Basic Information

Insect: Dermolepida albohirtum
Gene Symbol: RREB1
Assembly: GCA_031893035.1
Location: JAVIWB010000555.1:1432350-1437108[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00013 0.023 16.2 1.4 1 23 64 86 64 86 0.98

2 16 0.00051 0.094 14.3 0.2 1 23 99 121 99 121 0.97

3 16 4.1e-06 0.00074 20.9 4.3 1 23 127 149 127 149 0.99

4 16 0.0046 0.84 11.3 0.1 1 23 209 233 209 233 0.88

5 16 0.12 23 6.8 2.1 2 23 239 261 239 261 0.96

6 16 0.071 13 7.5 0.8 1 21 308 328 308 329 0.95

7 16 0.055 9.9 7.9 0.1 1 23 460 482 460 482 0.96

8 16 4.7e-06 0.00085 20.7 0.7 1 23 491 513 491 513 0.99

9 16 0.00059 0.11 14.1 3.1 1 23 519 542 519 542 0.97

10 16 0.00051 0.092 14.3 2.8 1 23 918 941 918 941 0.96

11 16 0.00013 0.024 16.1 0.4 2 23 1155 1176 1154 1176 0.97

12 16 0.09 16 7.2 6.3 1 23 1182 1205 1182 1205 0.97

13 16 0.0056 1 11.0 1.5 1 20 1233 1253 1233 1254 0.96

14 16 5.9 1.1e+03 1.5 2.9 1 23 1311 1334 1311 1334 0.88

15 16 0.012 2.2 10.0 0.4 3 23 1381 1401 1379 1401 0.93

16 16 0.0054 0.98 11.1 5.9 1 23 1407 1429 1407 1429 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00013	0.023	16.2	1.4	1	23	64	86	64	86	0.98
2	16	0.00051	0.094	14.3	0.2	1	23	99	121	99	121	0.97
3	16	4.1e-06	0.00074	20.9	4.3	1	23	127	149	127	149	0.99
4	16	0.0046	0.84	11.3	0.1	1	23	209	233	209	233	0.88
5	16	0.12	23	6.8	2.1	2	23	239	261	239	261	0.96
6	16	0.071	13	7.5	0.8	1	21	308	328	308	329	0.95
7	16	0.055	9.9	7.9	0.1	1	23	460	482	460	482	0.96
8	16	4.7e-06	0.00085	20.7	0.7	1	23	491	513	491	513	0.99
9	16	0.00059	0.11	14.1	3.1	1	23	519	542	519	542	0.97
10	16	0.00051	0.092	14.3	2.8	1	23	918	941	918	941	0.96
11	16	0.00013	0.024	16.1	0.4	2	23	1155	1176	1154	1176	0.97
12	16	0.09	16	7.2	6.3	1	23	1182	1205	1182	1205	0.97
13	16	0.0056	1	11.0	1.5	1	20	1233	1253	1233	1254	0.96
14	16	5.9	1.1e+03	1.5	2.9	1	23	1311	1334	1311	1334	0.88
15	16	0.012	2.2	10.0	0.4	3	23	1381	1401	1379	1401	0.93
16	16	0.0054	0.98	11.1	5.9	1	23	1407	1429	1407	1429	0.98

