Basic Information

Insect: Dynastes tityus
Gene Symbol: RREB1
Assembly: GCA_029618875.2
Location: JAROYD020000003.1:34297496-34302438[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.4e-05 0.0097 17.9 1.4 1 23 64 86 64 86 0.98

2 16 0.0012 0.14 14.3 0.2 1 23 100 122 100 122 0.97

3 16 9.4e-06 0.0011 20.9 4.3 1 23 128 150 128 150 0.99

4 16 1.2 1.4e+02 4.9 0.1 1 23 210 234 210 234 0.83

5 16 0.024 2.9 10.2 3.0 2 23 240 262 240 262 0.95

6 16 0.099 12 8.2 1.0 1 21 309 329 309 330 0.95

7 16 0.12 15 7.9 0.1 1 23 461 483 461 483 0.96

8 16 1.1e-05 0.0013 20.7 0.7 1 23 492 514 492 514 0.99

9 16 0.0014 0.16 14.1 3.1 1 23 520 543 520 543 0.97

10 16 0.0014 0.16 14.1 2.1 1 23 897 920 897 920 0.95

11 16 0.00081 0.095 14.8 0.4 2 23 1130 1151 1129 1151 0.97

12 16 0.21 24 7.2 6.3 1 23 1157 1180 1157 1180 0.97

13 16 0.088 10 8.4 5.0 1 21 1208 1229 1208 1232 0.95

14 16 4.1 4.8e+02 3.2 3.6 1 23 1286 1309 1286 1309 0.93

15 16 0.027 3.2 10.0 0.4 3 23 1356 1376 1354 1376 0.93

16 16 0.012 1.4 11.1 5.9 1 23 1382 1404 1382 1404 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.4e-05	0.0097	17.9	1.4	1	23	64	86	64	86	0.98
2	16	0.0012	0.14	14.3	0.2	1	23	100	122	100	122	0.97
3	16	9.4e-06	0.0011	20.9	4.3	1	23	128	150	128	150	0.99
4	16	1.2	1.4e+02	4.9	0.1	1	23	210	234	210	234	0.83
5	16	0.024	2.9	10.2	3.0	2	23	240	262	240	262	0.95
6	16	0.099	12	8.2	1.0	1	21	309	329	309	330	0.95
7	16	0.12	15	7.9	0.1	1	23	461	483	461	483	0.96
8	16	1.1e-05	0.0013	20.7	0.7	1	23	492	514	492	514	0.99
9	16	0.0014	0.16	14.1	3.1	1	23	520	543	520	543	0.97
10	16	0.0014	0.16	14.1	2.1	1	23	897	920	897	920	0.95
11	16	0.00081	0.095	14.8	0.4	2	23	1130	1151	1129	1151	0.97
12	16	0.21	24	7.2	6.3	1	23	1157	1180	1157	1180	0.97
13	16	0.088	10	8.4	5.0	1	21	1208	1229	1208	1232	0.95
14	16	4.1	4.8e+02	3.2	3.6	1	23	1286	1309	1286	1309	0.93
15	16	0.027	3.2	10.0	0.4	3	23	1356	1376	1354	1376	0.93
16	16	0.012	1.4	11.1	5.9	1	23	1382	1404	1382	1404	0.98

