Basic Information

Insect: Pelosia muscerda
Gene Symbol: -
Assembly: GCA_963691645.1
Location: OY829101.1:17339860-17349037[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.012 0.88 10.8 2.1 1 23 204 227 204 227 0.96

2 31 0.00092 0.068 14.3 0.2 2 19 259 276 258 279 0.93

3 31 9.1e-06 0.00068 20.6 0.3 2 23 319 341 318 341 0.96

4 31 4.6 3.4e+02 2.6 0.3 2 14 353 365 352 373 0.77

5 31 0.0002 0.015 16.3 1.6 1 23 383 406 383 406 0.97

6 31 0.024 1.8 9.8 0.6 1 23 425 447 425 447 0.95

7 31 3.9e-05 0.0029 18.6 1.8 1 23 485 508 485 508 0.97

8 31 0.0018 0.13 13.4 6.0 2 23 547 569 547 569 0.97

9 31 0.042 3.1 9.0 0.2 1 23 619 644 619 644 0.95

10 31 0.00056 0.042 15.0 0.1 1 23 698 720 698 720 0.97

11 31 0.007 0.52 11.5 7.2 1 23 731 753 731 753 0.98

12 31 0.02 1.5 10.1 1.3 2 23 765 786 764 786 0.96

13 31 0.0045 0.33 12.1 0.5 1 23 796 818 796 818 0.98

14 31 0.0078 0.58 11.4 6.7 1 23 847 869 847 869 0.96

15 31 0.00093 0.069 14.3 5.5 1 23 880 902 880 902 0.98

16 31 1.9e-05 0.0014 19.5 0.6 1 23 910 932 910 932 0.97

17 31 0.001 0.077 14.1 0.4 2 23 952 974 951 974 0.97

18 31 1 77 4.7 0.2 1 23 992 1014 992 1014 0.90

19 31 0.12 8.6 7.7 3.7 1 23 1021 1043 1021 1043 0.97

20 31 0.0071 0.53 11.5 1.3 2 23 1054 1076 1053 1076 0.94

21 31 0.018 1.3 10.2 0.2 2 23 1099 1120 1098 1120 0.95

22 31 0.012 0.87 10.8 0.2 3 23 1202 1222 1200 1222 0.92

23 31 8 6e+02 1.9 5.1 5 23 1232 1250 1230 1250 0.94

24 31 0.015 1.1 10.4 0.9 2 23 1261 1283 1260 1283 0.95

25 31 0.052 3.9 8.8 4.9 2 23 1300 1318 1300 1318 0.96

26 31 2.3 1.7e+02 3.6 2.8 2 20 1322 1340 1322 1341 0.93

27 31 8.1 6e+02 1.9 2.0 2 23 1364 1385 1364 1385 0.93

28 31 0.53 40 5.6 0.6 2 23 1392 1413 1391 1413 0.93

29 31 0.0014 0.11 13.7 1.4 2 23 1424 1446 1423 1446 0.96

30 31 4.1 3.1e+02 2.8 0.3 3 23 1463 1480 1462 1480 0.77

31 31 0.54 40 5.6 2.3 2 19 1484 1501 1483 1504 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.012	0.88	10.8	2.1	1	23	204	227	204	227	0.96
2	31	0.00092	0.068	14.3	0.2	2	19	259	276	258	279	0.93
3	31	9.1e-06	0.00068	20.6	0.3	2	23	319	341	318	341	0.96
