Ecan010952.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eilema caniola
Gene Symbol
-
Assembly
GCA_949126895.1
Location
OX421462.1:5829659-5840830[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.029 4.5 9.6 2.1 1 23 204 227 204 227 0.93
2 30 0.0013 0.21 13.8 0.4 2 19 259 276 258 279 0.94
3 30 9.5e-06 0.0015 20.6 0.3 2 23 319 341 318 341 0.96
4 30 4.8 7.5e+02 2.6 0.3 2 14 358 370 357 378 0.77
5 30 5.3e-05 0.0084 18.2 0.9 1 23 388 411 388 411 0.97
6 30 0.025 3.9 9.8 0.6 1 23 429 451 429 451 0.95
7 30 3.8e-05 0.0059 18.7 1.8 1 23 490 513 490 513 0.97
8 30 0.0018 0.29 13.4 6.0 2 23 552 574 552 574 0.97
9 30 0.018 2.8 10.3 0.2 1 23 624 649 624 649 0.95
10 30 0.00058 0.091 15.0 0.1 1 23 703 725 703 725 0.97
11 30 0.0073 1.1 11.5 7.2 1 23 736 758 736 758 0.98
12 30 0.021 3.3 10.1 1.3 2 23 770 791 769 791 0.96
13 30 0.0034 0.54 12.5 1.4 1 23 801 823 801 823 0.98
14 30 0.0081 1.3 11.4 6.7 1 23 852 874 852 874 0.96
15 30 0.00011 0.017 17.2 2.3 1 23 885 907 885 907 0.98
16 30 0.00012 0.019 17.1 0.6 1 23 915 937 915 937 0.97
17 30 0.00033 0.051 15.8 0.5 2 23 957 979 956 979 0.97
18 30 1.1 1.7e+02 4.7 0.2 1 23 997 1019 997 1019 0.90
19 30 0.12 19 7.7 3.7 1 23 1026 1048 1026 1048 0.97
20 30 0.0017 0.26 13.5 2.1 2 23 1059 1081 1058 1081 0.94
21 30 0.019 3 10.2 0.2 2 23 1104 1125 1103 1125 0.95
22 30 0.0031 0.49 12.7 0.2 3 23 1207 1227 1205 1227 0.92
23 30 8.4 1.3e+03 1.9 5.1 5 23 1237 1255 1235 1255 0.94
24 30 0.016 2.5 10.4 0.9 2 23 1266 1288 1265 1288 0.95
25 30 0.0037 0.59 12.4 2.6 2 23 1305 1323 1305 1323 0.96
26 30 2.4 3.8e+02 3.6 2.8 2 20 1327 1345 1327 1346 0.93
27 30 3.7 5.8e+02 3.0 1.9 2 23 1369 1390 1369 1390 0.93
28 30 0.56 87 5.6 0.6 2 23 1397 1418 1396 1418 0.93
29 30 0.0015 0.24 13.7 1.4 2 23 1429 1451 1428 1451 0.96
30 30 2.2 3.5e+02 3.7 2.1 2 19 1489 1506 1488 1509 0.92

Sequence Information

Coding Sequence
ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCCATCTTTACGGTGGACAATTCATTGCAACTGGCGGAGATGGCAATGGATTGTGCCCGAATCAAAATCTACGACGGAGATGGTCTGCCGGATAAAGTTTGCTCAGAGTGCATTCAGAAGCTAAGTAGTGCTTACATATTCAAACAGCAATGTGAGCGCGCAGACCAGGAGCTGCGACGGAATTATGTGCCACCACCAGGATTCAGTATCAGTCCTCCGccaccgaatagacaaagcagTGACTCAGCTTTCTCAAACCACACTGATAGCTCGAACCTCACCAAACCTCCATCTTCCATCGAAGAAAAGATATCTCCAGCGAGCAGAAACAGAAAACGTAGCATAGAAAGCGAGGGAAACACTTCAACGGGAGGTCGATCCAGCGATTTTAGACCTACCACCTCAAAACGTGTTGAAGAACTGAGAAAAACTCAGCAAAAGAGACCTCGTTTACAATCTGAAAATACTTCCCAACCAGATTCGGATTACGAAGACAACAATAGTGGGTCAGGCTTGCCTGAAACTGACTCAGATGAACCTCTCATGAGGAATTCATTCAAATGTAAATCATGTCCGAAACAGTTCCAAACTTACAAAAGCTTGGCTATTCACTCGACTAGAATGCACGGAAAAACTATTGAGAAGGCACCCGAAGAGGATGCCGTCAACGAAACACCAAAGGAGCCTAATGAGGATGCTGCAGACGTAGAAGATAAGTTAACATGCGACAAGTGCGATAAAACTTTCAAACTGAAGATCATGCTGAAACGTCACTCCGATGTGTGCGGAAAAATGCCTATTAAGTCACCGCAAAAGGAGCTGCTCATATCATTAGAACCAATAGACGCCAAGCAGACCTTATCTCAACAAAATCAGCCACAACAGACCGTTATCACTATTTCATGTGAATATTGTACTGCTAGGTTCAAAACCCTGGATAACCTAGCGAAACATATGAGGGTGGTGCACGCGGCTGCTTTGAAGAGAGAAACCGAACCGAACAGAAAGGTGCCAGTTCCATGCCTGTACTGCAACAAAAAGTTCGACGGATATTACGAACACAACGCGCACTTCATGGTGTGTCCGAAACTAGACGAATCCAAGCCGTACGTGTGCCCTGTATGTGACAAAATGACATCTAGGAAGACCTCCTACTACCAGCACATTAGGAACATGCACTTTGAGCCTCGTGGGTCGATGGTGGAAGAGCCTGAAATACAGCAAGAGTACCATGAATGTCGTGTGTGTTTGAAAAAGCTGGCGTCTCAGGAGCAGCTTATCAAACACTTGTCTGCGCACGTGTCCAACATCCAGGATGGTGATGGTGCTGCTGACAACGATTCCAGGGCAAGTATGGATGATGCTGCATCAGTTTACTCGGCACAAAGCAACACATATCCCGCTAGTGGCAACTTCAACTGTCCTGTGTGCGATAAAGAATTCAAGTATAGGAAAGCTCTGTTAACACATCAAAAAAAGTTCCACACAGATGTGCCTGTGCAGGTTAAAGTCGAACCACCCGATAAAGCCTCGACAAGTCTTTTAAGCGAAAAGCAGTATCGCTCTGAATCTGAATCTAGTCAAGAGGAAGAAGACAACACCTGCGATATATGCGAGAAGCATTTCTCGTACAAACGTCTTTTGATCCACCACAAGAGGACGAAACACAACATGAGCTCGGGACACAAGCGGGCTAAGATCTACCTCAAGGATTGTTCGGTTCGCTGCCTTATCTGCGACCTGCAAATGAAAGTCGGCGATATAAACGAGCACAATCAGACACATATCGCCAAGGGCATGAAGCCAAGGAACCTATACACCTGTGCAGAAGCTGGCTGCGAAACCACGTTCAAAGCCTGCAGTGCACTTGCAAACCATATTAAACTAGTGCACAGATTAAAACAGAAAATTGAAGAGAACACGGTTAATCCGTCGGATTTTTGTGAAGTCGTTGTGACCAAGTCGGAACCCCTGGACTGGAGCCAGAGTCACAACGACTTTGGGGAGGTTCCGATAGAGCAGGACGGCAAGCCGGTGGTGGATCTGAGCGGCTTCACGTGCCCCATTTGTGGGAAGAAGATGCCTACGCTGATATCGCTGAAGAGGCACGTGAACTGGCACACTAACGTCGGCAAGAACTTGGAGAAAAAATATGAATGCTTCGTTTGCAAGGAGTCTTTCAGATTCCAATGCCACTACAAGCTACACATGCGCGAGCATTACCAGGACACGAACCTGGACCCGACGCTCCTCACGTGTACCATATGCGGTCGCAAGAGCAAGCACCTTCGGGCCGCGCAGGCGCACATGAACTTCCACAAACAGACCCGCTTCAAGAACAAGGACTACCAGTGCTCCATCTGCGAACGAGTGTTCCAGCACAGGAAAGTGTACCTCTCTCACATGGCCATACATTACAAGAAAGGAGATAGCGTTCAGAACACTATAGTAGGCGACGCGCTACCCAACAACTTCGATAAGAAAGCCTTCGACGGCTCCCACACTTGCCAGCACTGCGGCAAAGTTTGTGACTCTGAGAACTCTCTAAAACACCATCTCATTTGGCACACGTCTAAGACTTTCCTCTACGCCGACCGACACGAGTGCCCAGTTTGCAAAATAAAGTTCACCAACAAAAGACGACTGGAACTCCACCTCAGAACTCACTACGAAGATGACAATGGCCCGTTTAAGTGCACCATCTGCGGTAAAGGGTACACAGAGGAAGGCTACTTTAGGCGGCACGTCAAAGGACACAACTTTGACCACCAATCGCACAAAAAGAGGATCGAGAAGCTCAGAAAAGATAAAGTGAAGTGTCCAATATGTTCGCGGTATTATAAAGACTTGGTCAAACTGATTCGTCACCTTCGACGGACGCACCCCGAGAGCAAGATGATCAAGACCGACCCCGATGCTCCTCCGCAGCCGTACTTTTCATGTAAACTTTGCGCTAAAGTGTTCCTAGATGAACGAAGGCTTCAAGCGCACGAGGAAGCTCACTTGAGGAAGCCGGAGTTCTTTAAATGCAAGTTCTGTGGAAAGAAGACTATATCCCTGAAAAATCATAGGGTTCATATAAAGGGTCATTTGACGCAAAAGTATATGGACGATCCCTTAAAGTGTCCGCACTGTGAGGAGACGTTCAGGCGAGGCTACGACCTGCACTATCACGTGCGGGACGTGCATGGCATCGAGGAGACGTGGATAGCTGAGCGGACAGAGAAGCACCTCGCCGGCCCGCTTAAGGACCTGCAGTGTTCcatttgtatgaaagtcctcGCCAGCAAAGGAAACTTTGAGCGGCATTTGGACTACCACAACTCCCTGAGGTGCAACTACTGTTTCGATTACTTTAGCTCCCTCAGGTTCCTAGAGGGACATCTAGCATTCTCATGTGACAAAAAGAAACGTTTAGGCGACACTGAGATTTACCCCAAGAAAATTAAATGCCACATCTGTTACAAACCCTTCCACATTCAAGTGAAGCTCGACTGCCACCTCCGTACGCAGCACAATATTAAAGTTAGCAGAGAAGCTTCGTCGGgtaagaaagaaataatctGCGATTATTGCTTCAAAGTCTTCGAGAATGAGTACGCTTTAACCACTCACAAAGTGTATCATCGCACTGTAGGATACTTCGGGTGTATTTATTGCAAACGTAAGTTTAACACTATTACTCTGTATCGTAAACACAAGAATCACCACTTTGCACAACTGAATGTGGACGAACCAACGAAGTGCGAACACTGTGATGAGACGTTCGTAGCATTTAGAGACATGATCTACCATATGCGCGATGAGCACGGTGACGATAAAGACTGGATAACGCTGCCCAAGGAGTCTATAGAGGAGACATGCAAGATCTGTAACAAGACATTCTACAACTTGCAGAGACATATGATGTACCATGAGGAGAACAGGTGCAAAAAGTGCGGGGAGTATTTCTTCTCTACGACAGACTTCGATAATCATCTGTGCCCAATAGAGAGCGACGACGACGACAGCACTCAGACTGTGAACGGCTTCGAGCGTCCGAAGTATGAGGAGTGCAACTTCTGCTTCAAACCAGTTACCAGACGAAGTTCTAAAGCGATGCACGAGCACATACACAAGGGCTCTGGCTCTATATCGTGTAGGTTCTGCTGGCTGAAGTTCAAAACCATGGACGCGTTCAACATCCACGCTTTCTCACACCGAAGCAGAAAGTATAACAAAAAACCAATAAAATGCAAGAAATGTAAAGAGAAGTTTGTGAAGTATGGGCTTTTTATAAAGCACATGAAACTAGTGCACAAGTCTATAAAGAAGATGCATTACAGGGCGATGGTGAAGCCGGAGCCGTGCGTGGTGTGCGGTGACGAGTTCCCAAACTTGCATAACCACTACCGCGCCCACCTGCTCAATCAGTGTCAATCCTGCCGCAAATATTTCACATCCTCCAGACTGTTCGCTATGCACGAATGTGATAAAGAAGACTCGGATCCTTCTAAAGTGTTCACAAGCGATGCCAGATTGAACGACTTGATCAACTCGTATGTCCCTAAGGATCTGAAAGATGATGAGAAGTATTATGGTAACAGTGATGACGATGAAGAAGAGTTGTCTCAAGTGTGCGGAGAGGATGAAGAGAGTCAGGATGACAAGGATATGGACTTTAAAGATATGGACatcaaaaatattgatattgacGAAAATAATGATATAACTTTCCAACCGCTGTCTATTCAGTCACCGATCATATCGGATGTGTTGTCTTTGTACCAAAAAGAAATGAACCCTGCAGTCGTTGATGATGTTGTGAACTTATCGGATGATGACTCCGATGTGGACCACGTGGCCCAGAATCATACTGATACTATTGTtattattgatgatgatgatgattga
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMDCARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSIEEKISPASRNRKRSIESEGNTSTGGRSSDFRPTTSKRVEELRKTQQKRPRLQSENTSQPDSDYEDNNSGSGLPETDSDEPLMRNSFKCKSCPKQFQTYKSLAIHSTRMHGKTIEKAPEEDAVNETPKEPNEDAADVEDKLTCDKCDKTFKLKIMLKRHSDVCGKMPIKSPQKELLISLEPIDAKQTLSQQNQPQQTVITISCEYCTARFKTLDNLAKHMRVVHAAALKRETEPNRKVPVPCLYCNKKFDGYYEHNAHFMVCPKLDESKPYVCPVCDKMTSRKTSYYQHIRNMHFEPRGSMVEEPEIQQEYHECRVCLKKLASQEQLIKHLSAHVSNIQDGDGAADNDSRASMDDAASVYSAQSNTYPASGNFNCPVCDKEFKYRKALLTHQKKFHTDVPVQVKVEPPDKASTSLLSEKQYRSESESSQEEEDNTCDICEKHFSYKRLLIHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHIAKGMKPRNLYTCAEAGCETTFKACSALANHIKLVHRLKQKIEENTVNPSDFCEVVVTKSEPLDWSQSHNDFGEVPIEQDGKPVVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYQDTNLDPTLLTCTICGRKSKHLRAAQAHMNFHKQTRFKNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDALPNNFDKKAFDGSHTCQHCGKVCDSENSLKHHLIWHTSKTFLYADRHECPVCKIKFTNKRRLELHLRTHYEDDNGPFKCTICGKGYTEEGYFRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICSRYYKDLVKLIRHLRRTHPESKMIKTDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYMDDPLKCPHCEETFRRGYDLHYHVRDVHGIEETWIAERTEKHLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKRLGDTEIYPKKIKCHICYKPFHIQVKLDCHLRTQHNIKVSREASSGKKEIICDYCFKVFENEYALTTHKVYHRTVGYFGCIYCKRKFNTITLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDEHGDDKDWITLPKESIEETCKICNKTFYNLQRHMMYHEENRCKKCGEYFFSTTDFDNHLCPIESDDDDSTQTVNGFERPKYEECNFCFKPVTRRSSKAMHEHIHKGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCKEKFVKYGLFIKHMKLVHKSIKKMHYRAMVKPEPCVVCGDEFPNLHNHYRAHLLNQCQSCRKYFTSSRLFAMHECDKEDSDPSKVFTSDARLNDLINSYVPKDLKDDEKYYGNSDDDEEELSQVCGEDEESQDDKDMDFKDMDIKNIDIDENNDITFQPLSIQSPIISDVLSLYQKEMNPAVVDDVVNLSDDDSDVDHVAQNHTDTIVIIDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01502316;
90% Identity
iTF_00637963;
80% Identity
-