Basic Information

Insect: Drosophila peninsularis
Gene Symbol: -
Assembly: GCA_035047485.1
Location: JAWNPN010000027.1:5161903-5165877[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 9.8 6.5e+02 1.1 2.0 3 16 57 70 56 72 0.84

2 13 0.0073 0.49 10.9 0.4 1 23 216 239 216 239 0.96

3 13 5e-05 0.0033 17.8 1.9 1 23 244 267 244 267 0.95

4 13 0.00032 0.021 15.2 4.6 1 23 272 294 272 294 0.98

5 13 5.3 3.6e+02 1.9 4.5 2 23 301 324 300 324 0.89

6 13 0.00048 0.032 14.7 1.0 3 23 334 355 333 355 0.95

7 13 0.0037 0.25 11.9 0.1 1 23 361 384 361 384 0.95

8 13 0.15 10 6.8 0.2 5 23 400 419 395 419 0.89

9 13 3e-05 0.002 18.5 0.4 1 23 449 471 449 471 0.98

10 13 1.5e-05 0.00098 19.4 5.3 1 23 477 499 477 499 0.96

11 13 8.9e-06 0.00059 20.1 0.1 2 23 506 527 506 527 0.97

12 13 0.00073 0.048 14.1 1.5 1 23 534 556 534 556 0.99

13 13 0.00047 0.032 14.7 4.3 1 23 562 585 562 585 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	9.8	6.5e+02	1.1	2.0	3	16	57	70	56	72	0.84
2	13	0.0073	0.49	10.9	0.4	1	23	216	239	216	239	0.96
3	13	5e-05	0.0033	17.8	1.9	1	23	244	267	244	267	0.95
4	13	0.00032	0.021	15.2	4.6	1	23	272	294	272	294	0.98
5	13	5.3	3.6e+02	1.9	4.5	2	23	301	324	300	324	0.89
6	13	0.00048	0.032	14.7	1.0	3	23	334	355	333	355	0.95
7	13	0.0037	0.25	11.9	0.1	1	23	361	384	361	384	0.95
8	13	0.15	10	6.8	0.2	5	23	400	419	395	419	0.89
9	13	3e-05	0.002	18.5	0.4	1	23	449	471	449	471	0.98
10	13	1.5e-05	0.00098	19.4	5.3	1	23	477	499	477	499	0.96
11	13	8.9e-06	0.00059	20.1	0.1	2	23	506	527	506	527	0.97
12	13	0.00073	0.048	14.1	1.5	1	23	534	556	534	556	0.99
13	13	0.00047	0.032	14.7	4.3	1	23	562	585	562	585	0.98

