Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: Rreb1
Assembly: GCA_963170755.1
Location: OY720676.1:67683662-67689085[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0049 1.6 12.5 2.5 1 23 64 86 64 86 0.98

2 16 0.0013 0.43 14.3 0.2 1 23 99 121 99 121 0.97

3 16 1e-05 0.0034 20.9 4.3 1 23 127 149 127 149 0.99

4 16 0.0039 1.3 12.8 0.1 1 23 209 233 209 233 0.89

5 16 0.13 43 8.0 2.4 2 23 239 261 238 261 0.96

6 16 0.19 64 7.4 0.6 1 21 308 328 308 329 0.94

7 16 0.14 45 7.9 0.1 1 23 460 482 460 482 0.96

8 16 1.2e-05 0.0039 20.7 0.7 1 23 491 513 491 513 0.99

9 16 0.0015 0.49 14.1 3.1 1 23 519 542 519 542 0.97

10 16 0.0013 0.42 14.3 2.8 1 23 916 939 916 939 0.96

11 16 0.00034 0.11 16.1 0.4 2 23 1154 1175 1153 1175 0.97

12 16 0.23 74 7.2 6.3 1 23 1181 1204 1181 1204 0.97

13 16 0.45 1.5e+02 6.3 4.8 1 20 1232 1252 1232 1256 0.93

14 16 9.4 3.1e+03 2.1 3.1 1 23 1310 1333 1310 1333 0.91

15 16 0.03 9.9 10.0 0.4 3 23 1380 1400 1378 1400 0.93

16 16 0.014 4.4 11.1 5.9 1 23 1406 1428 1406 1428 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0049	1.6	12.5	2.5	1	23	64	86	64	86	0.98
2	16	0.0013	0.43	14.3	0.2	1	23	99	121	99	121	0.97
3	16	1e-05	0.0034	20.9	4.3	1	23	127	149	127	149	0.99
4	16	0.0039	1.3	12.8	0.1	1	23	209	233	209	233	0.89
5	16	0.13	43	8.0	2.4	2	23	239	261	238	261	0.96
6	16	0.19	64	7.4	0.6	1	21	308	328	308	329	0.94
7	16	0.14	45	7.9	0.1	1	23	460	482	460	482	0.96
8	16	1.2e-05	0.0039	20.7	0.7	1	23	491	513	491	513	0.99
9	16	0.0015	0.49	14.1	3.1	1	23	519	542	519	542	0.97
10	16	0.0013	0.42	14.3	2.8	1	23	916	939	916	939	0.96
11	16	0.00034	0.11	16.1	0.4	2	23	1154	1175	1153	1175	0.97
12	16	0.23	74	7.2	6.3	1	23	1181	1204	1181	1204	0.97
13	16	0.45	1.5e+02	6.3	4.8	1	20	1232	1252	1232	1256	0.93
14	16	9.4	3.1e+03	2.1	3.1	1	23	1310	1333	1310	1333	0.91
15	16	0.03	9.9	10.0	0.4	3	23	1380	1400	1378	1400	0.93
16	16	0.014	4.4	11.1	5.9	1	23	1406	1428	1406	1428	0.98

