Basic Information

Insect: Lithosia quadra
Gene Symbol: -
Assembly: GCA_963576445.1
Location: OY754876.1:15887786-15895849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.064 4.3 8.5 3.4 1 23 204 227 204 227 0.95

2 30 0.00094 0.063 14.2 0.2 2 19 259 276 258 279 0.93

3 30 9.2e-06 0.00061 20.6 0.3 2 23 324 346 323 346 0.96

4 30 4.4 3e+02 2.7 0.2 2 14 363 375 362 383 0.77

5 30 7e-05 0.0047 17.8 1.5 1 23 393 416 393 416 0.97

6 30 0.017 1.2 10.3 0.7 1 23 434 456 434 456 0.95

7 30 4e-05 0.0026 18.6 2.0 1 23 494 517 494 517 0.97

8 30 0.0042 0.28 12.2 6.1 2 23 556 578 556 578 0.97

9 30 0.009 0.6 11.2 0.1 1 23 628 653 628 653 0.95

10 30 0.00056 0.038 15.0 0.1 1 23 707 729 707 729 0.97

11 30 0.054 3.6 8.7 9.0 1 23 740 762 740 762 0.97

12 30 0.0098 0.66 11.0 1.2 2 23 774 795 773 795 0.96

13 30 0.0033 0.22 12.5 1.4 1 23 805 827 805 827 0.98

14 30 0.0069 0.46 11.5 6.8 1 23 856 878 856 878 0.96

15 30 0.0025 0.17 12.9 6.1 1 23 889 911 889 911 0.98

16 30 4.8e-05 0.0032 18.3 1.1 1 23 919 941 919 941 0.97

17 30 0.00031 0.021 15.7 0.5 2 23 961 983 960 983 0.97

18 30 1 70 4.7 0.2 1 23 1001 1023 1001 1023 0.90

19 30 0.12 7.8 7.7 3.7 1 23 1030 1052 1030 1052 0.97

20 30 0.0015 0.097 13.7 1.9 2 23 1063 1085 1062 1085 0.94

21 30 0.018 1.2 10.2 0.2 2 23 1108 1129 1107 1129 0.95

22 30 0.0033 0.22 12.5 0.2 2 23 1210 1231 1209 1231 0.94

23 30 0.67 45 5.3 5.5 3 23 1239 1259 1237 1259 0.96

24 30 0.016 1 10.4 0.9 2 23 1270 1292 1269 1292 0.95

25 30 0.029 2 9.6 3.6 3 23 1310 1327 1309 1327 0.96

26 30 1.3 88 4.3 2.0 2 20 1331 1349 1331 1350 0.93

27 30 2.2 1.5e+02 3.7 2.6 2 23 1373 1394 1373 1394 0.95

28 30 0.54 36 5.6 0.6 2 23 1401 1422 1400 1422 0.93

29 30 0.0017 0.12 13.4 1.8 2 23 1433 1455 1432 1455 0.96

30 30 0.57 39 5.5 1.8 2 19 1493 1510 1492 1513 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.064	4.3	8.5	3.4	1	23	204	227	204	227	0.95
2	30	0.00094	0.063	14.2	0.2	2	19	259	276	258	279	0.93
3	30	9.2e-06	0.00061	20.6	0.3	2	23	324	346	323	346	0.96
4	30	4.4	3e+02	2.7	0.2	2	14	363	375	362	383	0.77
5	30	7e-05	0.0047	17.8	1.5	1	23	393	416	393	416	0.97
6	30	0.017	1.2	10.3	0.7	1	23	434	456	434	456	0.95
7	30	4e-05	0.0026	18.6	2.0	1	23	494	517	494	517	0.97
8	30	0.0042	0.28	12.2	6.1	2	23	556	578	556	578	0.97
9	30	0.009	0.6	11.2	0.1	1	23	628	653	628	653	0.95
10	30	0.00056	0.038	15.0	0.1	1	23	707	729	707	729	0.97
11	30	0.054	3.6	8.7	9.0	1	23	740	762	740	762	0.97
12	30	0.0098	0.66	11.0	1.2	2	23	774	795	773	795	0.96
13	30	0.0033	0.22	12.5	1.4	1	23	805	827	805	827	0.98
14	30	0.0069	0.46	11.5	6.8	1	23	856	878	856	878	0.96