Sequence Information

Coding Sequence: ATGGATGCGACAACCACTGAACCAAATATTAGCCATACCCAAGAACCGCCAGCCAACCAAAGCAGTAGAAGCGATTCTGGCTTCCTTTCCATCACGAATAATACTACCTATCCAGATTCCGAAGAAAGAACTCACCAGGAAAGCGGTGACACCGACAACAGGAGCGATTGCAGTTCTCCAGGGCGAAAATATTATTGTCCAATCTGCGACACCATGTTAACGTCCCAGCACGAATTTACGCTGCATATTCGATCTCATAACAACGACGCCGCAGAATCGCATTTTCAAGAAAAAGGCTTCGTATGTAGAATTTGCTCGAAAATATTGAGTTCGAGTTCGAGTCTAGATCGCCATGTACTTGTACATAGCGGAGAGAGGCCTTTTACGTGTAAATATTGCGGTGACACATTTACAACGAACGGAAACATGCATAGGCATATGCGGACGCATTCGTTTAAAAACGATTACGAGTCAGATGGTAGTACAGACAGTAGCAGTAGTAATTCTAAGAATGTAGAGTACAATAACAATAAGGTCGATAGGCACGAGAAACGAAAACTAACACTATGCGAAGATTATAAACATTCCCGAATAAAGCTTGAAGAAGTcgataaaaacaatgaaaaatataaatgtcCTGTTTGTGAACGTGATGATTTCACGAGCAAATCTGTTTTGGAGGTACACTTAGAGGACAACCATCCAGATTTCCCAGCAAAATGTCACGATTGCAAtagtatatttaaaaacaacaaacttttaAGCACCCATAAAGTCACCGTCCACGAAgaaaacagtaaaataaaaaactcgGTTGTTGGATTTAAAGATCTCACTTTTGTCGATTTTTCAAGCGAAAAATTTCCTCATATTGCCAGACATGAATGTGAAAAAAATCTCCACAAGGCTTCCACGggattaaaatttcaatgtaaAAAATGTTCTAGAGCGTTTCCGTGTGCAAATTCTTTAGAAATCCATCAAAAGGAATGTTGCGTTGGTTTGGATTTAAGTATTAGCAATGAGAACTCTATCGACTTATCGAAATCATCACCATTAAACGAAAGCGATATCAAACGAGCTGATTTCTTTTCGAGATTAGATTTACAGGACAATTCGCCCGAGAAGAACCATTTAGATACGGCtacattacaacaaaaattgttgcaaACGATGAAAAATATCGATAACAGCAAAGACTTAGCAGATATCCAATCGATCATATCTATGACAACGAACGGTAGCTTTTTACAACATTTGCAAACAAAACCTGATATACTAAATCAAACAACGAATGATTTACAGCTAGAGAAAACGGAAGAAGAGGAAGCTCAGGATATATTTGCGAAAGAATTTCGCAAAATGAAACTGCGTGGTGAGTTTCCATGTCGACTGTGCAGCGCGGTATTTCCAAACTTACGCGCGCTAAAAGGCCACAATCGCGCTCACTTAAACGGCAACACCAACGGAACGTACAGGTGTAATATGTGCCCTCATTCTTCTGTGGACAAAGCTGCTTTAATACGTCATATGCGCACCCACAATGGCGATCGACCTTACGAATGTAGTCTGTGCAATTATGCCTTTACAACGAAAGCGAATTGCGAACGGCACTTAAGAAATAGACATGCAAAAACTACGCGAGAGGAAGtgaaaaaatcaataatttatcaTCCTTCCGAAGATCCAACTAACGAcgatataaataaattagttgCTAGGGAAGACCGAAAAGTAAACTCCAGCTTCAATGTTGCTGAATCAAACGAAATTTGCTCCGAAAAAACAAGTTCCACGCCGAAGATACATCCTGAATTGTTTACCACGCGTACTGAAACCATTCCATTGTCAGCACAAATTCCAGCTCCATGGAGAAATCAATTTCTGGATAAATCGCCAACAAAATCAATTCCGGAAAGCAAACTAAAAACCGACCTACCATATTTGCAAccacaaattaattttatgccGAAATCTGATAATGTATCAACACCTCAAAAATCAATCGCAAAAATTCATGTAAAAAATTTAGATACCATGAAGGAATTTGATTGCAGCGAAGATGAAAGATATGAAAATTTCGTTGAAGACGAACCAATGGATCTAAGCAAAAAGAAGCCTCCAGATGTTGAAGTTACAAGTGACAACAATACCGATGAATCTCCTGAAGatttatcaaacaaaaaacCCAATTTAGTTCCGTTCAACATGAATGAAATATTGGCACAGCAGTTGTTGATGAAGAATACTCCCAAAATAGATCATACAAGCTTCTACGCAGCGCAGTTTGCTTTGTTGCGCAATTCTTTTCCCGGATGGTCTCCATTTTCTCCAATTAATCCGTTACTTTTCCAAAACATGCAGAATCCAATTATTCCTCAAGAACAGGAGGTTAAGCGTCTACAACAATTATGTGGCGGGGGCATGATCAACAGTTTAAATGAAAGATCGTCGTTTCAAAGTTTAAATAGAAATCCGATTTTAAACAACTTGAACGTTCAGAATCAAATTAAGAGAGAAGAAATGACACCACTCACTCTAAACGTTGAACCAACGTTTAACGAAAGTAATGCAGTACCGCAACCTAAATCAGATCTACTGCAGTCACCTAATTCAGTTAAAATGGTAATTAAAAATGGTGTTTTAATGCCTAAACAAAAACAAAGGCGTTATCGTACTGAAAGACCTTTTGCATGCGAACACTGCTCAGCTCGTTTCACGCTCAGATCTAATATGGAACGTCATATTAAGCAACAACATCCGCAATATTGGTCTCAAAGACAACGTTCGAATATTGGAAGCAGCGGCAGAAAAAGTGCAACTCTAACAGCAAATTTACACATTCCAAACTATGAACAGCCAAAGACTCACCAAGACTACGAAGAGAATAAAGGTGGTAATCACATATCGGAAAAGATTAAATATGCCATATTAGCACAACATTTAAGAACTAATCAAGAGTACAAAAACTCAATATTAATGCCAAAGAAGGAAGACGACGACGAATGCGCTCTAGTTATTGACGAGAATGAATCGAAACCAGAACATTCGGAAGATAAAAAATTTCATTCCAATAATTTCATTCCTACATTAGACACTTTACTCTGCAATAAACCAAGTAAACAGGACGAAACACAAGACTTAGTATCGGTGTCACGTCTGCTTGATAATGCTTCTCAACAACCATTCAAGGATTACTTTAAAAGAGATGGAGACGAACAAGATGGTGAAGGTGGAAGTGAAGAGGATGAAGAGGGTTTGGTAGCTAGCGGCAGTACGAGTGAAGGCAATTCTGGTACTGATGAAAATAAATCTGAATCCGAAAATTTATCAAATCAGGGTCCAGTTAAGAAGAAGTCAGCGTACTCCTTAGCGCCTAACCGAGTCAGCTGTCCATACTGCAGCAGAAAGTTTCCTTGGACATCTTCATTGCGAAGACATATTCTTACTCACACCGGCCAAAAACCTTTCAAGTGCAGCCATTGCCCTCTACTCTTCACAACCAAATCAAATTGTGACCGACACTTACTTCGAAAACATGGCAGCTCGGCAACAACGATCGCAAATGAATCAGGAAGTAATAACGCAAACTATTTAATGCGAAACGTTCCAGAAAGACCgttcaaatgttcaaattgtcCCAGCAGCACATTCTCGACATATTCCAATCTGAAGAAACATATGAACTGTAAGCACGGTTCACAGGCGGACGATAAAGCTCAAGGTTATGAAGCAGGCAGTTCCGAGGATGAGAAACAAAATATGCAAGACCAAAACAGCGACTGGAGTACAGCGGTTACGACAAATAAATTACCAATAGAAAATCAAAACATACAAAGTAATTCGGACCTTCCGTTTAAATGTCATCTTTGCGAAGGGTCATTTTCCGAAAGAAACGATTGTTTAGATCACATTAGGGACAAGCATCCTTCTGAATATGATCTTTTGATGTCTAAAAATGCTCTAGATaacaacgcttcaacaccagAGGAATCTGCTAATCATGACGAAGATGAAAATGAAGCACGTGGGAAATTTCCGGATTATTCCAATAGAAAAGTAATCTGCGCGTTTTGCATGAGACGATTTTGGTCCGCTGAAGATCTAAGAAGACACATGCGGACTCACACGGGTGAAAGACCGTTTAGTTGCGACATCTGCCGTAGGCGATTCACTCTTAAACATAGCATGTTACGTCATCGCAAAAAGCACAATTTGGCTTTTGAAAATGACAATTTAAATAGTGATGAAGATAATAGAAGTCCAACCCTAGGAAAAGTAAAGGCGAGCATGGTAAAAGTTGCGGATAAAACTGATGAATCGGACGGAAACGAAGGAAATGATTTAATCAGTAATTTGTTAGGAATCCAGGATAGATCGATAATAGAGCAAGTTTTAACAGCATCTCCAGATGATGCAGCAAAATTACTAGGAGTGAAAAACGGTAATCAAGACTAG
Protein Sequence: MDATTTEPNISHTQEPPANQSSRSDSGFLSITNNTTYPDSEERTHQESGDTDNRSDCSSPGRKYYCPICDTMLTSQHEFTLHIRSHNNDAAESHFQEKGFVCRICSKILSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSFKNDYESDGSTDSSSSNSKNVEYNNNKVDRHEKRKLTLCEDYKHSRIKLEEVDKNNEKYKCPVCERDDFTSKSVLEVHLEDNHPDFPAKCHDCNSIFKNNKLLSTHKVTVHEENSKIKNSVVGFKDLTFVDFSSEKFPHIARHECEKNLHKASTGLKFQCKKCSRAFPCANSLEIHQKECCVGLDLSISNENSIDLSKSSPLNESDIKRADFFSRLDLQDNSPEKNHLDTATLQQKLLQTMKNIDNSKDLADIQSIISMTTNGSFLQHLQTKPDILNQTTNDLQLEKTEEEEAQDIFAKEFRKMKLRGEFPCRLCSAVFPNLRALKGHNRAHLNGNTNGTYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDDINKLVAREDRKVNSSFNVAESNEICSEKTSSTPKIHPELFTTRTETIPLSAQIPAPWRNQFLDKSPTKSIPESKLKTDLPYLQPQINFMPKSDNVSTPQKSIAKIHVKNLDTMKEFDCSEDERYENFVEDEPMDLSKKKPPDVEVTSDNNTDESPEDLSNKKPNLVPFNMNEILAQQLLMKNTPKIDHTSFYAAQFALLRNSFPGWSPFSPINPLLFQNMQNPIIPQEQEVKRLQQLCGGGMINSLNERSSFQSLNRNPILNNLNVQNQIKREEMTPLTLNVEPTFNESNAVPQPKSDLLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNIGSSGRKSATLTANLHIPNYEQPKTHQDYEENKGGNHISEKIKYAILAQHLRTNQEYKNSILMPKKEDDDECALVIDENESKPEHSEDKKFHSNNFIPTLDTLLCNKPSKQDETQDLVSVSRLLDNASQQPFKDYFKRDGDEQDGEGGSEEDEEGLVASGSTSEGNSGTDENKSESENLSNQGPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGSSATTIANESGSNNANYLMRNVPERPFKCSNCPSSTFSTYSNLKKHMNCKHGSQADDKAQGYEAGSSEDEKQNMQDQNSDWSTAVTTNKLPIENQNIQSNSDLPFKCHLCEGSFSERNDCLDHIRDKHPSEYDLLMSKNALDNNASTPEESANHDEDENEARGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNLAFENDNLNSDEDNRSPTLGKVKASMVKVADKTDESDGNEGNDLISNLLGIQDRSIIEQVLTASPDDAAKLLGVKNGNQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00956526; iTF_01121064; iTF_01499125; iTF_00070690; iTF_00990565; iTF_00434354; iTF_01124041; iTF_00308298; iTF_01253052;
90% Identity: iTF_01121064; iTF_00956526; iTF_01499125;
80% Identity: -