Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: -
Assembly: GCA_018153035.1
Location: JAECXR010000001.1:9046035-9051707[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0033 0.23 11.8 0.3 1 23 139 161 139 161 0.97

2 14 2.1 1.5e+02 3.0 3.8 1 23 167 190 167 190 0.97

3 14 3.4e-05 0.0024 18.0 2.5 1 23 367 389 367 389 0.98

4 14 7.8 5.5e+02 1.2 1.9 1 23 395 418 395 419 0.91

5 14 0.00097 0.069 13.5 1.9 3 23 721 741 720 741 0.92

6 14 0.039 2.8 8.4 1.4 1 23 747 770 747 770 0.98

7 14 1.5 1e+02 3.5 0.9 2 23 807 828 806 829 0.91

8 14 0.002 0.14 12.5 0.4 1 23 850 873 850 873 0.97

9 14 0.0014 0.099 13.0 0.3 1 23 1081 1103 1081 1103 0.98

10 14 0.01 0.73 10.2 4.1 1 23 1115 1137 1115 1137 0.98

11 14 0.00047 0.033 14.4 0.3 2 23 1143 1165 1142 1165 0.92

12 14 0.0027 0.19 12.1 5.2 1 23 1171 1196 1171 1196 0.95

13 14 0.0097 0.69 10.3 0.7 1 23 1201 1223 1201 1223 0.97

14 14 0.34 24 5.5 3.7 1 23 1229 1252 1229 1252 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0033	0.23	11.8	0.3	1	23	139	161	139	161	0.97
2	14	2.1	1.5e+02	3.0	3.8	1	23	167	190	167	190	0.97
3	14	3.4e-05	0.0024	18.0	2.5	1	23	367	389	367	389	0.98
4	14	7.8	5.5e+02	1.2	1.9	1	23	395	418	395	419	0.91
5	14	0.00097	0.069	13.5	1.9	3	23	721	741	720	741	0.92
6	14	0.039	2.8	8.4	1.4	1	23	747	770	747	770	0.98
7	14	1.5	1e+02	3.5	0.9	2	23	807	828	806	829	0.91
8	14	0.002	0.14	12.5	0.4	1	23	850	873	850	873	0.97
9	14	0.0014	0.099	13.0	0.3	1	23	1081	1103	1081	1103	0.98
10	14	0.01	0.73	10.2	4.1	1	23	1115	1137	1115	1137	0.98
11	14	0.00047	0.033	14.4	0.3	2	23	1143	1165	1142	1165	0.92
12	14	0.0027	0.19	12.1	5.2	1	23	1171	1196	1171	1196	0.95
13	14	0.0097	0.69	10.3	0.7	1	23	1201	1223	1201	1223	0.97
14	14	0.34	24	5.5	3.7	1	23	1229	1252	1229	1252	0.93