Sequence Information

Coding Sequence: ATGGAAACGTGTCGCACCTGTGCAAGGTGCGATTTCGAAAATGGCAACAACTATTGGCTGGATATGTTTCATCCAACGCGTTGGCAAAGTGAAATGGCGCAAATACGCTCAGAGTTCGTCAACTGGAAGTTACAGatCGCACCAAACGATGGACTGCCACAAAAAATATGCAGTGACTGCTTTACAAAGTTCTGCTCAGTTTACACGTTTCGCATAGCCTGCCAGGACGCACAATTAAAGttgtcaaatatttttgataaaatCGATGTGAACTTGCTGTATGATAGAAACGATGAAGAAGAAATTGaagttgatgttgatgttgatatTGATGAGTTCGAAGAAACTACAAAAATATGTACGGTATCAGAAACAGCActaacaacgacaacaacgacagaGAACACTGCCAGTACTGCGGCTAAATCGCCCACACCCATAGAAATGTTAGTGGAAACAATTAACGAGAGCATTAACGAAACCGAATCCTTACAGCCAGAAGATGAAGAACTTGATATAGCTCCAGATAGCAATTCACTAAACATAAGCTACACTTGTAAATTCTGTTATAAGCCACAAGAGAGCTATGAACTACAGCACCTCTTACTAGAGCACATAAGCTTCTGCCACGATCCGGATCAACCCTATAACTGTCCAGAGTGCGCTGAGTGTTTTCAAGACACAGCTTCGCGCACCGTTCACATGAAGGGCGTTCATGTGGTCAAGCACTACGCCTGTGAGGTCTGTGGCAAAAAGTATGGAGATCGCCACAATCTCGAGCATCACGTTGAGAAGTATCACTCGGAAACGGACTTCGAGTGCAGCATGTGCGAGAAGCGCTTTTTTACGCGCAAGAGCCTCCACTACCACATGAACTGGCACAAGCCCGAGCGCCAGCTCCGATGTCGCCACAGCGGCTGTGACCGGCTGTTTATCAATCAACGACATCTCATATGTCACGAAGCAACCCACACAACGGGCTCCCGCAAGAGCGAATACTGCGGCTTTTGTGGCAAAGCTTTCATACATGTAAAAACCCTTCGTTGGCACATCTATCGACAGCATGGCGGAGAGAAGCCTTTCAAATGCGCCATCTGCACTGAGGTGTTCGCCTCGTATGTGGAAAAGCGCATTCATATGCTTGAGCTGCACACGGAAAATCTGACCCATCAGGAGCGCAGCGAGTGCATGTTTCAGTCCTGTCGCCAGGAGTTTGACAACGAGCAGGAGCTCATCCAGCACATGACCATGGAGCACGTACAGCGCGAAGTTTCCTCTACTCCGGTCATAGCGAACAATAAGCGCGTGATCCAATGCAAAAGGGAACGACAGTACACGGGTCTCTTCCAGTGCGGCAGCTGCACCCAACGTTTCAACATGAAGTCCGCCTTGGAGCGTCACATGGCTGTGCACTCGACGGATCGGCTGCATGCCTGTTCGCACTGCTCCAAGCGTTACAAGCGTGCCCAGGATCTCAAGTGGCATATGAAGAcccatgaaaatgaaaagcctAATGTGTGCGACGTTTGCGGCAAGGCTTTTGCCTTGAAATATGTCCTAACTCAGCATATGCGCAGTCATGAGGtTCTTGAGAAGAATTTCAAGTGTGAGACCTGTGGACGGTCGTATCTGTTTGAAAAGTCATTGCGTCTGCATCAACGCGTGCACACAGGCAATACCTACTACAAATGCGATCTGTGCCAAGAGCGATTTGTCACGCACATCAAATTTAAAACCCATATGAAGAAGGAACATGACGGCGACCAGTCGAACTCTAAGGATACGCTGGATGATTTGATCGATATTGTGATTAACTAA
Protein Sequence: METCRTCARCDFENGNNYWLDMFHPTRWQSEMAQIRSEFVNWKLQIAPNDGLPQKICSDCFTKFCSVYTFRIACQDAQLKLSNIFDKIDVNLLYDRNDEEEIEVDVDVDIDEFEETTKICTVSETALTTTTTTENTASTAAKSPTPIEMLVETINESINETESLQPEDEELDIAPDSNSLNISYTCKFCYKPQESYELQHLLLEHISFCHDPDQPYNCPECAECFQDTASRTVHMKGVHVVKHYACEVCGKKYGDRHNLEHHVEKYHSETDFECSMCEKRFFTRKSLHYHMNWHKPERQLRCRHSGCDRLFINQRHLICHEATHTTGSRKSEYCGFCGKAFIHVKTLRWHIYRQHGGEKPFKCAICTEVFASYVEKRIHMLELHTENLTHQERSECMFQSCRQEFDNEQELIQHMTMEHVQREVSSTPVIANNKRVIQCKRERQYTGLFQCGSCTQRFNMKSALERHMAVHSTDRLHACSHCSKRYKRAQDLKWHMKTHENEKPNVCDVCGKAFALKYVLTQHMRSHEVLEKNFKCETCGRSYLFEKSLRLHQRVHTGNTYYKCDLCQERFVTHIKFKTHMKKEHDGDQSNSKDTLDDLIDIVIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00568439;
90% Identity: iTF_00559662; iTF_00544659; iTF_00545410; iTF_00476796; iTF_00473233; iTF_00493842; iTF_00554547; iTF_00551764; iTF_00599764; iTF_00549717; iTF_00516442; iTF_00532540; iTF_00479646; iTF_00540544;
80% Identity: -