATGTGGAATCTGAGCCTGAAATACAGGAGTATCATGAATGTCGGGTCTGTTTGAAAAAGCTGGCAACCCAGGAGCAGCTTATCAAACACTTGTCTGCGCATGTTTCCAACATCCAGGATGAGGGAGCTGCTGACAACGAATCCAGGGCAAGTATGGATGATGCTGCCTCTGTTCACTCTGTACAAAGCAATACGTATCCTGCCAGTGGCAATTACAGCTGTCCCGTGTGTGATAAAGAGTTTAAGTATAAGAAAGCTCTGTTAACACATCAACAAAAGTTCCATACAGAAGTTCCTGTACAAGTTAAAGTGGAACCACCCGACAAAGCTTCGACAAGTCTCTTAAGCGAAAAGCAGTACCGCTCTGATTCTGAATCTAgtcaagaagaagaagacaacACATGCGATATATGCGAGAAGCACTTCTCGTACAAACGTCTTTTGATTCATCACAAACGGACGAAACACAACATGAGCTCGGGGCACAAACGCGCCAAGATCTACCTCAAGGACTGTTCGGTTCGCTGCCTCATCTGCGACCTGCAAATGAAAGTCGGTGATATAAACGAGCACAATCAGAAACATATTGCCAAGAATATGAAACCAAGAAACTTATATACCTGCGCGGAGGCTGGCTGCGAAGCCACATTTAAAGCCTGCAGTGCACTCGCAACCCATATAAAACTAGTGCACAGATTAAAGCAGAAAATTGAAGAGAATACGGTTAATCCGTCGGATTTTTGTGAAGTCGTTGTGACCAAGTCGGAACCCCTGGACTGGAGCCAGAGTCACAACGACTTTGGAGAGGTTCCGATTGAGCAGGATGGCAAGCCGCTGGTAGATCTGAGCGGCTTCACGTGTCCCATATGTGGGAAGAAGATGCCTACGCTGATATCGCTGAAGAGGCACGTGAACTGGCACACTAATGTCGGCAAGAACTTAGAGAAGAAATACGAATGCTTTGTTTGCAAGGAGTCTTTCAGATTCCAATGCCATTACAAACTGCATATGCGTGAGCATTACAAAGACATGAACCTGGATCCTACGCACCTCACGTGCACCATCTGTGGTCGCAAGAGCAAGCACCTGCGTGCCGCTCAGGCGCACATGAACTTCCACAAACAAACCCGCTTCAAGAACAAAGACTACCAGTGTTCCATCTGCGAAAGAGTATTCCAACATAGGAAAGTGTATCTCTCTCACATGGCCATACATTACAAGAAAGGAGATAGCGTTCAAAACACTATAGTAGGCGACGCGTTGCCCAGCAATTTTGATAAGAAAGCTTTTGACGGCACCCACACTTGCCAGCACTGTGGCAAAGTTTGCGACTCTGAGAACTCTCTAAAACATCATCTCATTTGGCACACGTCTAAAACGTTCCTCTATGGCGACCGACACGAATGCCACGTTTGCAAAGTGAAGTTCACCAACAAAAGACGACTGGAACTCCACACCAGAACTCATTTCGAAGATGACAATGGCCCTTTCAAGTGCACTATCTGTGGTAAAGGATACACAGAAGAAGGTTACTTTAGAAAGCACGTCAAAGGTCACAACTTTGATCACCATTCACATCAAAAGAGGATAGAGAACATCAGGAAAGATAAAGTGAAGTGTCCAATATGTTCACGGTATTACAAAGACTTGATCAAGCTAATTCGACATCTTCGACGGACACACCCTGAGAGCAAAATGATCAAAACCGATCCTGATGCTCCTCCACAGCCATACTTTTCATGTAAACTATGCGCTAAAGTGTTTCTGGATGAACGAAGGCTTCAAGCGCACGAAGAAGCTCACTTGAGGAAGCCAGAATTCTTTAAATGCAAGTTCTGTGGCAAGAAGACTATATCACTGAAAAATCACAGGGTGCATATAAAAGGTCATTTGACGCAAAAATATTTGGACAATCCCTTGAAATGTCCACACTGTGAAGAGACGTTCGGGCGAGGTTACGACCTGCACTACCACGTGCGAGACGTTCATGGTATCGAGGAGACGTGGATCGCCGAACGGACGGAAAAACGCCTCGCCGGCCCGCTGAAGGACCTGCAGTGTTCAATTTGTATGAAGGTCCTTGCTAACAAAGGGAACTTCGAGCGACATTTAGACTACCACAATTCCCTGAGGTGCAACTACTGTTTCGATTACTTCAGCTCCCTCAGGTTCCTCGAGGGACATTTAGCATTCTCATGTGAGAAAAAGAAACGTTTAGGTGACACTGAGATTTATcccaagaaaataaaatgtcacaTCTGTTACAAACCCTTCCACATTCAAGTAAAGCTGGACTGCCATCTCCGCACGCAGCATGATATTAAAGTTCGCAGAGAAGCTTCGTCGGGTAAGAAGGAAATTGTCTGCGATTATTGTTTTAAAGTATTCGAAAATGAGTACGCTCTATCTACTCACAAAGTTTACCATCGCACTATTGGATACTTTGGATGTATGTACTGCAAACGAAAGTTTAACACGATGACTCTATATCGCAAACACAAGAATCACCACTTCGCACAGCTGAATGTGGACGAGCCAACAAAGTGCGAACATTGTGATGAGACCTTCGTAGCATTTAGAGATATGATTTACCACATGCGAGATGACCATGGAGATGATAAAGACTGGGTGACGCTGCCCAAGGAGTCTATAGAGGAGCAGTGTAAGATCTGTAACAAAACATTCTATAACTTACACAGGCATATGATGTACCATGAGGAGAACAGGTGTAAAAAGTGCGGGGAGTATTTCTTCTCAACGGCAGACTTCGATAACCATCTATGCCCCATAGAGAGTGACGACGAGGACACCACCCACACTGTCAATGGCTTCGAACGTCCGAAGTATGAGGAATGCAACTTTTGCTTCAAACCAATTACCAGGCAAAGTTCTAAAGCAAAGCACGAACACATACACAAGGGATCTGGTTCCATATCGTGTAGGTTCTGCTGGCTGAAGTTCAAGACGATGGACGCGTTCAACATCCACGCGTTCTCCCACCGAAGCAGAAAGTATAACAAAAAACCCATAAAGTGCAAGAAATGCAAAGAGAAGTTTGTAAAGTATGGGCTTTTTATGAAGCACATGAAACTAGTGCACAAGTCTATAAAAAAGATGCATTATAGAGCGATGGTGAAGCCGGAGCCATGCGTGGTGTGCGGCGACGAATTCCCGAACTTACACAACCACTACCGCGCCCATCTGCTCAACCAGTGTCAGTCCTGCAACAAATACTTTACCTCCTCCAAACTGTTTTCTATGCACGAATGTGATAAAGAAGACTCCGATCCTTCTAAAGTGTTCACGAGTGATGCCAGATTGAACGACTTGATTAACTCGTATGTCCCTAAGGATTTGAAGGATGACGAGAAATATTACGGTAACAGTGACGATGAAGAAGACGAAGAAGATGAGTTGTCGCAAGTTGTTGGAGAAGATGAAGAGAGTCAGGATGACAAAGATAcggatataaaaaatattgatatcgacgaaaataatattactttcCAACCGTTATCTATTCAGTCGCCGATCATATCAGATGTGTTATCACTATACCAAAAAGAAATGAATCCCGCTGTTGTAGATGATGGTGTTGTAAACTTATCGGATGATGATTCAGACGTGGACCACGTGGCCCAGAACCATACTGATACTATTGTTATTatcgatgatgatgattga
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMDCARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSFEEKVSPATRTRKRSIESEGNTSTGGRSSDFRPTSSKRVEELRQSQKKRPRLQSENTSQQDSDYEDNNSGSGLHETDSDEPLMKNAFKCKSCSKQFQTYKSLAIHTTRMHGKILEKTLAEDVVVDIPKKATEDAADVEDKLTCDKCDKTFKLKIMLKRHADVCGKTPIKSPQKELLISLEPIDAKQKVSQQKQSPQNQTAVTISCEYCTARFKTLDNLAKHMRVVHAAALKRETEPNRKVPVPCLYCNRMFDGYYEHNAHFMVCPKLDESKPFVCPICNKTMSRKTSYYQHIRNMHFEPRGSNVESEPEIQEYHECRVCLKKLATQEQLIKHLSAHVSNIQDEGAADNESRASMDDAASVHSVQSNTYPASGNYSCPVCDKEFKYKKALLTHQQKFHTEVPVQVKVEPPDKASTSLLSEKQYRSDSESSQEEEDNTCDICEKHFSYKRLLIHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQKHIAKNMKPRNLYTCAEAGCEATFKACSALATHIKLVHRLKQKIEENTVNPSDFCEVVVTKSEPLDWSQSHNDFGEVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYKDMNLDPTHLTCTICGRKSKHLRAAQAHMNFHKQTRFKNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDALPSNFDKKAFDGTHTCQHCGKVCDSENSLKHHLIWHTSKTFLYGDRHECHVCKVKFTNKRRLELHTRTHFEDDNGPFKCTICGKGYTEEGYFRKHVKGHNFDHHSHQKRIENIRKDKVKCPICSRYYKDLIKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYLDNPLKCPHCEETFGRGYDLHYHVRDVHGIEETWIAERTEKRLAGPLKDLQCSICMKVLANKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKRLGDTEIYPKKIKCHICYKPFHIQVKLDCHLRTQHDIKVRREASSGKKEIVCDYCFKVFENEYALSTHKVYHRTIGYFGCMYCKRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDDHGDDKDWVTLPKESIEEQCKICNKTFYNLHRHMMYHEENRCKKCGEYFFSTADFDNHLCPIESDDEDTTHTVNGFERPKYEECNFCFKPITRQSSKAKHEHIHKGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCKEKFVKYGLFMKHMKLVHKSIKKMHYRAMVKPEPCVVCGDEFPNLHNHYRAHLLNQCQSCNKYFTSSKLFSMHECDKEDSDPSKVFTSDARLNDLINSYVPKDLKDDEKYYGNSDDEEDEEDELSQVVGEDEESQDDKDTDIKNIDIDENNITFQPLSIQSPIISDVLSLYQKEMNPAVVDDGVVNLSDDDSDVDHVAQNHTDTIVIIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_00637963;
80% Identity: -