Basic Information

Insect: Trypoxylus dichotomus
Gene Symbol: RREB1
Assembly: GCA_014905495.1
Location: BNES01000024.1:6398863-6404980[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.8e-05 0.0042 17.9 1.4 1 23 64 86 64 86 0.98

2 16 0.00067 0.06 14.3 0.2 1 23 100 122 100 122 0.97

3 16 5.3e-06 0.00047 20.9 4.3 1 23 128 150 128 150 0.99

4 16 0.056 5 8.2 0.2 1 23 212 236 212 236 0.87

5 16 0.0055 0.49 11.4 2.9 2 23 242 264 242 264 0.97

6 16 0.093 8.3 7.5 0.8 1 21 311 331 311 332 0.95

7 16 0.071 6.3 7.9 0.1 1 23 463 485 463 485 0.96

8 16 6.1e-06 0.00055 20.7 0.7 1 23 494 516 494 516 0.99

9 16 0.00077 0.069 14.1 3.1 1 23 522 545 522 545 0.97

10 16 0.00066 0.059 14.3 2.8 1 23 903 926 903 926 0.96

11 16 0.00046 0.041 14.8 0.4 2 23 1143 1164 1142 1164 0.97

12 16 0.12 10 7.2 6.3 1 23 1170 1193 1170 1193 0.97

13 16 0.05 4.4 8.4 5.0 1 21 1221 1242 1221 1245 0.95

14 16 2.3 2.1e+02 3.1 3.6 1 23 1299 1322 1299 1322 0.93

15 16 0.016 1.4 10.0 0.4 3 23 1369 1389 1367 1389 0.93

16 16 0.007 0.62 11.1 5.9 1 23 1395 1417 1395 1417 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.8e-05	0.0042	17.9	1.4	1	23	64	86	64	86	0.98
2	16	0.00067	0.06	14.3	0.2	1	23	100	122	100	122	0.97
3	16	5.3e-06	0.00047	20.9	4.3	1	23	128	150	128	150	0.99
4	16	0.056	5	8.2	0.2	1	23	212	236	212	236	0.87
5	16	0.0055	0.49	11.4	2.9	2	23	242	264	242	264	0.97
6	16	0.093	8.3	7.5	0.8	1	21	311	331	311	332	0.95
7	16	0.071	6.3	7.9	0.1	1	23	463	485	463	485	0.96
8	16	6.1e-06	0.00055	20.7	0.7	1	23	494	516	494	516	0.99
9	16	0.00077	0.069	14.1	3.1	1	23	522	545	522	545	0.97
10	16	0.00066	0.059	14.3	2.8	1	23	903	926	903	926	0.96
11	16	0.00046	0.041	14.8	0.4	2	23	1143	1164	1142	1164	0.97
12	16	0.12	10	7.2	6.3	1	23	1170	1193	1170	1193	0.97
13	16	0.05	4.4	8.4	5.0	1	21	1221	1242	1221	1245	0.95
14	16	2.3	2.1e+02	3.1	3.6	1	23	1299	1322	1299	1322	0.93
15	16	0.016	1.4	10.0	0.4	3	23	1369	1389	1367	1389	0.93
16	16	0.007	0.62	11.1	5.9	1	23	1395	1417	1395	1417	0.98