Sequence Information

Coding Sequence: ATGGACTTGACATCATCAGAACCAAATATTTCTAATACCAAAGAACCACCAATTAACCAAAGTAGCCGTAGCGATTCAGGTTTCCTATCCGCTACTAATAATACAACCTATCCGGATTCAGAAGAAAGAAATCATCAAGAAAGTGGCGATACTGACAATAGAAGCGATTGCAGTTCACCAGGCAGAAAATACTATTGTCCTATTTGTGAAACTATGCTTACTTCACAACACGAGTTTACTCTACATATCAGATCTCATAACAATGATTCCGATTCACAGTTCCAAGAAAAAGGATTCGTTTGCAggatttgttccaaaatattAAGTTCAAGTTCAAGCTTAGACCGACACGTTCTTGTACACAGTGGTGAAAGACcttttacatgtaaatattgTGGTGATACTTTTACAACGAATGGCAATATGCACAGACATATGAGAACCCATTCCTTTAAAAATGATTACGAATCGGATGGTAGCTCAGACAGTAGTAGTAGCAATTCCAAAAATGtagaatacaataataataaagtcgACAAGCACGAGAAACGTAAATTAGAATTATGTGAAGATTACAAAAGTTCACGTATTAAATTAGAAGAGGATGATAGTAATTGTGAAAAATACAAATGCCCAGTTTGCGGACGCGATGATTTCGCCACTAAATCAAATTTAGAAATACATCTGGAAGATAATCATCCGGATTATCCGGCAAAATGTCATGAATGtaacagtatttttaaaaataataaaattttaacgatACATAAAATTACCGTCCATGAAGACAATAGCAAAATCAAAAATTCAGTAATAGGTTTTAAAGATTTGACTTTCGTGGACTTTTCTAGTGAAAAATTTCCGCTTATTGCTAGACACGAGTGCgaaaaaaatttgcatagagCCTCTTCGggtttaaaatttcaatgtcAGAAATGTTCTAGAGCGTTTCCTTGCGCAAACTCTTTAGAAATTCATCAGAAGGAGTGCTGCGTTGGTTTAGACTTAAGTATTTGCAACGACAATTCCATGGATTTAACGAAACCTACTAAAGTGaatgaaaacgaaataaaacgTGCGGATTTCTTTTCACGACTGGATTTACAAGATAATTCTCCCGAAAAAAATCACACGACCACAAACAAATTTCAGCAAAAATTATTAGAGACTATGAAAAACATCGATAATAGCAAAGACTTGGCTGACATACAATCAATTATATCAATGACAACCAACGGTAGTTTCCTACAGCATTTGCAAACGAAAACTGATATGCCGAATCAATCAACGAATGACTTACAATCGGAGAAAACAGAAGAAGAAGAGGCACAAGATATTTTTGCGAAAGAGTTTCGAAAAATGAAACTTCGTGGAGAATTTCCTTGCCGTTTATGTAGTGCAGTTTTTCCTAATTTACGAGCTCTAAAAGGACATAATCGTGCACATTTAAATGGTAACACAAACGGAACGTACAGATGTAATATGTGTCCCCATTCCTCTGTAGATAAAGCTGCTTTAATTCGTCACATGCGCACTCATAACGGAGACAGACCTTATGAATGCAGTTTGTGCAATTATGCCTTCACAACTAAGGCAAACTGTGAAAGACATTTAAGAAACAGGCACGCTAAAACAACACGAGAGGAAGTcaaaaaatctataatttatcATCCGTCTGAAGATCCTACCAATGATGAAATGAACAAGTTAACAATTAGAGAtgatacaaagaaaattaattccaGTTTTAACTCAATAGAGTCCAGCGAATTAAGTCCCGAAAAGCTAAGAAGTTCCACGCCAAAAATATCTACAGATATATTCGCTAGTCATAGTGAAACCAATCCCTTAATTCCTATTTCGGCACAAATTCAAGCATGGCGAAATCCATACTTGGACAAATCACCAACGAAACCGCATCATAATATAAGTGATATAATTAAGAATGAGAATACAAAAACGTTTCAGGAGCACAGACATAAAAGCGAATTGccatacttacaaccgcaaATTAATTTCATGCCTAAGTCTGATAATGTCTCAACTCCACAAAAGAACGCACCaaaaatacatgtaaaaaatTTGGATTCGCTCATACAAGCACAGGAATATGACTATAGCGAGGATGAGAAATGTGAAAATTATGACGACGAACCAATAGATTTGAGTAAAAAGAAAACCCCTGACAGAGAAATGGAAAGCGATCGACGAGATGATGAAACTCCAGAAGATTTATcgaacaaaaattcaaatttatctcATTTCAATGTGAGTGAAATTTTAGCTCAACAACTGTTAATGAAGAGCGCTCCTAAAATAGACCATGCAAGTTTTTATGCTGCCCAGTTTGCATTATTACGAAACTCTTTCACTGGATGGTCACCTTTTTCCGGAATAAATCCGttacttttccaaaatattccaAGCACAGTTCTTCCCCAAGAACAAGAAGTAAAACGATTACAACGTCAACTCTGTGGGGGAAGAATGATAAACAGTCTTAGTGACAGACCATCGTTTCAAAATCTTAATAGTAATTCCatattgaacaattttaaaCCTCCAACTCAAGTTAAATCCGAAGAAATGACACCCTTAAGTTTGAGTGTCGATCCAGGATTTACCGAGGCCAGTTCTGTGTCTCAACCTAAACCTGATTTAATACAATCTCCTAATTCGGTTAAAATGGTAATTAAAAATGGAGTATTAATGCCAAAACAAAAGCAAAGGCGTTATAGAACAGAACGACCATTTTCATGCGAGCACTGTTCTGCTAGATTTACTTTGAGATCAAATATGGAAAGACACATTAAACAGCAACATCCCCAGTTTTGGTCACAAAGACAACGTTCGAATATAGGAAATACTGGAAGAAAAAATACTGGACTTGCTTCAAATTTGCAAATATCTAATTATGAGCAAGCAAAGAGTCAAGACTATGATGAGCATAAGGGAAATCACATATCTGATAAAATCAAATACGCCATATTAGCTCAACATTTAAGAACCAATCAAGAGTACAAAGGTGCACTAATTCCGAAGAAAGAAGATGACGACGAATGTGCTTTGGTAATCGatgaaaatgaatctaaaattGAAGGTACTAATGAGAATAAACGTATATATGACGAAAATGTTCAAGAAAGTTTAGAAAGTCATATGCCAAAATTGGATGCTTTACTTTCTAGTAAACCATCCAAACAAGATGAAACGCAAGATTTAGTATCTGTATCACGCTTACTAGATAATGCATCCCAGCAGCAGTTTGAGTACTTTAAAAGAGAAAGGGAAGACCAAGAAGGTGAAGGGGGAAGTGAGGAAGACGAAGAAGGTCTAGTAGCCAGTGGAAGTACAAGCGAAGCAAATTCTGGTACTGACGaaaataaATCGGAATCGGAAAATGTAACAAGCCAAGGACCAGTTAAAAAGAAGTCTGCGTATTCCTTAGCACCAAATAGAGTTAGTTGTCCGTATTGCAATAGAAAATTTCCTTGGACTTCATCATTACGCAGGCATATTCTCACCCACACAGGTCAGAAACCTTTCAAATGTAGTCATTGTCCACTGTTATTTACTACAAAGTCGAACTGCGATCGGCATCTACTTAGAAAGCATGGTAGTTCAGCTACAACTATTGCAAACGAAGgaagcaataataatacaaattatctCATGAGAAATGTACCAGAAAGGCCTTTTAAATGTTCTAATTGTCCTAGTAGCACATTCTCGACATATTCCAACCTGAAAAAGCACATGACTTGCAAGCATGGTTCACAAATGGACGATAAATCTCAAGGATATGAAGCTGGTAGCTCAGAGGATGAAAAGCAAAATCAACGAGAGCAAAAGGGTGATTGGGATATTCATATCCCAAGCAATAAAATGACTATTGAAAGCCAAAGTACTCAAACTAATTCGGATTTACCATTTAAATGCCACCTTTGCGAAGGCTCTTTTGCGGAAAGAAATGACTGCCTAGATCATATCAAAGATAAGCATCCTTCTGAATATGATCTATTAATGTCAAAAAATGCATTGGATAACAACGCATCGACTCCAGAGGAGTCAGCTAATCATGACGAGGACGAGAACGAAATCAGGGGGAAGTTTCCAGATTATTccaatagaaaagtaatttgCGCTTTCTGTATGCGAAGATTTTGGTCGGCAGAAGATCTAAGGAGGCACATGCGCACTCATACAGGTGAGAGGCCCTTTAGTTGCGACATATGTCGCAGAAGATTTACACTAAAACACAGTATGCTACGTCACCGTAAGAAACATAACGTTTCCTTTGAAAATGATAATCTCAACAGTGACGAAGACAATGTTAGTCCtagtttggaaaaattgaagaatAGTATGATGAAGATCTCCGACAAAACAGACGAATCCGATGGTAACGAAGGCAACGATTTGATCAGCAATTTATTAGGAATTCAAGACAGATCAATTATAGAACAAGTATTAACGGCTTCACCGGATGATGCAGCAAAATTATTGGGAGTCAAGAACGGTAATCAAGATTAG
Protein Sequence: MDLTSSEPNISNTKEPPINQSSRSDSGFLSATNNTTYPDSEERNHQESGDTDNRSDCSSPGRKYYCPICETMLTSQHEFTLHIRSHNNDSDSQFQEKGFVCRICSKILSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSFKNDYESDGSSDSSSSNSKNVEYNNNKVDKHEKRKLELCEDYKSSRIKLEEDDSNCEKYKCPVCGRDDFATKSNLEIHLEDNHPDYPAKCHECNSIFKNNKILTIHKITVHEDNSKIKNSVIGFKDLTFVDFSSEKFPLIARHECEKNLHRASSGLKFQCQKCSRAFPCANSLEIHQKECCVGLDLSICNDNSMDLTKPTKVNENEIKRADFFSRLDLQDNSPEKNHTTTNKFQQKLLETMKNIDNSKDLADIQSIISMTTNGSFLQHLQTKTDMPNQSTNDLQSEKTEEEEAQDIFAKEFRKMKLRGEFPCRLCSAVFPNLRALKGHNRAHLNGNTNGTYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDEMNKLTIRDDTKKINSSFNSIESSELSPEKLRSSTPKISTDIFASHSETNPLIPISAQIQAWRNPYLDKSPTKPHHNISDIIKNENTKTFQEHRHKSELPYLQPQINFMPKSDNVSTPQKNAPKIHVKNLDSLIQAQEYDYSEDEKCENYDDEPIDLSKKKTPDREMESDRRDDETPEDLSNKNSNLSHFNVSEILAQQLLMKSAPKIDHASFYAAQFALLRNSFTGWSPFSGINPLLFQNIPSTVLPQEQEVKRLQRQLCGGRMINSLSDRPSFQNLNSNSILNNFKPPTQVKSEEMTPLSLSVDPGFTEASSVSQPKPDLIQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNIGNTGRKNTGLASNLQISNYEQAKSQDYDEHKGNHISDKIKYAILAQHLRTNQEYKGALIPKKEDDDECALVIDENESKIEGTNENKRIYDENVQESLESHMPKLDALLSSKPSKQDETQDLVSVSRLLDNASQQQFEYFKREREDQEGEGGSEEDEEGLVASGSTSEANSGTDENKSESENVTSQGPVKKKSAYSLAPNRVSCPYCNRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGSSATTIANEGSNNNTNYLMRNVPERPFKCSNCPSSTFSTYSNLKKHMTCKHGSQMDDKSQGYEAGSSEDEKQNQREQKGDWDIHIPSNKMTIESQSTQTNSDLPFKCHLCEGSFAERNDCLDHIKDKHPSEYDLLMSKNALDNNASTPEESANHDEDENEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVSFENDNLNSDEDNVSPSLEKLKNSMMKISDKTDESDGNEGNDLISNLLGIQDRSIIEQVLTASPDDAAKLLGVKNGNQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627621;
90% Identity: iTF_00990565;
80% Identity: -