Dsub009296.1
Basic Information
- Insect
- Drosophila subsilvestris
- Gene Symbol
- sip1
- Assembly
- GCA_035043285.1
- Location
- JAWNNB010001726.1:1214448-1217084[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-92 2.4e-88 296.4 12.2 4 275 414 680 411 680 0.98 2 2 0.16 1.5e+03 -1.4 0.0 157 198 692 730 685 735 0.61
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAACGCTTTGAGATCACCGACTACGATCTGGACAATGAGTTCAATACGAACAGACCGCGCGCGCGGCACAGCAAGCATCAGCAGATCTACGGTATTTGGGCGGACGACAGTGACGAGGAGAGCCCCGGCGATGGTGGCGGCCAGAAGCGTCATGGCCGCCAGGCAAAGGATTACACAATGCCCGTGAATTTCGTGGCCGGCGGCATTCAGCAGGCgggcaaaaagaagaaaaaaccgCTAAAGGGCGAAGAAAAAGCCGGCAAAGAGGAGGCAGGCGACGGCGACGAAGAGGCCGAAAAGAGTGACGACTCGCAGGAGGAAAGTGGGCGCCCTGCCTTTGGGCAAAGCGATCCCAGTTCGAACAGCtccgaggaggaggtggaaCGACCCGCAATGAGAAGCAGCCAAGCGAAACCCTCGACGTTGTTCAAGCATCAATCGCACATCGCTGGCACTCGCAACGTGGGCACCTGGGAGCAGCACACGCGCGGCATTGGCGCCAAGCTCCTGCTGCAGATGGGCTACGAGCCTGGCAAGGGTCTGGGCAAGGATCTCCAGGGCATATCGCAGCCGGTGCAGGCGCACGTGCGCAAGGGACGCGGCGCCATTGGCGCCTACGGCCCTGAGACGGCCGCAAGCATTGGGGGCAAGGCGCAGGCCATCAAAGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAAATGAACAAGTGGCGCAAGGGAGGCGTGGCCGAGCACCAGGAGAAGGCCGGCAAGCGGTACTACTACAAATCCGTGGAGGAGGTGATAGCCAAGGGCAAGAAATCCACGCATCTGCTCTCCGAGAAGCTGAGCAAGCAATTGGGCAACGTGCCCGTCATCGATATGACGGGGCCGGAGAAGCGCGTTCTCAGTGGCTACCATGCTTTGGCGCAAACGAAAATCACACCCGAGGAGACGCTCTACGACGCGGAGGCGGGTGGCGCATCCGTGCCGGTCTTTGCCATGCCCGAACTGACGCACaatctgcagctgctggtgaGCCAATGCGAGCAGCAGATCATTGCCATTGACAAATCGGAGCGCGAGTCCGAGAGCCAGCAGGCGGCGCTGCAGTGTGAGTACAAGAAGCTCGAGGAGATTGTCCAGCTGGAGCGGAATCACATCAGCACGCTCGAAGAGGTGCTCGATCGTGTGGAGCGGCTGAGCGAGGATCCCGAAATTACGCTGCATGCCGCGGAGAAGCTGTTCCTGCAGCTTCTAGAGGACTTTGCCGCCGAGTTCAAGGAATTTGGACTGGCAGATCTGGCCGCGGGCGTCATTGCGCCGCTGGTGAAGCGAGAGCTTGTGGCCTGGCAGCCCCTGGAGGAGCCCACACAGCCGCTGCAGCTGATCAAAAAGTGGCGCGGAATGCTGCAGCGCGAGGAGCCCGCCGGACAGCAGCCACGCAATGTCTTCGATCCGTATTCCTCGCTCATTTGGGCGGGCGTTATGCCCTCGTTCCGGGCCTGCGCTGCCGTCTGGCAGCCCAAGGAGCATTCGCCAATGGCCGCGCTGCTGGACGCCTGGGCGCCGCTGCTGCCCACATGGGTGCTGGACTCTGTGCTCGAGCAGCTGGTGCTGCCGCGTCTTGTCACGGGCGTCTACGATTGGGATCCCCTCACCGACACGGTGCCCATACACAGTTGGGTGCTGCCCTGGCACGGCATACTGGGCAGCAAGCTGGAGGAGTCCGTGTACCCGCAGATACGCAGCAAATTGGGCGTGGCCCTGCAGGCGTGGTCGCCGCAAGATCGCTCCGCGCGGGCCATGCTAACACCTTGGGCCAAGGCCTTTCCGGAGGAGGAAATGGTGGACTTTCTGCAGCATCACATCACGCCCAAGCTGCAGGGCGTACTCTCGGCGTTCATCATCAATCCGCTGCATCAGGACCTGGAGCAATGGAACCAGGTGTGGGAGTGGCACGAGCTCATACCGCCGATGCACATGGCCAAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATGTGGCTGAACCAATCGCCCGACTATGCGGAAATCTCCCGCTGGTACACCGGCTGGAAGGGCATGCTGAATGAGCCGCTGCTGCGCGAGCCCAGCGTCAAGGAGCATCTGCGTCGTGCCCTCGACATGATGCATCGGGCAAGCGATGCCCTGCTGCAGCCCACAGCAGCGCCGCCACCGCCCACACCGCCTGCACCGCCTTCGGTGGCGGGTCTGCTGCCGCCACTCATGATGATGGATGTGGCACCGCCCACGCAGCTGGAGTTCAAGGAGTTGGTCTCGCAGAAGTGTGCGGAGCTGGGCATTATTTTTGCCCCACTGCCAGGCCGCCGGGAAATGGGCAAGCAGaTTTATCGCGTGGGCAAACTCTTTTGCTACATCGATCGCAATGTTTGCATGCTGAGCGATAGCTCATTTAGCAATTGGCAGCCAGTGGCGCTCAATCATCTGCTGGAACGCACACAGGCGGGTTTGTTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNTNRPRARHSKHQQIYGIWADDSDEESPGDGGGQKRHGRQAKDYTMPVNFVAGGIQQAGKKKKKPLKGEEKAGKEEAGDGDEEAEKSDDSQEESGRPAFGQSDPSSNSSEEEVERPAMRSSQAKPSTLFKHQSHIAGTRNVGTWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKAQAIKVDEDVREAKEFKEQMNKWRKGGVAEHQEKAGKRYYYKSVEEVIAKGKKSTHLLSEKLSKQLGNVPVIDMTGPEKRVLSGYHALAQTKITPEETLYDAEAGGASVPVFAMPELTHNLQLLVSQCEQQIIAIDKSERESESQQAALQCEYKKLEEIVQLERNHISTLEEVLDRVERLSEDPEITLHAAEKLFLQLLEDFAAEFKEFGLADLAAGVIAPLVKRELVAWQPLEEPTQPLQLIKKWRGMLQREEPAGQQPRNVFDPYSSLIWAGVMPSFRACAAVWQPKEHSPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVYDWDPLTDTVPIHSWVLPWHGILGSKLEESVYPQIRSKLGVALQAWSPQDRSARAMLTPWAKAFPEEEMVDFLQHHITPKLQGVLSAFIINPLHQDLEQWNQVWEWHELIPPMHMAKLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYTGWKGMLNEPLLREPSVKEHLRRALDMMHRASDALLQPTAAPPPPTPPAPPSVAGLLPPLMMMDVAPPTQLEFKELVSQKCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDSSFSNWQPVALNHLLERTQAGLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487285;
- 90% Identity
- iTF_00517697; iTF_00473765; iTF_00484429; iTF_00480848; iTF_00471602; iTF_00514875; iTF_00611339; iTF_00563896; iTF_00474489; iTF_00580717; iTF_00574799; iTF_00536032; iTF_00601042; iTF_00487285;
- 80% Identity
- -