Sequence Information

Coding Sequence: ATGGCGTTGAACAAAAGGTTGAGCTCCCAAGCGGACGGAGCGGACTTCAAGTTTGCGTGTCGCTGCTGTTTGAAGATGGACACCGAGTTCCTAAAGCTGGACTCTGTGACGGTGGCTCGCAGTCTGGATCCGGCGGAGGCAAAGGATAAGATTCCGCTATTGCGTTGCCTGCTGTACTGTACACGCGCTGAAAATCCGGCCGAGCTTCCCCAGTACATCTGCATCGAATGCAGTCAGAGCCTCCAGGTAGCCTACTACTTCCTCCAGAACGCAGTTCGCGCGCACGATGTTCTCTGTCGCAAATTGTGTCCGAATAAGGCTTTCAAAACTCGCATCAACGGTTCCCTAGGCCAGGAGCTGGAACAACATTTGGAGAGCGATACGGAGAGGACGAAGCCATTGAAAACAATGCGCCACGAGTGCCAGGTGTGTGGGGTCATCGTTTACAATCGCCTCGAACTCAAGCAGCACATCCGCCTTCATGCAGATGGACTCGCTTATCACTGCAAAATGTGCAGCTTTACGACGCTAAAGCAGCGTCTGTTGCAGGATCACTATCGTTCAGCACACAACCAAAACGCTACCCAGGCAGAGGAGCTTTCCAAAGTGAAGCTTGAGCAAATAAAAAAGGAAGATGAGGTAAAGGTGTGCACAATGGAGGATATGGAGCTTCTGATACCCACGGTACTAACGCCGGAGGACTACTCAGCGGTGCCGATCGATGCGGACCAGCTGCGGGATATTGAACAGCAGCTGGCGGCCACAATGGGCGAGGCAGCTCCGGGGGTAGACACTCTAACCTCCACATTACCGCCCATGGATACCCAAAACGTGAGCATCGGCACCGAGTATCTTGTCTTGCCAGATGGATCGCTGCAGCAGGTCAACGGAGGCGGCGTGGTCATTGAGTATATAGACGATAGCAAGCCCCCAATTGTTAATCCCCATCCCCCATCCATCAACATAAACCTGCAGAATCTGCTTGGGGGTGGCGACGATGGGATGGATATTGATGTCAATGAGCTGATTGTGGAAGATGTGCTTCCGCAAATAAAAGTAACGCCAAAGCCAGCGCCGCTTGGATCTCCAGTGCACAAGCACAAATGCAAATTGTGCCCCAAAACATTCGCCACTTTGGCACGTCTAAAGTCTCATCAGTTGACGCACAGCCATTTGCCGAAGTTTTTCTGCGATCAGTGCGAATACTACTCACTGCGCAGCGCCGATCTCATCCAGCACTATCAGAACCAACACCACCGGGCGGAGGGTGTGGCGGAGAAAACGGACGGTTTGAAGCAGGAGGTGCGCACTTACTCTTGCGACATGTGCCTCTTTGAGACGCTTACAGTCAACGAACTGCGTGTCCACTACGCACAGAGTCATACGGTTCAGCCGACGGATGTGGAGCTGCGTCCCAGCTGGACGGCCGATAATAGTAATGCTATCAAAGATGAACCATCTGTAGACGTAAAGACGCCGCCAACACTTCCGCCATTGACAAACTCTTCCGAAAACCACGTACCCATCAAATGTCCTCCTGCAGTTGCAGACACACAACAGGGGCAATTTCAGGAGCTGCCGGTGGAGGCAACGACATCCGTTGCCCAAACCGAAGTCATCAATGCGGTGGTAGATGCCACGCCGCATTTCTTTGCGGCCACTTCCAATTCCATTGACGCAGTTCATGCGCCACAAGTAGCAGAAGTTGCCGTAACCACTGACGGGGCTCCATGCAGTTCATTCGAAATCTTTCCAGAAATCTCCCAAGGCCATTTGTCGGCTAACGAAACCGTTCCCCAGGCTCCGGCAAATACTTCCAATCAAAATATTTCCATGTTCGGTGACATGCAGGATTTTATTGACAACACCGACGTGGCCGCCATATGCACCATTCCAGCCGATGATATGCCCGTGGTTGATGGCGACGACATCGTTATTGATAATAACAATATCAGCCTGGACTTTGATGCCGAAAATCTGTTCGAGGACTTTGAAGAAGACGAGGAGGTGGCGGCCGAGGAGGAGGACGATGAAGGCGAAAACGAGGACGAGAATGAGAACAATGATGCAGCCACTGATCAGAATCTGCTGCTAACCAGTGACGATGACGACGTGGACGATTTCGATGATGAGCAATCGAAGCATCTGCAGAAGCCTTATTGTATTTATTGCAACAAAAAATTCACCAGCCAGTACAAATTTGAGAATCACATGTTTGTTCATCGGGGTCTGGCTCCCTATCGCTGCGAGTTGTGTACCAATCTCTACAACATGAAGCGACTCCTGATCAGGCACTACAAGACCGTGCACAAGCGAATGCCCACAAGGGATATGGTCCAAGCCAAAGGTGACAAGGTTACGGTGGCACGATCGAGCCTTGAAAAGATCGAAACGAACCTCAACAAGAATCCGATGCTCATGTGTGCAAAGTGTCCGTTCGAGTGCGAGCCGGAGGGAGAGATGCGAAAGCATTTGAATGCCCACCACGGCATCAACGATGGGGTATCCGTTCATGCAAACGAAGTGTTTATAATACGCAAACTGCCCTTTGAGTGCCCGCGATGCATTCGCTCGTTTGCGGCCAAGAGCACCCTGGTTCGTCATCTGCAGCGAAGCCATTTGGTGGAGACGATCATCGAGATGCCATCATCACAAGCAACAGCCAGTTCGGCGGCCACAACCACAACAACGACGGCCACGGCGACCACATCCGGGCCGGCCAGCAGCACTCAGGATGGAGATAGGCCAGACTATAGGATGACAGTATCGTCGACTGCTGCTAAAAGTGGCGGTGGCGGTGGCAATGGGGAATGCGAGGGGACAGGCAAAGATGATGATGGAGACCCAGCAGGAGCAGGAGCATCTATTAAAGAGGAATTAACACAGCCCAAAGAGGAAATCGATGTCGTTTCATTGGAGACCTCCGCTGCCCCAAGAGCCGGCATATCATCAACAACGTCAGCATATCCTGGAACCGCAGTAACCACCTCAACAACATCGCCCATTACAACCACAGCCTCATCCACATCGGCATCCTTCTCGACACTTTACCCCACGCCCACGCCATTCGACTTGGACTGTGACCTGATATCCGACGTCCCAGTCGCGCCATCCACACCCACGCCCAATTCAAACTCTAATCCCAGCACTCTTTTAAATGGCAGTGATAAGTTCCTGTCAAATCTGCCACAGGCAGATAAATATGTACCATCCAATTCCCGACTGCCACGCACCCCATCATACAAGTGCAAGCTGTGCAGCGAGACATTCGACGAGCTGGGAAAGCTGGTTAAGCACGAGATGGTGCACTCGAGCACGGAATCTAATCGGTATGGGTATCAACACAAGTGCGCTATTTGCAACACCACCTACCGCAATCTAACTTTGTTGAAGTTTCACATGAAACGGCACACGAATCGCAAGATTCAGTGCAAGCTGTGCCCAAAGGCTTTCGCAACCAACCAGGAGCTGGATCGTCACTCGAAGGCCAAGCATATGAGGCCGAAGACGTTCCGGTGCACGTTGAACAACTGCAACAAGACGTTCGCATACAAGCACCACATGGTGCGGCATCAGAATGCGACCCACTTGCAGACGCGGCACGTGTGCACCATATGCGACAAGGAGATGATGACCAGCCTACTACTGCGAAACCACATGTCCGTACACAAAAGTGGAACGCTCTATAAGTGTCCACATTGTGATCGGCAATATTTGCGTCGGGGACGGATTTGTTCACATATTCTGAAAGTCCATAAAATCAAAGTAACAGAGGCCGAACTAGCCGAAATCTTTAAAACCTGCTCCAATGGCCCGCACGAATTAAAGTCGAGGAGCCGCCAGGGACAGCTAGTGCGGCGCAAGGGCTTGGACATCAAAACGGAAGTCAAAGAAGAACCGGGTCTTCAATCATCTGCAGAGGATATATAA
Protein Sequence: MALNKRLSSQADGADFKFACRCCLKMDTEFLKLDSVTVARSLDPAEAKDKIPLLRCLLYCTRAENPAELPQYICIECSQSLQVAYYFLQNAVRAHDVLCRKLCPNKAFKTRINGSLGQELEQHLESDTERTKPLKTMRHECQVCGVIVYNRLELKQHIRLHADGLAYHCKMCSFTTLKQRLLQDHYRSAHNQNATQAEELSKVKLEQIKKEDEVKVCTMEDMELLIPTVLTPEDYSAVPIDADQLRDIEQQLAATMGEAAPGVDTLTSTLPPMDTQNVSIGTEYLVLPDGSLQQVNGGGVVIEYIDDSKPPIVNPHPPSININLQNLLGGGDDGMDIDVNELIVEDVLPQIKVTPKPAPLGSPVHKHKCKLCPKTFATLARLKSHQLTHSHLPKFFCDQCEYYSLRSADLIQHYQNQHHRAEGVAEKTDGLKQEVRTYSCDMCLFETLTVNELRVHYAQSHTVQPTDVELRPSWTADNSNAIKDEPSVDVKTPPTLPPLTNSSENHVPIKCPPAVADTQQGQFQELPVEATTSVAQTEVINAVVDATPHFFAATSNSIDAVHAPQVAEVAVTTDGAPCSSFEIFPEISQGHLSANETVPQAPANTSNQNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEEDEEVAAEEEDDEGENEDENENNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVTVARSSLEKIETNLNKNPMLMCAKCPFECEPEGEMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKSTLVRHLQRSHLVETIIEMPSSQATASSAATTTTTTATATTSGPASSTQDGDRPDYRMTVSSTAAKSGGGGGNGECEGTGKDDDGDPAGAGASIKEELTQPKEEIDVVSLETSAAPRAGISSTTSAYPGTAVTTSTTSPITTTASSTSASFSTLYPTPTPFDLDCDLISDVPVAPSTPTPNSNSNPSTLLNGSDKFLSNLPQADKYVPSNSRLPRTPSYKCKLCSETFDELGKLVKHEMVHSSTESNRYGYQHKCAICNTTYRNLTLLKFHMKRHTNRKIQCKLCPKAFATNQELDRHSKAKHMRPKTFRCTLNNCNKTFAYKHHMVRHQNATHLQTRHVCTICDKEMMTSLLLRNHMSVHKSGTLYKCPHCDRQYLRRGRICSHILKVHKIKVTEAELAEIFKTCSNGPHELKSRSRQGQLVRRKGLDIKTEVKEEPGLQSSAEDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615723;
90% Identity: iTF_00566337; iTF_00539205; iTF_00488255; iTF_00476177; iTF_00477584; iTF_00550482; iTF_00481784;
80% Identity: -