Sequence Information

Coding Sequence: ATGGATGCGACAACCACCGAACCAAACATTAACCATACCAAAGAACCGTCAGCAAACCAAAGCAACAGAAGCGATTCCGGCTTTCTTTCCATCACCAATAATACCACCTATCCAGACTCCGAAGAGAGAACTCACCAAGAAAGCGGCGACACTGACAACAGAAGCGATTGCAGCTCCCCAGGACGGAAATATTATTGTCCGATTTGCGATACGATGTTAACGTCTCAACATGAATTCACCCTACATATTCGATCTCACAACAACGACGCGGCCGACTCACAATGTCAAGAAAAAGGTTTCGTATGTCGGATTTGCTCGAAAATATTGAGTTCGAGCTCTAGCCTAGATCGCCATGTACTTGTACACAGCGGCGAAAGACCTTTCACGTGTAAATATTGCGGCGATACGTTTACAACAAACGGAAATATGCATAGGCATATGCGGACGCACTCGTTTAAAAACGACTACGAGTCTGATGGCAGTACAGACAGCAGCAGTAGCAGTAGCAATTCTAAGAACGTAGAATACAACAATAACAAGGTCGATAGGCATGAGAAGCGAAAATTAACGCTATGCGAAGATTATAAACACTCCCGAATAAAGCTGGAGGAAGTCGATGCaagcaatgaaaaatataagtGCCCTGTTTGCGAACGCGATGATTTCACAAGCAAGTCGAGTTTGGAGGTACACCTGGAGGACAACCATCCAGATTTTCCAGCGAAATGTCACGAATGCAatagtatatttaaaaacaacaaaCTTTTAACAATGCATAAAATCACAATCCACGAAGAAAACAGCAAAATAAAGAGCTCAGTTGTTGGATTTAAAGATCTTACCTTTGTCGATTTTTCAAGCGAAAAATTTCCTCATATTGCCAGACACGAATGCGAGAAAAATCTCCACAAAGCATCTACAGGATTAAAGTTCCAATGTCAGAAATGTTCGCGGGCCTTTCCGTGTGCAAACTCGTTAGAGATTCACCAAAAGGAATGCTACGTTGGTTTAGATTTAAGTACCAGCAACGACAATTCTATGGACTTGTCGAAATCGGCAGTGTTGAACGAAAACGATATTAAACGAGCTGATTTCTTTTCGAGATTAGATCTACAAGACAATTCGCCCGAAAAAGACCACTTTGATCCAAccaaattgcaacaaaaactgTTGCAAACAATGAAAAGTATCGATAACAGTAAAGATTTAGCGGATATCCAATCGATCATATCTATGACAACCAACGGCAGTTTTTTACAGCACCTACAAACAAAACCCGATATACTCAATCAGACAACGAATGATATGCAGCTAGAGAAAACCGAAGAAGAAGAAGCTCAAGATATATTTGCGAAAGAATTTCGTAAAATGAAATTGCGTGGTGAATTTCCTTGTAGACTTTGCAGCGCGGTATTTCCAAATTTACGTGCACTCAAAGGCCATAACCGAGCTCACTTAAACGGTAACACCAATGGAACCTATAGATGTAATATGTGCCCTCACTCTTCCGTCGATAAAGCTGCTTTAATACGACATATGCGTACTCATAACGGTGACAGACCCTACGAATGTAGTCTTTGTAATTACGCTTTTACAACAAAAGCGAATTGCGAACGACATTTAAGGAATAGACACGCAAAAACTACACGAGAAGaagttaaaaaatcaataatttatcatcCCTCTGAAGATCCAACTAACGAcgacataaataaattggtagCTAGAGAAGATCGAAAAGTAAACTCCAGTTTTAATGCTAGCGAACCAAACGAAATTGCCGCCGAAAAAATGAGAAGCACTACTCCTAAGATGCATAGCGAAATATTTACTAATCGCGCCGAAACCAGTCCTTTAATTCCATTGTCTGCGCAGATTCCCGCCGCCTGGAGAAGCCAATATTTGGATAAGTCCCCAATAAAAGCCATGCaggataacaaattaaaaactgaTCTACCATATTTGCCGCCGCAAATCAACTTCATGCCGAAATCTGACAGTGTATCAACGCCGCAAAAACCAGTTGCGAAAATCCATGTAAAAAATTTGGATACTTTGAAAGATTTTGATTGCAGTGAAgacgaaaaatatgaaaattttgacGAAGATGAACCGATGGATCTAAGCAAAAAGAAAACTCCGGATATAGAAATGACGAGTGATCACAATACCGATGAATCCCCCGAggatttatcaaataaaaagcCAAATTTAGTTCGTTTTAACATGAACGAAATACTGGCACAGCAATTGTTGATAAAGAACACTCCCAAAATAGATCATACAAGCTTCTATGCTGCACAGTTTGCATTATTACGTAACTCATTCCCCGGATGGTCACCATTTTCTCCGATAAATCCTTTACTTTTTCAAAACATGCAGAACCCAATTATACCTCAAGAGCAAGAAGTTAAACGTTTGCAACAGTTATGTGGAGGTGGTATGATTAACAGTTTAAACGAAAGATCATCTTTCCAGGGATTAAATAGAAATCCAATTCTGAACAACTTTAACGTTcagaatcaaattaaatcagaaGAAATGCCGCCACTTACCTTAAACGTTGAACAGACGTTCCACGAAAATAATTCAGTACCGCAGTCTAAATCAGATCTACTACAATCGCCTAATTCGGTTAAAATGGTAATTAAAAATGGCGTTTTAATGCCTAAACAGAAACAAAGACGTTATCGTACAGAAAGACCCTTCTCATGCGAACATTGTTCGGCTCGGTTTACACTCAGATCCAACATGGAACGCCATATTAAGCAGCAACATCCGCAATATTGGTCACAAAGGCAACGTTCGAACATTGGTAGTAGCGGTAGGAAAAGCTCATCGCTAGCCGCAAATTTACACATTCCAAATTATGAGCAGCCAAAATCTCATCCGGAGTATGAAGAAAATAAGAGTAACAATCATATATCAGAGAAACTTAAGTACGCCATATTAGCTCAACATTTAAGAACCAATCAAGAGTACAAAAATTCAATACTAATGCCAAAGAAAGAAGACGACGATGAATGCAATCTAGTTATTGACGAAAACGATTCCAAAGCAGAACACTTAGAAGATAGAAAATCTACATTTGACGAAAATGTAGAAGTTTGCGAAGATCACATGCCTAAGTTAGACACTTTGTTATGCAATAAACCAAATAAACAGGATGAAACCCAAGACTTAGTATCAGTATCACGTCTTCTTGATAACGCTTCTCAACAACCATTCAAGGACTATTTTAAAAGGGATGGAGACGAACAAGATGGTGAGGGTGGAAGTGAAGAGGATGAAGAAGGTTTGGTAGCTAGTGGTAGTACAAGTGAGGCCAATTCCGGTACAGATGAAAATAAatCCGAATCAGAACATTTGACTAGTCAAGGTCCGGTGAAAAAGAAATCGGCATATTCGTTAGCACCAAATCGGGTCAGCTGTCCATACTGCAGTAGAAAGTTCCCTTGGACATCTTCACTACGAAGACATATTCTAACTCACACCGGCCAAAAACCGTTCAAATGCAGCCATTGCCCATTACTTTTTACCACCAAATCAAACTGTGACCGACATCTACTTCGAAAGCATGGTAGCTCTGCAACCACCATCGCAAACGAGTCCGGAAGCAATAACGCAAACTATTTAATGCGAAATGTTCCCGAAAGACCATTCAAATGTTCAAATTGCCCCAGCAGCACATTTTCGACATATTCCAATTTGAAAAAGCATATGAACTGCAAGCACGGCTCGCAGTCAGATGACAAAGCTCAAGGTTACGAAGCGGGTAGTTCAgaagatgaaaaacaaaatttgcaaGATCAGAGTTGCGACTGGAATACTGCCGTTACCACGAATAAGTTGCCAACGGAAAATCAAGGCGTACAGAGCAATTCCGATCTTCCATTTAAGTGTCATCTTTGTGAAGGATCATTTTCCGAAAGAAATGACTGTTTAGATCATATTAGGGACAAACACCCTTCCGAATACGATCTTTTGATGTCGAAAAATGCGCTGGATAACAATACTTCAACGCCGGAGGAATCCACTAATCACGACGAAGATGAAAACGAAGCACGCGGGAAATTTCCGGATTATTCGAATAGGAAAGTGATTTGCGCGTTTTGCATGAGGCGATTTTGGTCCGCCGAAGATCTAAGAAGGCATATGCGAACGCATACGGGCGAAAGACCATTCAGTTGCGACATCTGTCGCAGGCGATTCACCCTGAAACACAGCATGTTACGACATCGCAAGAAGCACAACTTGGCTTACGAAAATGAAAACCTAAATAGTGACGAAGACAACGGTAGTCCTACCTTAGGTAAAGTGAAGACGGGCGTGGTAAAAAATGCGGATAAAACTGACGAATCGGACGGGAACGAAGGAAACGATCTAatcagtaatttgttgggaatCCAGGATAGATCGATAATCGAGCAAGTTTTAACGGCGTCTCCAGATGACGCTGCAAAATTGTTAGGAGTAAAGAATGGAAATCAGGACTAG
Protein Sequence: MDATTTEPNINHTKEPSANQSNRSDSGFLSITNNTTYPDSEERTHQESGDTDNRSDCSSPGRKYYCPICDTMLTSQHEFTLHIRSHNNDAADSQCQEKGFVCRICSKILSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHSFKNDYESDGSTDSSSSSSNSKNVEYNNNKVDRHEKRKLTLCEDYKHSRIKLEEVDASNEKYKCPVCERDDFTSKSSLEVHLEDNHPDFPAKCHECNSIFKNNKLLTMHKITIHEENSKIKSSVVGFKDLTFVDFSSEKFPHIARHECEKNLHKASTGLKFQCQKCSRAFPCANSLEIHQKECYVGLDLSTSNDNSMDLSKSAVLNENDIKRADFFSRLDLQDNSPEKDHFDPTKLQQKLLQTMKSIDNSKDLADIQSIISMTTNGSFLQHLQTKPDILNQTTNDMQLEKTEEEEAQDIFAKEFRKMKLRGEFPCRLCSAVFPNLRALKGHNRAHLNGNTNGTYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKSIIYHPSEDPTNDDINKLVAREDRKVNSSFNASEPNEIAAEKMRSTTPKMHSEIFTNRAETSPLIPLSAQIPAAWRSQYLDKSPIKAMQDNKLKTDLPYLPPQINFMPKSDSVSTPQKPVAKIHVKNLDTLKDFDCSEDEKYENFDEDEPMDLSKKKTPDIEMTSDHNTDESPEDLSNKKPNLVRFNMNEILAQQLLIKNTPKIDHTSFYAAQFALLRNSFPGWSPFSPINPLLFQNMQNPIIPQEQEVKRLQQLCGGGMINSLNERSSFQGLNRNPILNNFNVQNQIKSEEMPPLTLNVEQTFHENNSVPQSKSDLLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNIGSSGRKSSSLAANLHIPNYEQPKSHPEYEENKSNNHISEKLKYAILAQHLRTNQEYKNSILMPKKEDDDECNLVIDENDSKAEHLEDRKSTFDENVEVCEDHMPKLDTLLCNKPNKQDETQDLVSVSRLLDNASQQPFKDYFKRDGDEQDGEGGSEEDEEGLVASGSTSEANSGTDENKSESEHLTSQGPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGSSATTIANESGSNNANYLMRNVPERPFKCSNCPSSTFSTYSNLKKHMNCKHGSQSDDKAQGYEAGSSEDEKQNLQDQSCDWNTAVTTNKLPTENQGVQSNSDLPFKCHLCEGSFSERNDCLDHIRDKHPSEYDLLMSKNALDNNTSTPEESTNHDEDENEARGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNLAYENENLNSDEDNGSPTLGKVKTGVVKNADKTDESDGNEGNDLISNLLGIQDRSIIEQVLTASPDDAAKLLGVKNGNQD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627621;
90% Identity: iTF_00627621;
80% Identity: -