15	30	0.0025	0.17	12.9	6.1	1	23	889	911	889	911	0.98
16	30	4.8e-05	0.0032	18.3	1.1	1	23	919	941	919	941	0.97
17	30	0.00031	0.021	15.7	0.5	2	23	961	983	960	983	0.97
18	30	1	70	4.7	0.2	1	23	1001	1023	1001	1023	0.90
19	30	0.12	7.8	7.7	3.7	1	23	1030	1052	1030	1052	0.97
20	30	0.0015	0.097	13.7	1.9	2	23	1063	1085	1062	1085	0.94
21	30	0.018	1.2	10.2	0.2	2	23	1108	1129	1107	1129	0.95
22	30	0.0033	0.22	12.5	0.2	2	23	1210	1231	1209	1231	0.94
23	30	0.67	45	5.3	5.5	3	23	1239	1259	1237	1259	0.96
24	30	0.016	1	10.4	0.9	2	23	1270	1292	1269	1292	0.95
25	30	0.029	2	9.6	3.6	3	23	1310	1327	1309	1327	0.96
26	30	1.3	88	4.3	2.0	2	20	1331	1349	1331	1350	0.93
27	30	2.2	1.5e+02	3.7	2.6	2	23	1373	1394	1373	1394	0.95
28	30	0.54	36	5.6	0.6	2	23	1401	1422	1400	1422	0.93
29	30	0.0017	0.12	13.4	1.8	2	23	1433	1455	1432	1455	0.96
30	30	0.57	39	5.5	1.8	2	19	1493	1510	1492	1513	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGACTTTTACTCCATCTTTACGGTGGACAATTCGTTGCAACTGGCCGAGATGGCAATGGATTGTGCCCGAATAAAAATTTATGATGGAGATGGTCTACCGGATAAAGTTTGCTCAGAGTGCATACAGAAGCTAAGTAGTGCTTACATATTCAAACAACAATGTGAGCGCGCAGACCAAGAGCTGCGACGTAATTATGTTCCACCACCAGGGTTCAGTATCAGCCCTCCACCACCAAATAGACAGAGCAGTGACTCAGCTTTCTCAAACCACACTGATAGCTCCAACCTCACCAAACCACCATCTTTCATCGAAGAAAAGGTATCACCAGCAACCAGAAACCGAAAACGGAGTATAGAAAGCGAGGATAACACCTCAGTAGGCGGTCGATCCAGCGATTTTAGGCCTACCAGCTCGAAACGCGTCGAAGAACTCAGAAAATCACAGAAAAAGAGACCTCGTTTACAATCTGAAAGCAACTCACAACAGGATTCAGATTACGAAGATAACAATAGCGGATCAGGCTTGCATGAAACCGACTCAGATGAACCGCTCATGAAGAACGCATTCAAATGTAAATCATGTTCGAAACAGTTTCAAACTTACAAGAGCTTGGCCATCCACAAAACTAGAATGCACGGCAAAAGTATTGAGAGCCCACTCGTAGAGGACGTCGTGGTCAACATACCAAAGAAAGCTATGGAGGATGCTGCAGATGTAGAAGATAAGTTAACCTGCGACAAGTGCGATAAAACTTTCAAACTGAAAATCATGCTGAAACGGCACGCCGATGTGTGCGGCAAAACGCCTATCAAGTCACCGCAAAAGGAGCTGCTCATATCCTTAGAACCTATAGACGCTAAGCAGAGGGTATCTCAACAAAATGAATCCCCACAAACTGAGCCCCAACAGACAGTTATTACTATTTCATGTGAATATTGCACTGCGAGGTTCAAAACTTTGGATAACCTAGCGAAACATATGAGGGTGGTTCACGCGGCTGTTTTGAAAAGAGAAACCGAACCAAACAAAAAAGTGCCAGTTCCTTGCCTGTACTGCAACAAAATGTTCGATGGGTATTATGAACATAACGCGCACTTCATGGTGTGTCCAAAGCTTGACGAATTTAAGCCGTTCGTATGCCCTGTATGTAATAAAACGACATCTAGAAAGACGTCGTACTACCAGCACATTAGGAACATGCATTTTGAACCTCGCGGCTTGAATGTGGAATCTGAGCCTGAAATACAGGAGTATCATGAATGTCGGGTTTGTTTGAAAAAGCTGGCAACTCAGGAGCAGCTTATTAAACACTTGTCGGCGCATGTGTCCAACATCCAAGTTGAGGGAGGTGCTGACAATGAATCCAGGGCAAGTATGGATGATGCAGGTTCTGTTCACTCGGTACAAAGCAATAAGAATCCTGCCAGTGGCAATTACAGTTGCACTGTGTGTGATAAAGAGTTCAAGTATAGGAAAGCCCTGATAACTCATCAACAAAAGTTCCACACAGATGTTCCTGTAGAGGTTAAAGTTGAACCACCCGATAAAGCTTCGACAAGTCTCTTAAGCGAAAAGCAGTACCGCTCCGATTCTGAATCTAgtcaagaagaagaagacaacACATGCGATATATGCGAGAAACACTTCTCGTATAAACGTCTTCTGATCCATCACAAGAAGACGAAACACAACATGAGCTCGGGGCACAAACGCGCCAAGATTTACCTCAAGGACTGTTCGGTCCGTTGCCTTATCTGTGACCTGCAAATGAAAGTCGGCGATATAAACGAGCACAATCAGAAACATATTGCCAAGAATATGAGGCCAAGAAACCTATATACCTGCGCGGTGGCTGGCTGCGGAGCCACGTTTAAGGCCTGCAGTGCACTCGCAACCCATATAAAACTAGTGCACAGATTAAAGCAGAAAATTGAAGAGAACACGGTTAATCCGTCGGATTTTTGTGAAGTCGTTGTGACCAAGTCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGGGAGGTTCCGATTGAGCAGGACGGCAAACCGCTGGTAGACCTGAGCGGCTTCACGTGCCCCATTTGTGGGAAGAAGATGCCTACGTTGATATCGCTGAAGAGGCACGTGAACTGGCACACTAATGTCGGCAAGAACTTAGAGAAGAAACACGAATGCTTTGTTTGCAAGGAGtcGTTCAGATTCCAATGTCACTACAAACTACATATGCGTGAGCATTACAATGATACAAACCTGGATCCGACGCACCTCACGTGCACCATCTGCGGTCGCAAGAGCAAGCATCTTCGTGCCGCCCAGGCGCACATGAACTACCACAAACAAACCCGCTTCAAGAACAAAGACTACCAGTGTTCCATCTGCGAAAGAGTGTTCCAGCATAGGAAAGTGTACCTTTCTCACATGGCCATACATTACAAGAAAGGAGATAGCGTTCAAAACACTATAGTGGGCCACGCATTGCCCAACAATTTCGATAAGAAGGCTTTTGACGGTACCCACACTTGCCAGCACTGCGGCAAAGTTTGTGACTCTGAGACTTCTCTAAAACATCACCTCATTTGGCACTCGTCGAAGACATTCCTCTACGGAGACCGACATGAGTGCCACATTTGCAAAGTGAAGTTCACCAACAAGAGACGACTGGAACTCCACACCAGAACTCACTTCGAAGATGACAATGGCCCTTTTAAGTGTACTATCTGTGGTAAAGGATACACAGATGAAAATTACTTCAGAAAGCATGTCAAAGGACATAACTTTGACCACCAATCGCACCAGAAGAGGATAGAGAACATCAGGAAAGATAAAGTGAAGTGTCCAATATGTTCGCGGTATTACAAAGACTTGGTCAAACTAATTCGTCACCTTCGACGGACGCACCCCGAAAGCAAAATGATCAAGAACGATCCTGATGCTCCCCCACAGCCGTACTTTTCATGTAAACTTTGCGCTAAAGTGTTTCTGGATGAACGAAGGCTTCAAGCACACGAAGAAGCGCACTTGAGGAAGCCGGAATTCTTTAAATGCAAGTTCTGTGGTAAGAAGACTATATCTCTGAAAAATCACAGAGTTCATATAAAAGGTCATTTGACGCAGAAGTATATGGACAATCCCTTGAAATGTCCGCACTGTGAAGAGACGTTCAGGCGAGGTTACGACCTGCACTACCACGTGCGAGACGCTCACGGTATCGAAGAGACGTGGATCGCTGATCGGACGGAGAAGCGCCTCGCCGGGCCGCTCAAGGACCTGCAGTGTTCGATTTGTATGAAGGTCCTTGCCAGCAAAGGGAACTTCGAGCGACATTTAGACTATCACAATTCCCTGAGGTGCAACTACTGTTTCGATTACTTCAGCTCCCTCAGGTTCCTGGAGGGACATTTAGCATTCTCATGTGAAAAAAAGAAACGGTTAGGCGACACTGAGATTTATcctaagaaaattaaatgtcacGTTTGTTACAAACCCTTCCATATTCAAGTGAAGCTGGACTGCCATCTCCGTACGCAGCATGATATCAAAGTCCGCAGAGAAGCTTCGTCGGGTAAGAAGGAAATTGTCTGCGATTATTGCTTTAAAGTATTCGAAAATGAGTACGCGCTATCTACTCACAGAGTTTACCATCGGACTATTGGATACTTTGGTTGTCTGTACTGCAAACGGAAGTTTAACACGATGACTTTATATCGCAAGCACAAGAATCACCACTTCGCACAGCTAAACGTGGACGAACCAACCAAGTGCGAACATTGTGATGAGACCTTCGTAGCATTTAGAGACATGATTTACCACATGCGAGACGACCACGGTGATGATAAAGACTGGGTGACGCTGCCCAAGGAGTCCATAGAGGAGCCGTGTAAGATCTGTAACAAGACGTTCTATAACTTACACCGGCATATGATGTACCATGAGGAGAACAGGTGTAAAAAGTGCGGAGAGTATTTCTTTTCAACGGCAGACTTCGATAACCATCTATGCCCCATAGAGAGTGACGAGGAGGACAACGCTCCCGCTATCAATGGCATCGAACGTCCGAAGTATGAGGAGTGCAACTTCTGCTTCAAACCAATCACTAGGAAAAGTTCTAAAGCGAAGCACGAACACATCCACAGAGGGTCTGGTTCTATATCGTGTAGGTTCTGCTGGCTGAAGTTCAAAACGATGGACGCGTTCAACATCCACGCTTTCTCACACCGAAGCAGAAAGTACAACAAAAAACCGATCAAGTGCAAGAAATGCAAAGAGAAGTTTGTAAAGTATGGGCTTTTTATGAAGCACATGAAATTAGTGCACAAGTCTATAAAAAAGATGCATTACAGAGCGACCGTGAAGCCGGAGCCGTGCGTGGTGTGCGGCGTCGAGTTCCCTAACTTACACAACCATTACCGCGCGCACTTGCTCAACCAGTGTCAGTCCTGCAACAAATACTTCACCTCCTCCAAACTGTACGCTATGCACGAATGCGATAAAGAAGACTCGGATCCTTCTAAAGTGTTCACGAGTGATGTCAGTTTGAACGAGTTGATCAACTCGTATGTTCCTAAGGATTTGAAAGATGATGAGAAATATTATGGTAACagtgatgatgaagatgaagaagatGAGATCCCTCAAGTGGCTGGTGAAGATGAAGACAGTCAGGACGATAAGGATTTCAAagatatagatttaaaaaatattgacattgaTGAGAATAACGATATAAGTTTTCAACCGTTATCTATTCAGTCACCGATCATATCAGATGTGTTGTCACTATACCAAAAAGAGATGAATCCCCCCGTTGTAGATGATGTTGTGAACTTATCGGATGATGATTCGGACGTGGACCACGTGGCCCAGAACCATGCTGATACTATTGTTattattgatgatgatgattga
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMDCARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSFIEEKVSPATRNRKRSIESEDNTSVGGRSSDFRPTSSKRVEELRKSQKKRPRLQSESNSQQDSDYEDNNSGSGLHETDSDEPLMKNAFKCKSCSKQFQTYKSLAIHKTRMHGKSIESPLVEDVVVNIPKKAMEDAADVEDKLTCDKCDKTFKLKIMLKRHADVCGKTPIKSPQKELLISLEPIDAKQRVSQQNESPQTEPQQTVITISCEYCTARFKTLDNLAKHMRVVHAAVLKRETEPNKKVPVPCLYCNKMFDGYYEHNAHFMVCPKLDEFKPFVCPVCNKTTSRKTSYYQHIRNMHFEPRGLNVESEPEIQEYHECRVCLKKLATQEQLIKHLSAHVSNIQVEGGADNESRASMDDAGSVHSVQSNKNPASGNYSCTVCDKEFKYRKALITHQQKFHTDVPVEVKVEPPDKASTSLLSEKQYRSDSESSQEEEDNTCDICEKHFSYKRLLIHHKKTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQKHIAKNMRPRNLYTCAVAGCGATFKACSALATHIKLVHRLKQKIEENTVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKHECFVCKESFRFQCHYKLHMREHYNDTNLDPTHLTCTICGRKSKHLRAAQAHMNYHKQTRFKNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGHALPNNFDKKAFDGTHTCQHCGKVCDSETSLKHHLIWHSSKTFLYGDRHECHICKVKFTNKRRLELHTRTHFEDDNGPFKCTICGKGYTDENYFRKHVKGHNFDHQSHQKRIENIRKDKVKCPICSRYYKDLVKLIRHLRRTHPESKMIKNDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYMDNPLKCPHCEETFRRGYDLHYHVRDAHGIEETWIADRTEKRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKRLGDTEIYPKKIKCHVCYKPFHIQVKLDCHLRTQHDIKVRREASSGKKEIVCDYCFKVFENEYALSTHRVYHRTIGYFGCLYCKRKFNTMTLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDDHGDDKDWVTLPKESIEEPCKICNKTFYNLHRHMMYHEENRCKKCGEYFFSTADFDNHLCPIESDEEDNAPAINGIERPKYEECNFCFKPITRKSSKAKHEHIHRGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCKEKFVKYGLFMKHMKLVHKSIKKMHYRATVKPEPCVVCGVEFPNLHNHYRAHLLNQCQSCNKYFTSSKLYAMHECDKEDSDPSKVFTSDVSLNELINSYVPKDLKDDEKYYGNSDDEDEEDEIPQVAGEDEDSQDDKDFKDIDLKNIDIDENNDISFQPLSIQSPIISDVLSLYQKEMNPPVVDDVVNLSDDDSDVDHVAQNHADTIVIIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_00637963;
80% Identity: -