Dbif002067.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- sip1
- Assembly
- GCA_009664405.1
- Location
- CM019042.1:41118374-41121040[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-94 5.9e-90 301.3 11.7 4 275 393 659 390 659 0.98 2 2 0.22 1.6e+03 -1.9 0.0 158 195 672 706 664 718 0.60
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAACGCTTCGAGATCACCGACTACGATCTGGACAATGAGTTCAATGCGAACAGACCACGCGGGCGGCACAGCAAGCATCAGCAGATCTATGGCATTTGGGCGGACGACAGCGACGAGGAGAGCCCCGGCGATGGCGGTGGCAAGAAGCGGCATGGCCGCCAGGCAAAGGACTACACAATGCCGGTGAATTTTGTGGCCGGCGGCATACAGCAGGCGGGCAAAAAGCCGAAAAAGCCGCTCAAGGGTGCCGCCGATGACAAAGCCGGCAAAGAGGAGGCCGGCGGCGACGCCGAAGAAGCCGAAAAGAGCGACGACTCGGGCGACACTGGGCGTCCAGCCTTTGGGCAGAGCGATCCCAGTTCAAACAGCtccgaagaggaggaggagcagcgacCCGCAAtgaggagtagcagcagccaagcGAAGCAGCCGACGCTCTTCAAGCATCACTCGCATATTGCGGGCACTCGCAATGTGGGCGCCTGGGAGCAGCACACGCGCGGCATTGGCGccaaactgctgctgcagatggGCTACGAACCGGGCAAGGGCCTCGGCAAGGATCTGCAGGGCATATCGCAGCCGGTGCAGGCACATGTGCGCAAGGGACGCGGCGCCATTGGCGCCTATGGCCCAGAGACCGCAGCCAGCATTGGCGGCAAGGCGCAGGCCATCAAGGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAGATGAACAAATGGCGCAAAGGGAGGCCCAAGGGGAAGAAGTCAACGCACCTGCTCTCCGAGAAGCTCAGCAAGCAATTGGGCAATGTGCCCGTCATCGATATGACGGGGCCCGAGAAGCGTGTCCTCAGTGGCTATCATGCGCTGGGGCAAACGAAAATCACACCCGAGGAGACGCTCTACGATGCGGAGGCGCCACCGGTCTTTGCCATGCCCGAACTGACGCACAATCTGCAGCTGCTGGTTAGCCAATGCGAGCAGCAGATCATTGCCATTGACAAGTCGGAGCGCGAGTCCGAGAGCCAGCAGGCGGCGCTGCAATGCGAGTACAAGAAGCTCGAGGAGATTGTCCAGCTGGAGCGGAATCACATCAGCACGCTCGAGGAGGTCCTGGATCGTGTGGAGCGGCTGAGCGAGGATCCCGAAATCACACTGGGTGCCGCGGAGAAGCTCTTCCTGCAGCTGCTCGAGGACTTTGCGGCCGAGTTTAAGGAATTTGGACTGGCGGATCTGGCCGCCGGTGTCATTGCGCCGCTGGTGAAGCGAGAACTGGTGACCTGGCAGCCCCTGGAGGAGCCCACACAGCCGCTGCAGCTGATCAAAAAGTGGCGCGGAATGCTGCAGCGCGAGGAGCCCGCGGGCCAACAGCCACGCAATGTCTTTGATCCCTACTCATCGCTCATTTGGGCAGGGGTGATGCCCTCGTTTCGCGCCTGTGCCGCTGTCTGGCAGCCCAAGGAGCATTCGCCAATGGCCGCGCTGCTGGATGCCTGGGCGCCGCTGCTGCCCACCTGGGTGCTGGACTCTGTGCTCGAACAGCTGGTGCTGCCGCGTCTCGTCACGGGCGTCTACGATTGGGATCCCCTCACCGACACGGTGCCCATACACAGTTGGGTGCTGCCCTGGCACGCGATTCTGGGCAGCAAGCTGGAGGAGTCTGTGTACCCGCAGATACGCAGCAAATTGGGCGTCGCCCTGCAGGCGTGGTCGCCGCAAGATCGCTCCGCGAGGGCCATGCTAACGCCCTGGGCCAAGGCCTTTCCCGAGGAGGAAATGGTGGACTTTCTGCAGCATCACATCACGCCCAAGCTGCAGGGCGTACTCTCGGAGTTCATTATCAATCCGCTGCATCAGGATCTGGAGCCATGGAACCAGGTGTGGGAGTGGCACGAGCTCATACCGCCCATGCACATGGCCAAGCTGCTGGACAAGCATTTCTTTCCGCGCTGGATGCAGGTGCTCGTCATGTGGCTAAATCAATCGCCGGACTATGCGGAAATCTCACGCTGGTACACCGGCTGGAAGGGCATGCTGAATGAGCCGCTGCTGCGGGAGCCCAGCGTCAAGGAGCATCTGCGGCGTGCCCTCGAGATGATGCATCGGGCGAGCGATGCCCTGCTGCAGCCCGCCACAGCGGCACCGCCACCGCCCACACCGCCCGCACCGCCGTCGGTGGCGGGTCTGCTGCCGCCGCTCATGATGATGGATGTGGCACCGCCCACGCAGCTGGAGTTCAAGGAGTTGGTCTCTCAGAAATGTGCGGAGCTGGGCATCATTTTTGCTCCGCTGCCCGGCCGCAGGGAAATGGGCAAGCAGATTTATCGCGTGGGCAAACTCTTTTGCTACATCGATCGAAATGTTTGCATGCTGAGCGATAGCTCCTTTAGCAATTGGCAGCCAGTGGCGCTCAATCATCTGCTGGAACGCACACAGTCGGGCGTATTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNANRPRGRHSKHQQIYGIWADDSDEESPGDGGGKKRHGRQAKDYTMPVNFVAGGIQQAGKKPKKPLKGAADDKAGKEEAGGDAEEAEKSDDSGDTGRPAFGQSDPSSNSSEEEEEQRPAMRSSSSQAKQPTLFKHHSHIAGTRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKAQAIKVDEDVREAKEFKEQMNKWRKGRPKGKKSTHLLSEKLSKQLGNVPVIDMTGPEKRVLSGYHALGQTKITPEETLYDAEAPPVFAMPELTHNLQLLVSQCEQQIIAIDKSERESESQQAALQCEYKKLEEIVQLERNHISTLEEVLDRVERLSEDPEITLGAAEKLFLQLLEDFAAEFKEFGLADLAAGVIAPLVKRELVTWQPLEEPTQPLQLIKKWRGMLQREEPAGQQPRNVFDPYSSLIWAGVMPSFRACAAVWQPKEHSPMAALLDAWAPLLPTWVLDSVLEQLVLPRLVTGVYDWDPLTDTVPIHSWVLPWHAILGSKLEESVYPQIRSKLGVALQAWSPQDRSARAMLTPWAKAFPEEEMVDFLQHHITPKLQGVLSEFIINPLHQDLEPWNQVWEWHELIPPMHMAKLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYTGWKGMLNEPLLREPSVKEHLRRALEMMHRASDALLQPATAAPPPPTPPAPPSVAGLLPPLMMMDVAPPTQLEFKELVSQKCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDSSFSNWQPVALNHLLERTQSGVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603334; iTF_00473765; iTF_00484429; iTF_00580717; iTF_00574799; iTF_00480848; iTF_00471602; iTF_00601042; iTF_00514875; iTF_00536032; iTF_00517697; iTF_00611339; iTF_00563896; iTF_00474489;
- 90% Identity
- iTF_00603334;
- 80% Identity
- -