4	31	4.6	3.4e+02	2.6	0.3	2	14	353	365	352	373	0.77
5	31	0.0002	0.015	16.3	1.6	1	23	383	406	383	406	0.97
6	31	0.024	1.8	9.8	0.6	1	23	425	447	425	447	0.95
7	31	3.9e-05	0.0029	18.6	1.8	1	23	485	508	485	508	0.97
8	31	0.0018	0.13	13.4	6.0	2	23	547	569	547	569	0.97
9	31	0.042	3.1	9.0	0.2	1	23	619	644	619	644	0.95
10	31	0.00056	0.042	15.0	0.1	1	23	698	720	698	720	0.97
11	31	0.007	0.52	11.5	7.2	1	23	731	753	731	753	0.98
12	31	0.02	1.5	10.1	1.3	2	23	765	786	764	786	0.96
13	31	0.0045	0.33	12.1	0.5	1	23	796	818	796	818	0.98
14	31	0.0078	0.58	11.4	6.7	1	23	847	869	847	869	0.96
15	31	0.00093	0.069	14.3	5.5	1	23	880	902	880	902	0.98
16	31	1.9e-05	0.0014	19.5	0.6	1	23	910	932	910	932	0.97
17	31	0.001	0.077	14.1	0.4	2	23	952	974	951	974	0.97
18	31	1	77	4.7	0.2	1	23	992	1014	992	1014	0.90
19	31	0.12	8.6	7.7	3.7	1	23	1021	1043	1021	1043	0.97
20	31	0.0071	0.53	11.5	1.3	2	23	1054	1076	1053	1076	0.94
21	31	0.018	1.3	10.2	0.2	2	23	1099	1120	1098	1120	0.95
22	31	0.012	0.87	10.8	0.2	3	23	1202	1222	1200	1222	0.92
23	31	8	6e+02	1.9	5.1	5	23	1232	1250	1230	1250	0.94
24	31	0.015	1.1	10.4	0.9	2	23	1261	1283	1260	1283	0.95
25	31	0.052	3.9	8.8	4.9	2	23	1300	1318	1300	1318	0.96
26	31	2.3	1.7e+02	3.6	2.8	2	20	1322	1340	1322	1341	0.93
27	31	8.1	6e+02	1.9	2.0	2	23	1364	1385	1364	1385	0.93
28	31	0.53	40	5.6	0.6	2	23	1392	1413	1391	1413	0.93
29	31	0.0014	0.11	13.7	1.4	2	23	1424	1446	1423	1446	0.96
30	31	4.1	3.1e+02	2.8	0.3	3	23	1463	1480	1462	1480	0.77
31	31	0.54	40	5.6	2.3	2	19	1484	1501	1483	1504	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGGGATTTTTACTCCATCTTTACGGTGGACAATTCCTTACAGCTGGCCGAGATGGCAATGGAATGTGCCCGCATCAAAATCTATGATGGAGATGGTCTACCAGATAAAGTTTGCTCAGAGTGCATACAGAAGCTAAGTAGTGCTTACATATTCAAACAACAATGTGAGCGCGCAGACCAGGAGCTACGACGAAATTATGTGCCACCACCAGGATTCAGTATCAGTCCTCCGCCACCGAATAGGCAAAGCAGTGACTCAGCTTTCTCTAATCACACTGATAGCTCCAATCTCACCAAACCTCCATCTTCCATCGAAGAAAAGATATCTCCAGCAAGCAGAACCCGAAAACGTAGCATAGAAAGTGAAGATAACACTTCGACGGGAGGTCGGTCCAGCGATTTTAGACCTACCACCTCTAAACGCGTCGAAGAACTGAGAAAATCTCAGAAAAAAAGACCTCGTTTACAATCTGATAATACTTCACAACAAGATTCGGATTACGAAGATAACAATAGTGGGTCAGGTTTGCATGAAACCGACTCAGATGAACCGCTTATGAAGAATGCATTCAAATGTAAATCGTGTCCGAAACAGTTTCAAACTTACAGAAGCCTGGCTATTCACACGACTAGAATGCACGGGAAGACTATTGATCAGGCACCTGAAGAGGATACCATCCTCGAAATACCAAAGAAAATTAGTGAGGATGCTGCAGACGTAGAAGACAAGTTAACATGCGAAAAATGCGACAAAACTTTTAAACTGAAGATCATGCTGAAACGTCATGCCGATGTGTGCGGGAAAATGCCTATCAAATCACCACAAAAGGAACTGCTCATATCATTAGAACCAATAGACGCCAAGCAGAATTTATCTCAACATAATCAACCTCAACAGACTGTTATCACTATTTCATGTGAATATTGTACTGCTAGGTTCAAAACTCTGGATAATCTAGCGAAACATATGAGGGTGGTTCACGCGGCAGTTTTGAAGAGAGAAAAGGTGTCAGTTCCTTGCCTGTACTGCAATAAAAAGTTTGATGGATATTACGAACACAATGCGCACTTCATGGTGTGTCCAAAACTAGACGAATCTAAGCCGTACGTGTGCCCTGTATGTGATAAATTCACATCTAGGAAGACCTCATACTACCAGCACCTTAGGAACATGCACTTTGATCCACTTAGATCGACTGTGGAATCTGAGCCTGAAATACAGCAGGAGTACCATGAATGTCGCGTGTGTTTGAAGAAGTTGGCATCCCAGGAACAGCTTATCAAACACTTGTCCGCGCACGTGTCCAACATCCAGGACGATGGCGCCGCTGACCATGAATCCAGGGCAAGTATGGATGATGCTGCCTCTGTTCACTCGGCACAAAGCAATACGTATCCTGCTAGCGGCAATTTCAGCTGTCCTGTCTGTGATAAAGATTTTAAGTATAGGAAAGCTCTGTTAACACATCAAAAAAAATTCCATACAGATGTACCTGTTCAGGTTAAAGTAGAACCCCCCGATAAAGCTTCAACAAGTCTCTTAAGCGAAAAGAACTACCGCTCCGATTCTGAATCTagtcaagaagaagaagacaacaCCTGCGATATATGTGAGAAGCACTTCTCTTACAAACGTCTTTTGATCCACCACAAGAGGACGAAGCATAACATGAGCTCGGGACACAAGCGGGCTAAGATCTACCTCAAAGACTGCTCGGTTCGCTGCCTGATATGCGACTTGCAAATGAAAGTCGGTGATATAAACGAGCACAATCAGACGCATATTTCCAAGGGTATGAAGCCAAGGAACCTATATACTTGTGCGGAAGCCGGCTGCAAAGCTACGTTCAAAGCCTGCAGTGCGCTTGCCACCCATATAAAACTAGTGCATAGATTAAAGCAGAAAATCGAAGAGAACACGGTTAATCCGTCGGATTTTTGTGAAGTCGTTGTGGCCAAGTCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTAGGGAGGTTCCGATAGAGCAAGACGGCAAACCGCTGGTAGACCTCAGCGGCTTTACGTGCCCCATTTGTGGGAAGAAAATGCCTACGCTGATATCGCTGAAGAGGCACGTGAACTGGCACACTAACGTCGGCAAGAACTTGGAGAAGAAATATGAATGCTTTGTTTGTAAGGAGTCTTTCAGATTCCAATGCCACTACAAGCTACATATGCGCGAGCATTACAAGGACACGAACCTGGACCCGACGCACCTCACGTGCACCATCTGCGGTCGCAAGAGCAAGCACCTTCGCGCCGCACAGGCGCACATGAACTTCCACAAACAAACACGCTTCAAGAACAAAGACTACCAGTGCTCCATCTGCGAAAGAGTGTTCCAGTATAGGAAAGTATACCTCTCTCACATGGCCATCCATTACAAGAAAGGAGATAGCGTTCAGAACACTATAGTAGGCGACGCGTTGCCCAACAATTTCGATAAGAAGGCTTTCGACGGCTCCCACACTTGCCAGCACTGTGGCAAAGTTTGCGACTCTGAGAACTCTCTGAAACATCATCTCATTTGGCACACGTCTAAAACTTTCCTCTATGGCGACCGACACGAGTGCCACATTTGCAAAGTGAAATTCACCAACAAAAGGCGCCTGGAACTTCACCTTAGAACACATTTTGAAGATGATAATGGCCCGTTTAAGTGCACCATCTGTGGTAAAGGATACACTGACGAAGGTTACTTTAGAAGGCACGTCAAAGGACACAACTTTGACCACCAATCTCACAAAAAGAGGATAGAGAAACTCCGAAAAGATAAAGTGAAGTGTCCAATATGTTCGCGGTATTACAACGATTTGATCAAACTAATCCGTCACCTTCGACGGACGCACCCCGAGAGCAAGATGATCAAGAACGATCCCGATGCTCCCCCACAGCCATACTTCTCATGTAAACTCTGCGCTAAAGTGTTTCTAGATGAACGCAGGCTTCAAGCACACGAAGAAGCTCACTTGAGGAAGCCAGAATTCTTTAAATGCAAGTTCTGTGGCAAGAAGACTATATCTCTCAAAAATCACAGGGTTCATATAAAAGGTCATCTAACGCAAAAGTATATAGACAATCCCTTGAAGTGTCCGCACTGTGAAGAGACGTTCGGACGAGGCTACGACCTGCACTACCACGTGCGAGACGTCCACGGTATCGAGGAGACGTGGATCGCCGAGAGGACGGAGAAGCGCCTCGCCGGGCCGCTCAAGGACCTGCAGTGCTCAATCTGCATGAAGGTCCTCGCCAGCAAAGGGAACTTCGAGCGACATTTAGACTATCACAATTCCCTGAGATGCAACTACTGTTTCGATTACTTCAGCTCCCTCAGGTTCCTAGAGGGACATCTAGCATTCTCGTGTGACAAAAAGAAACTTTTAGGCGATACTGAGATTTATCCtaagaaaattaaatgtcaCATCTGTTACAAACCTTTCCACATTCAAGTAAAGCTGGACTGCCACCTCCGCACGCAGCACGATATTAAAGTCTCCAGAGAAGCTTCGTCGGGTAAGAAGGAAATTATCTGCGATTATTGCTTCAAAGTATTCGAAAATGATTACGCTCTAACTACTCACAAAGTGTATCATCGCACTATAGGATACTTTGGGTGTATTTACTGCAAACGAAAGTTTAACACGATTACTCTATATCGTAAACACAAGAATCACCACTTTGCACAGCTGAACGTGGACGAACCGACCAAGTGCGAACATTGTGATGAGACTTTCGTAGCGTTTAGAGACATGATTTACCACATGCGCGACGAGCACGGAGATGACAAGGACTGGGTGACGCTGCCCAAGGAGTCCATAGAGGAGACGTGCAAGATCTGTAACAAGACATTCTACAACTTACACAGACATATGATGTACCATGAGGAGAACAGGTGCAAAAAGTGCGGGGAGTACTTCTTCTCAACGACGGATTTCGATAACCATCTGTGCCCCATAGAGAGTGACGACGAGGATACCACCCAGACTGTGAACGGATTCGAACGTCCGAAGTATGAGGAGTGCAACTTCTGCTTCAAACCAATCACCAGGAAAAGTTCCAAAGTGTTGCACGAACACATACACAAGGGATCTGGTTCAATATCGTGCAGGTTCTGCTGGCTGAAGTTCAAGACGATGGACGCGTTCAACATCCACGCCTTTTCACATCGAAGCAGGAAGTATAACAAGAAACCCATAAAATGTAAGAAATGCAAAGAGAAGTTTGTGAAATATggactttttataaaacacatgAAACTGGTGCACAAGAGCATAAAAAAGATGCATTACAGAGCCATGGTAAAGCCAGAGCCGTGCGTGGTGTGCGGCGAGGAATTCCCCAACTTGCACAACCACTACCGCGCCCACCTGCTCAACCAGTGTCAGAACTGCCGCAAGTACTTCACATCCTCAAAACTGTTCGCTATGCACGAATGTGATAAAGAAGACTCCGATCCTTCTAAAGTGTTCACGAGTGATGCCAGATTGAACGACTTGATCAACTCTTACGTCCCTAAGGATTTGAAGGATGACGAGAAATACTACGGCAACAGTGATGACGACGAACCCGAAGAAAATGTGTTGTCTCAAGTGTGCGAAGAAGATGAAGAGAGTCAGGACGACAAGGATATGGACTTCAAAGATATGGATATCAAAGATATTGATATTGACGAGAATAATGATATAACTTTTCAACCGTTGTCTATTCAATCACCGATCATATCGGATGTGTTGTCGTTATACCAAAAAGAAATGAATCCAGCGGTCGTAGACAATGATGTTGTAAACTTATCGGACGATGATTCCGACGTGGACCACGTGGCCCAGAACCATACTGatactattattattgatgatgatgatgattga
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSIEEKISPASRTRKRSIESEDNTSTGGRSSDFRPTTSKRVEELRKSQKKRPRLQSDNTSQQDSDYEDNNSGSGLHETDSDEPLMKNAFKCKSCPKQFQTYRSLAIHTTRMHGKTIDQAPEEDTILEIPKKISEDAADVEDKLTCEKCDKTFKLKIMLKRHADVCGKMPIKSPQKELLISLEPIDAKQNLSQHNQPQQTVITISCEYCTARFKTLDNLAKHMRVVHAAVLKREKVSVPCLYCNKKFDGYYEHNAHFMVCPKLDESKPYVCPVCDKFTSRKTSYYQHLRNMHFDPLRSTVESEPEIQQEYHECRVCLKKLASQEQLIKHLSAHVSNIQDDGAADHESRASMDDAASVHSAQSNTYPASGNFSCPVCDKDFKYRKALLTHQKKFHTDVPVQVKVEPPDKASTSLLSEKNYRSDSESSQEEEDNTCDICEKHFSYKRLLIHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHISKGMKPRNLYTCAEAGCKATFKACSALATHIKLVHRLKQKIEENTVNPSDFCEVVVAKSEPLDWIQSHNDFREVPIEQDGKPLVDLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKESFRFQCHYKLHMREHYKDTNLDPTHLTCTICGRKSKHLRAAQAHMNFHKQTRFKNKDYQCSICERVFQYRKVYLSHMAIHYKKGDSVQNTIVGDALPNNFDKKAFDGSHTCQHCGKVCDSENSLKHHLIWHTSKTFLYGDRHECHICKVKFTNKRRLELHLRTHFEDDNGPFKCTICGKGYTDEGYFRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICSRYYNDLIKLIRHLRRTHPESKMIKNDPDAPPQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCPHCEETFGRGYDLHYHVRDVHGIEETWIAERTEKRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLLGDTEIYPKKIKCHICYKPFHIQVKLDCHLRTQHDIKVSREASSGKKEIICDYCFKVFENDYALTTHKVYHRTIGYFGCIYCKRKFNTITLYRKHKNHHFAQLNVDEPTKCEHCDETFVAFRDMIYHMRDEHGDDKDWVTLPKESIEETCKICNKTFYNLHRHMMYHEENRCKKCGEYFFSTTDFDNHLCPIESDDEDTTQTVNGFERPKYEECNFCFKPITRKSSKVLHEHIHKGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCKEKFVKYGLFIKHMKLVHKSIKKMHYRAMVKPEPCVVCGEEFPNLHNHYRAHLLNQCQNCRKYFTSSKLFAMHECDKEDSDPSKVFTSDARLNDLINSYVPKDLKDDEKYYGNSDDDEPEENVLSQVCEEDEESQDDKDMDFKDMDIKDIDIDENNDITFQPLSIQSPIISDVLSLYQKEMNPAVVDNDVVNLSDDDSDVDHVAQNHTDTIIIDDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_00637963;
80% Identity: -