Basic Information

Insect: Drosophila oshimai
Gene Symbol: fru
Assembly: GCA_018150695.1
Location: JAECWM010000002.1:1443528-1445531[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.8e-12 9.5e-09 34.8 0.1 1 44 377 420 377 421 0.91

2 2 6.7 1.7e+04 -4.4 1.1 4 18 519 532 519 534 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.8e-12	9.5e-09	34.8	0.1	1	44	377	420	377	421	0.91
2	2	6.7	1.7e+04	-4.4	1.1	4	18	519	532	519	534	0.77

Sequence Information

Coding Sequence: ATGGGAGGCCCCACGGCCCCGACGGTGGCCAGCAGTGGCGAGGTGGGCCAGACGTACTGCCTCCGGTGGAACAACCACCAGACAAACCTGGTACAGATCCTCCATGCCCTGCACGAGGTGGGCAGCTACGTGGACTGCAGCTTGGTGGTGGACGACGAGCAGTTCCAGGCGCATCGCGTGGTCCTTGCGGCCAATTCACCCTATTTCCAACACATCCTGAAGGATGTGCCCCAGGACCACTGCAGCATTATCCTGCCGGGAGTCAAGGGCTTCGAGATAGCCGCTCTGCTGCAGTACATGTACACGGGCGAGACGACGGTGACCAAGAGCCAGGAGCCGGAGATCCTGCGCACGGCCAAGGAGCTGCAGGTCAAAGGTCTCTACGACAACCTCATGAAGTACAACCACCACAGCTCCAGTTCCAGTGGCCAGGCCAGCGTCACGCCCACCTCCAGCTCGGGAGCTGCAGTGCGGGAGCCCCAGAATGGCCACTCCTCGTCCGTGATCTCCACATCCACCCACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGCTCGCCACCACCACCGCCGCAGTTTGGCTACCAGCCGGCCTTCAGCCACTATCCCCAGCAGCTGCCCGGAAGTCAAATCCCAGCGGGAGAGGCTCCCCTGACCCCCACCCAGACGACCTCCCACTCAGCGCCCTCTGGAGCACCAGAAACGGGCGGACAGTGGCCACTGACACCCTCCGCCGCCGCTGCCATGCTGAACTCCGTCTACGAATCCGCCGCTGACATGAATCCCCTCAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCTCCGGAAATCGCGACACACCCATCCTGAGAAATGTTCTGGCCCAGGCTAATCCCGCCGACTCCTCGCAGCCCGGTCCTGGACTAATCATCAATGGTGAGAAGACCCCCACGCATCCCCACCAGAACCCGCAGCTTCCTGGTGGCCTGGGAGTGAGTGGTGGCGAACGCAACCACAGCTTCAATGGCTCCGACTATGGTGGCGACAAGGAGCCCCTGTCTCCCTACACAGATCGCTCTTTCGAAGAGGAGAGTGGTCAGTCGGGTGGGAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACCCGGGCGGACATGATGTGCGCCATCCAGGCGGTGAGGGAGGGCATGAGTGCCCTGCAGGCGAGCAGGAAGTACGGCCTGCCCAGTCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGCCGTGGCACCCATCGCACTCCCAAGCGGAGTCCTCCGGGTGCGGAGGCCTCGCAGGGATTCCCCTACTCCGCTGCTGCAGCGGCGGCTGCTGCCCACAACTACGGCCATGGTGGACATGGTGGCCATCACTCGGAGGTTAAACGGGATCCAAAGGTGGACCATGTGCCCGCCCATCACGGTATGCCGCCCACCATTCCTCCCTCGGCGGCCGCTCTGCTGGATCACGCCTTCCTGCAGCAGGCTCTGGAGAACCGCGGTGGTGACATGGCCGGTCGGGAGGCACTCCATGCCATGGCTTTGGCTGCTGCCGCCCATGCAGCTGCCAATCGCATGTCCAGCAGTCCGGCGGAGACGGACCAGCGCTCCAATGGCCATGGAATGCGATCCCCCAGTCCGCAGGGTCGTCACTACTCACACGACCAGGAGGCCATGGACCTGGAGATGGAGAAGCACGAGCAGGCCCTGATCAAGAGGGAGCGTGACCAGGACGAGCGTGAGGATGCGGACGACGAGGAGGACCACGAGCAGGAGCATGTGGAGGATCTCTCGCTGGCCAGGAAGGAGCGTCGTCCCCCCTCACCCTACTCCCCACAGCCAGTCGAGGCAGCCGGGGTGATCATGCACGCCGGCAGTGCCTCATCCAATGGCAAAGAGCTCGAGGATTACCACCCAGGCTCACCACAGTTCCTGAAGCGAGAACTACTGGAAAGCGAGGAGGCCCAGGCTCAGGCTCGGGCCGACTGA
Protein Sequence: MGGPTAPTVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKYNHHSSSSSGQASVTPTSSSGAAVREPQNGHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPAFSHYPQQLPGSQIPAGEAPLTPTQTTSHSAPSGAPETGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPGLIINGEKTPTHPHQNPQLPGGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEESGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAEASQGFPYSAAAAAAAAHNYGHGGHGGHHSEVKRDPKVDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSSSPAETDQRSNGHGMRSPSPQGRHYSHDQEAMDLEMEKHEQALIKRERDQDEREDADDEEDHEQEHVEDLSLARKERRPPSPYSPQPVEAAGVIMHAGSASSNGKELEDYHPGSPQFLKRELLESEEAQAQARAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00590167;
90% Identity: iTF_00539586;
80% Identity: iTF_00565460;