Dfic002972.1
Basic Information
- Insect
- Drosophila ficusphila
- Gene Symbol
- fru
- Assembly
- GCA_018152265.1
- Location
- JAECXK010000407.1:216097-218133[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-12 8.9e-09 34.8 0.1 1 44 384 427 384 428 0.91
Sequence Information
- Coding Sequence
- ATGGGCGGCCCCACGGCGCCGGTGGCCAGCAGCGGCGAGGTGGGTCAAACGTACTGCCTGCGCTGGAACAACCACCAGACGAATCTGGTCCAGATCCTGCACGCCCTCCACGAGGTGGGCAGCTATGTGGACTGCAGTCTGGTGGTGGATGATGAGCAGTTCCAGGCACATCGCGTTGTCCTGGCAGCCAATTCGCCATATTTCCAGCACATCCTCAAGGATGTGCCGCAGGACCACTGCAGCATTATATTGCCGGGTGTGAAGGGATTCGAGATTGCCGCCTTGCTGCAGTACATGTACACCGGTGAGACGACGGTCACCAAGAGCCAGGAGCCGGAGATCCTGCGCACCGCCAAGGAGCTGCAGGTGAAGGGTCTGTACGACAATCTCATGAAGTTCAACCATGCCAGTGCCACGCCCACATCATCCAGCTCATCGGCTGGGCAGGGGAAGCCCCAGAATGGGTCCTCATCCAATCACTCCTCGTCCGTGATCTCCACATCCACACACATCTCGCCCAGCGCCGCCATCTCGAGCAGCTGTTCGCCACCACCACCACCCCAATTTGGCTATCAGCCCGGTTTCGGTCACTATCCGCAGCAGCAGCAGCAGCCGCATCTGCCGGGCGGTCCAATGCCAGCCGGAGATGCTCCACTGACCCCCACCCAGGCCACGCCGCATTCGGGGGCGCCGGGAGCGGGTGAATCCGGTGGCCAGTGGCCACTCACACCGTCCGCCGCCGCCGCCATGCTGAACTCCGTCTACGAATCCGCCGCCGACATGAATCCCCTCAAGCGCAAGAAGCTGTCGGCCATCTCGAGCATGCTGCTCAGTGGCAACCGCGACACGCCCATCCTGCGCAACGTCCTCGCCCAGGCCAATCCCGCTGACTCCTCGCAACCCGGACCCACGATGATCACCAACGGCGAGAAGACGCCCACGCATCCCCACCAGAGCAGCCAACTTCCAGCCGGATTGGGAGTGAGTGGTGGTGGTGGAAGCGTCGGCGGTGAGCGCAATCACAGCTTCAATGGTTCCGACTACGGCGGCGACAAGGAACCGCTGTCCCCCTACACGGACCGCTCGTTCGAGGAGGAGACCGGCCAGTCGGGCGGCAAGAAGCCGGAGTGGAAGCGCTACAAGCAGTACACGCGGGCAGACATGATGTGCGCCATCCAGGCGGTGCGCGAAGGGATGAGCGCCCTCCAGGCGAGCCGCAAGTACGGTCTGCCCAGTCGCACCCTCTACGACAAGGTGCGCAAGCTGAACATCACCACGGGTCGCGGCACCCATCGCACCCCGAAGCGCAGTCCACCGGGTGCGGAATCCTCTCAGGGATTCCCCTACTCCGCGGCTGCTGCAGCTGCGGCTCATAACTACGGCGGGCATGGACACGGGCATGGCCACCACTCGGAGGTGAAGCGGGATGGGAAGACGGACCATGTGCCCGCCCATCACGGGATGCCGCCCACCATTCCGCCCTCGGCGGCAGCGCTCCTCGATCACGCCTTCCTGCAGCAGGCGCTGGAGAACCGAGGCGGCGACATGGCCGGACGCGAGGCGCTCCATGCCATGGCTCTGGCCGCCGCCGCCCATGCCGCGGCCAATCGGCTGTCGGCCAGTCCGGCGGAGACGGATCAGCGCTCCAATGGCCACGGGATGCGTTCGCCGAGTCCGCAGGGTCGTCACTATTCGCACGACCAGGAGGCCATGGACTTGGAGATGGAGAAGCACGAGCAGCGGATGATCAAGCGGGAGCGCGACCAGGACGAACGGGAGGATGCGGACGACGAGGAGGATCAGGAGCAGGAGCACGTCGAAGATCTGTCGCTGGCGCGGAAGGAGCGACCCCACTCGCCCTACTCCCCGCAGCCAGGAGGAGGAGATTCCGCCGGCGGGGTGATCATGCACGCCAGTAGTGCACCACCACCCAATGGCAAGGACCATGAGGAGTATCCGGGATCTCCTCCATTCGTGCCCATGGGATTGAAGCGAGAGCTGCTGGAGAGCGAGGAGGCGCAGGCTCGGGCCGACTGA
- Protein Sequence
- MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASATPTSSSSSAGQGKPQNGSSSNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGFGHYPQQQQQPHLPGGPMPAGDAPLTPTQATPHSGAPGAGESGGQWPLTPSAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPTMITNGEKTPTHPHQSSQLPAGLGVSGGGGSVGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGAESSQGFPYSAAAAAAAHNYGGHGHGHGHHSEVKRDGKTDHVPAHHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSASPAETDQRSNGHGMRSPSPQGRHYSHDQEAMDLEMEKHEQRMIKRERDQDEREDADDEEDQEQEHVEDLSLARKERPHSPYSPQPGGGDSAGGVIMHASSAPPPNGKDHEEYPGSPPFVPMGLKRELLESEEAQARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00590167;
- 90% Identity
- iTF_00539586;
- 80% Identity
- iTF_00507691;