Sequence Information

Coding Sequence: ATGGACTTGACGACAACAGAACCAAATGTTGCCAATACCAAAGAACCACCAAACAACCAAAGCAACCGAAGTGATTCAGGTTTTTTATCCGCCACCAACAATACATCATATCCAGACTCAGAAGACAGAACACACCAAGAAAATGGAGATACCGATAATAGGAGTGACTGCAGTTCACCGGGCAGAAAATATTACTGTTCTGTTTGTGAAACGATGCTTACGTCTCAACACGAATTCACATTACATTTAAGATCTCATAACAACGATTCGGATTCTCAGTTCCAAGAGAGAGGATTCGTCTGCAGAATTTGTTCCAAAATACTGAGTTCAAGTTCAAGTTTGGACCGCCACGTTCTCGTGCACAGTGGTGAGAGACCCTTCACATGTAAATACTGTGGTGATACGTTTACAACGAACGGTAACATGCATAGACATATGAGAACTCACTCGTTTAAGAATGACTACGAATCAGACGGTAGCTCAGATAGTAGTAGTAGCAATTCCAAGCATgtcgaatataacaataataagatCGACAAACATGAAAAGCGCAAATTAGAACCATGTGAGGATTACAAAAGTTCGCGCATTAAATTAGAAGAAGATGAAGGCAGTTGTGAAAAATATAAGTGTCCGGTGTGCGGACGTGATGACTTTACAACTAGATCAAATTTAGAAGTACACATAGAGGACAACCATCCGGACTATCCGGTTAAGTGTCACGAGTGCAGCAgtgtttttcaaaataataaactcCTATCTATGCATAAAATTACCTTCCACGAAGACATTAGCAAAGTTAAGAATTCAGTGACTGGGTTTAAAGATCTCACTTTTGTCGACTTTTCCAGCGAAAAATTTCCATACATTGCCAGGCACGAATGTGAGAAAAATTTGCACAAAGCTTCTGCCGGTCTGAAATTTCAATGTCAAAAATGTTCAAGAGCATTCCCTTGTGCTAACTCCTTAGAAATTCACCAAAATGAATGTTGCGTCGGTTTAGATTTAAGCATTAGCAATGATAGTTCCGTAGATTTAACTAAATCCACAAAGATAAACGAAAATGCCATAATACGCGCAGATTTCTTTTCGAGACTTGATCTGCAAGATAATTCTCCAGAAAAGAATCCCACCAGCAGAAACAAACTGCAACAGAAATTATTAGAGACTGTGAAAAACATTGACACTAGCAAGGACTTAGCTGATATACAAACCATAATATCTATGACAAGCACCGGTAGTTTCTTGCAACATTTGCAAACAAAAAGTGATGTACCGAATCAAACAACTAACGATTTGCAATCAGAGAAAACCGAAGAAGAAGAGGCGCAAGATATTTTTGCGAAAGAATTTCGTAAAATGAAACTACGCGGAGAATTTCCCTGCCGTTTATGTAGCGCAGTTTTTCCAAACTTGCGAGCTCTGAAAGGCCACAATCGTGCTCACTTGAATGGTAATACGAATGGAACGTACAGATGCAACATGTGTCCTCATTCTTCTGTAGACAAAGCTGCATTAATCCGTCATATGCGTACTCATAATGGGGATCGACCTTACGAGTGCAGTTTGTGCAATTATGCCTTCACGACAAAGGCAAACTGCGAACGACATTTAAGAAATCGACATGCTAAAACAACCAGGGAAGAAGttaaaaaatctataatttaccATCCTTCCGAAGATCCCACTAATGATGAGATGAATAAGCTAACAATCAGAGACGATACAAAGAAAATCAATTCTAGTTTTAATTCAATAGACTCCAATGATATAAGCCAAGAAAAACTGAGAAGCTCAACACCGAAATTATCTGCAGATTTGTACACTGGTCATAGTGAAACTAGTCCTTTAATTCCTATTTCCGCTTGGCGAAATCCATTTTTGGACAAATCACCAACAAAACCTCATCACAGCATAAAcgacataataaaaaatgagaatACAAAAACACTGCAAGACCATGGACTTAAAAATGAATTATCATACCTACAACCGCCGATTAATTTTATTCCCAAACCAGATAATGCATCAACTCCTCAAAAAATTCCTCCTATAATACATGTAAAGAATTTGGATACACTCATACAAGCACCAGAATACGAATACAGCGAAGACGAAAAATGCGAGAGCTATGCAGATGATGAACCTATGGATCTGAGTAAAAAGAAAACAGCAGATATAGAACTTGAAAGCGATAGACAAGACAATGAAACCCCAGAAGATTTATCCAATAAACATCCAAATTTGTCTCCTTTTAATATGAGTGAAATTTTGGCTCAACAACTGCTAATGAAAAATACTCCTAAAATAGATCATGCTGCAAGTTTCTATGCTGCACAAATTGCATTACTGAGAAACTCATTTCCAGGGTGGCCACCATTTTCAGCAATAAATCcattattatttcaaaatatgcCAAATCCTGTACTTCCCCAAGAACCAGAAGTAAAACGTTTGCAACGCCAGTTGTGTGGCGGTGGAATGATTAATAGTCTCAGTGAAAGGCAGTCTTTTCAAAATCTTAATAGTAGTTCTATATTAAACAATTTCAAAGCTCCAAATCATATTAAATCTGAAGAAATGTCTCCCCTAAGTTTAAACGTTGATGCAGGATTTGCAGAAAATAGTGCAATTCCTCAACCTAAGCCAGATTTAATACAATCGCCCAATTCAGTGAAAATGGTAATTAAAAATGGTGTGTTAATGCCAAAACAGAAACAAAGACGTTATAGAACAGAACGACCATTCTCTTGTGAACATTGTTCTGCAAGATTTACTTTGAGGTCAAACATGGAAAGACATATTAAACAGCAACATCCTCAATTTTGGTCGCAAAGACAACGATCAAATATAGGTAATACTGGAAGGAAAAGTACTGGACTTCCTTCAAGTTTACATTTGTCCAACTATGAACAATCAAAGAGTCAGGATTACGAAGACAACAAAGGGAATCACATATCTGACAAAATCAAGTATGCCATATTAGCTCAACATTTGAGAACGaatcaagaatacaaaaatgcGTTGATTCCAAAGAAAGAGGACGATGATGAATGTGCCTTGGTAATCGACGAGAATGAATCTAAACATGAAGGTGTAAATGAGAATAAACATATACTTGACGACAACGCCCAAGAGAGTCTAGAAAGCCATATGCCAAAATTAGACGCTTTGCTCTCTAACAAACCATCCAAACAAGATGAGACACAAGATTTAGTGTCTGTATCACGTTTATTAGATAACGCATCTCAACAGcaatttaaagaatatttcaagCGAGAGAGTGAAGATCAGGATGGTGAAGGAGGAAGTGAGGAAGATGAAGAAGGTTTGGTAGCCAGTGGAAGTACAAGTGAAGCAAATTCGGGTACTGACGAGAACAAATCTGAATCCGAAAATGTCACCAGCCGAGGCCCAGTCAAAAAAAAATCCGCATATTCCTTAGCACCAAATAGAGTTAGCTGCCCTTATTGCAACAGAAAGTTTCCTTGGACATCATCGTTACGAAGACATATTCTCACCCATACTGGTCAGAAGCCCTTCAAATGCAGTCATTGTCCATTACTATTTACCACAAAATCCAACTGCGATCGACATTTACTTCGAAAACATGGTAGCTCAGCTACAACAATCGCAAACGAAGGAAGCAATAATAATGCAAACTATCTTATGAGAAATGTACCGGAAAGACCGTTTAAATGTTCTAGTTGTCCCAGTAGTACATTTTCAACATACTCTAACCTAAAAAAACACATGTCTTGCAAGCATGGTTCGCAGATAGACGATAAATCACAAGGGTATGAAGCAGGCAGCTCAGAGGATGAAAAACAAAATCAACGAGAACAAAAAAGCGATTGGGATGTTCATCTTTCGAATAACAAGATGTCTATTGAAAACCAAAGTACCCAAACTAATTCGGATTTACCATTTAAGTGTCACCTCTGTGAAGGTTCTTTTGGAGACAGAAATGATTGTCTTGACCATATCAAAGATAAGCATCCGTCTGAATATGATTTATTAATGTCTAAAAATGCGCTGGATAACAGCGCTTCAACTCCGGAAGAATCCACCAATCATGACGAAGATGAAAACGAAATTCGGGGAAAATTTCCTGATTATTCCAATCGAAAAGTGATTTGTGCGTTTTGTATGCGCAGATTTTGGTCAGCTGAAGATTTAAGAAGACACATGCGAACACATACGGGAGAACGACCCTTCAGTTGTGACATCTGTCGAAGAAGATTTACGCTGAAACACAGTATGTTACGGCATCGCAAAAAACACAATGTTTCATTTGAAAATGACAATATCAATAGTGATGAGGATAATGTTAGTCGTAGTTTCGAAAAACTAAAGAACAGCATTGCGAAGTTCTCTGATAAAACAGACGAATCTGATGGTAACGAAGGCAACGACTTAATTAGCAATTTATTAGGAATACGGGATAAATCAATTATAGAGCAGGTATTAACGGCCTCTCCAGACGACGCAGCGAAATTATTAGGGGTCAAGAACGGTAATCAagattaa
Protein Sequence: MDLTTTEPNVANTKEPPNNQSNRSDSGFLSATNNTSYPDSEDRTHQENGDTDNRSDCSSPGRKYYCSVCETMLTSQHEFTLHLRSHNNDSDSQFQERGFVCRICSKILSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSFKNDYESDGSSDSSSSNSKHVEYNNNKIDKHEKRKLEPCEDYKSSRIKLEEDEGSCEKYKCPVCGRDDFTTRSNLEVHIEDNHPDYPVKCHECSSVFQNNKLLSMHKITFHEDISKVKNSVTGFKDLTFVDFSSEKFPYIARHECEKNLHKASAGLKFQCQKCSRAFPCANSLEIHQNECCVGLDLSISNDSSVDLTKSTKINENAIIRADFFSRLDLQDNSPEKNPTSRNKLQQKLLETVKNIDTSKDLADIQTIISMTSTGSFLQHLQTKSDVPNQTTNDLQSEKTEEEEAQDIFAKEFRKMKLRGEFPCRLCSAVFPNLRALKGHNRAHLNGNTNGTYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEMNKLTIRDDTKKINSSFNSIDSNDISQEKLRSSTPKLSADLYTGHSETSPLIPISAWRNPFLDKSPTKPHHSINDIIKNENTKTLQDHGLKNELSYLQPPINFIPKPDNASTPQKIPPIIHVKNLDTLIQAPEYEYSEDEKCESYADDEPMDLSKKKTADIELESDRQDNETPEDLSNKHPNLSPFNMSEILAQQLLMKNTPKIDHAASFYAAQIALLRNSFPGWPPFSAINPLLFQNMPNPVLPQEPEVKRLQRQLCGGGMINSLSERQSFQNLNSSSILNNFKAPNHIKSEEMSPLSLNVDAGFAENSAIPQPKPDLIQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGNTGRKSTGLPSSLHLSNYEQSKSQDYEDNKGNHISDKIKYAILAQHLRTNQEYKNALIPKKEDDDECALVIDENESKHEGVNENKHILDDNAQESLESHMPKLDALLSNKPSKQDETQDLVSVSRLLDNASQQQFKEYFKRESEDQDGEGGSEEDEEGLVASGSTSEANSGTDENKSESENVTSRGPVKKKSAYSLAPNRVSCPYCNRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGSSATTIANEGSNNNANYLMRNVPERPFKCSSCPSSTFSTYSNLKKHMSCKHGSQIDDKSQGYEAGSSEDEKQNQREQKSDWDVHLSNNKMSIENQSTQTNSDLPFKCHLCEGSFGDRNDCLDHIKDKHPSEYDLLMSKNALDNSASTPEESTNHDEDENEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVSFENDNINSDEDNVSRSFEKLKNSIAKFSDKTDESDGNEGNDLISNLLGIRDKSIIEQVLTASPDDAAKLLGVKNGNQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627621;
90% Identity: -
80% Identity: -