Dath000865.1
Basic Information
- Insect
- Drosophila athabasca
- Gene Symbol
- sip1
- Assembly
- GCA_008121215.1
- Location
- CM017794.1:50345699-50348711[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-93 1.6e-89 299.9 12.7 2 275 407 675 406 675 0.98 2 2 0.15 1.1e+03 -1.3 0.0 157 197 687 724 680 730 0.62
Sequence Information
- Coding Sequence
- ATGTCGGACAACGAGTACGAGCGCTTTGAGATCACCGACTACGATTTGGACAATGAGTTCAACACAAACAGACCCCGGGGGCGCCACAGCAAGCATCAGCAGATCTATGGCATTTGGGCGGACGACAGTGACGAGGAGAGTCCCGGGGATGGGGGCGGCAAGAAGCGTCATGGCCGCCAGGCGAAGGACTACACAATGCCCGTGAATTTTGTGGCAGGCGGCATCCAGCAGGCgggcaaaaagaagaaaaagccACTGAAGGGTGAGGAAAAGGCCGGTAAAGAGGACGCAGGCGATGCAGAAGAAGTCGAAAAGAGCGATGATTCGGGAGAGAGTGGACGGCCTGCCTTTGGGCAGAGCGATCCAAGCTCCAATAGctccgaggaggaggagagaccCACAATGAGGAGCACGCAAGCGAAAGCCCCGTTCAAGCATCACTCGCACATCGCGGGCACGCGGAATGTGGGCGCCTGGGAGCAGCACACACGCGGCATTGGCGCCAAACTCCTTCTGCAGATGGGTTACGAGCCCGGCAAGGGTCTGGGCAAGGATCTGCAGGGCATTTCGCAGCCGGTTCAAGCGCACGTGCGCAAAGGACGCGGTGCCATTGGCGCCTATGGCCCCGAGACAGCCGCCAGCATCGGAGGCAAAGCGCAGGCCATCAAAGTGGACGAGGATGTGCGCGAGGCCAAGGAGTTCAAGGAGCAGATGAACAAGTGGCGCAAGGGCGGCGTGGCCGAGCCCCAGGAGAAGGCCGGCAAGCGCTACTACTACAAATCCGTGGAGGAGGTGATTGCCAAGGGCAAGAAGTCGACGCACCTGCTCTCCGAGAAGCTTAGCAAGCAACTGGGTAACGTGCCAGTGATTGACATGACGGGCCCAGAGAAACGGGTGCTCAGTGGCTACCATGCCCTTGGGCAATCGAAAATCACCCCCGAGGAGACCCTCTACGATGCGGAGGCGGGTGGCGCCCCTGTTGCGGTGTTTGCCATGCCCGAACTGACGCACAAcctgcagctgctggtgaGCCAATGCGAGCAGCAGATCATTGCCATTGACAAGTCGGAACGCGAGTCCGAGAGCCAGCAGACGGCGCTCCAGTGCGAGTACAAGAAGCTCGAGGAAATCGTCCAACTGGAGCGGAATCACATCAGCACGCTCGAGAAGGTGCTCGAGCGAGTGGAGCGGCTGAGCGAGGATCCCGAAATCACACTCCAGGCGGCGGAGAAGCtgttcctgcagctgctcgaGGACTATGCCGCCGAGTTCAAGGAATTCGGTCTGGCCGACCTGGCAGCGGGCGTCATTGCGCCGCTGGTGAAGCGAGAGCTGGTGTCCTGGCAGCCCTTGGAGGAGCCCACGCAGCCGCTGCAGCTAATCAAAAAGTGGCGAGGGATGCTGCAACGCGAGGAGCCCGCCGGGCAGCAGCCGCGCAATGTGTTCGATCCGTATTCCTCGCTGATTTGGGCGGGTGTGATGCCCTCCTTCCGGGCCTGCGCCGCCGTCTGGCAGCCCAAGGAGCATCCGCCAATGGCCGCTTTGCTGGATGCCTGGGCACCGCTGCTGCCCACGTGGGTGCTGGATTCGGTGCTCGAGCAACTGGTGCTGCCGCGTCTGGCCTCTGGCGTCTACGATTGGGATCCCCTCACCGACACGGTGCCCATCCATAGCTGGGTCCTGCCGTGGCACGCGATCCTTGGCAGCAAACTGGAGGAGTCTGTGTACCCGCAGATTCGCAGCAAATTGGGCGTGGCCCTGCAGGCCTGGTCGCCGCAAGATCGCTCCGCGCGGGCCATGCTCACGCCTTGGGCCAAGGCCTTTCCGGAGGAGGAAATGGTGGACTTTCTGCAGCATCACATCACCCCGAAGCTGCAGGGCGTGCTCTCGGAGTTCATCATCAATCCGCTGCATCAGGACCTCGAGCCGTGGAACCAGGTGTGGGAGTGGCACGAGCTCATTCCGCCTATGCACATGGCCAAGCTGCTGGACAAGCACTTCTTTCCGCGCTGGATGCAGGTCCTCGTCATGTGGCTGAACCAGTCGCCCGACTATGCGGAAATCTCGCGCTGGTATACGGGCTGGAAGAGCATGCTGAATGAGCCACTGCTGCGAGAGCCCAGCGTCAAGGAGCATCTGCGTCGTGCCCTCGAGATGATGCACAGAGCCAGCGATGCCCTGCTGCAGCCCACGGCAGCGCCGCCACCGCCCACACCGCCCGCACCGCCCACTGTGGCGGGTCTTCTGCCACCACTCATGATGATGGATGTGGCACCGCCCACGCAGCTGGAGTTCAAGGAGTTGGTCTCTCAGAAATGCGCCGAATTGGGCATCATCTTTGCCCCCCTGCCAGGCAGaagggaaatgggaaaacagATCTATCGCGTGGGCAAACTCTTTTGCTACATCGATCGAAACGTGTGTATGCTGAGCGATAGCTCGTTTAGCAATTGGCAGCCGGTGGCCCTCAATCATCTCCTGGAACGCACACAAACGGGAATTTTCTAG
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNTNRPRGRHSKHQQIYGIWADDSDEESPGDGGGKKRHGRQAKDYTMPVNFVAGGIQQAGKKKKKPLKGEEKAGKEDAGDAEEVEKSDDSGESGRPAFGQSDPSSNSSEEEERPTMRSTQAKAPFKHHSHIAGTRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASIGGKAQAIKVDEDVREAKEFKEQMNKWRKGGVAEPQEKAGKRYYYKSVEEVIAKGKKSTHLLSEKLSKQLGNVPVIDMTGPEKRVLSGYHALGQSKITPEETLYDAEAGGAPVAVFAMPELTHNLQLLVSQCEQQIIAIDKSERESESQQTALQCEYKKLEEIVQLERNHISTLEKVLERVERLSEDPEITLQAAEKLFLQLLEDYAAEFKEFGLADLAAGVIAPLVKRELVSWQPLEEPTQPLQLIKKWRGMLQREEPAGQQPRNVFDPYSSLIWAGVMPSFRACAAVWQPKEHPPMAALLDAWAPLLPTWVLDSVLEQLVLPRLASGVYDWDPLTDTVPIHSWVLPWHAILGSKLEESVYPQIRSKLGVALQAWSPQDRSARAMLTPWAKAFPEEEMVDFLQHHITPKLQGVLSEFIINPLHQDLEPWNQVWEWHELIPPMHMAKLLDKHFFPRWMQVLVMWLNQSPDYAEISRWYTGWKSMLNEPLLREPSVKEHLRRALEMMHRASDALLQPTAAPPPPTPPAPPTVAGLLPPLMMMDVAPPTQLEFKELVSQKCAELGIIFAPLPGRREMGKQIYRVGKLFCYIDRNVCMLSDSSFSNWQPVALNHLLERTQTGIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00487285;
- 90% Identity
- iTF_00603334;
- 80% Identity
- -