Dnig024304.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nigromelanica
Gene Symbol
Lztr1
Assembly
GCA_004149445.1
Location
SCDR01000764.1:163112-166477[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2e-13 8.7e-11 42.5 0.2 1 108 568 709 568 711 0.88
2 4 0.35 1.5e+02 3.1 0.1 77 108 710 741 706 743 0.89
3 4 8.8e-20 3.8e-17 63.0 0.0 9 97 803 891 795 906 0.85
4 4 5.4 2.3e+03 -0.7 0.0 72 100 900 928 893 936 0.84

Sequence Information

Coding Sequence
atgctaaagtccaTACTTGGCGGGGACGCGAATGGTTCTGCGGAAGATATACCAAGCGGGGGCGTTGGcgcggccagcggcagcagcggcagaagtggcagtggcagcagcagcagcagcgcccgAGCACTCAGCCGAGCCAGTTGCGGCCTCGGCTCCAGCTCAATATCCAGTGGCCTAAGCGCCGTCTGTGGGCTAGTCGGAAGCGGCAGTGGGAGTGGCAGTGGGAGTGCAAGTGGGAGTGCCAGTGGAAGTGCCAGTGGGAGTGGAAGTGCGAGTGGCGGCAGCACACCAGCAACCGTCTATTGCCCTGCATGCGTTGCCAACGGctcgcagcaacaacagctggcaTTCGGTTCGGGAGCTGAGGCGTTGCTGTTGCGCGACTCCAAATCGGGTAAGCGGCCAAAGCCGCGGAAGAGTGCATCATCCGCTGGCTGCCTGGACGCGCAGCATATACGCAACAATCTGAAAATGTCCACATCGAGCTCAATGCGCAGCACACGTGGCACCTGcgctggcagcagcggcggcggtggtggcagcagtagcagcagcagcaccgcctCCGCAATAATACCATCCGGTGGCTGCAGCTTGGCCTACGATGccagcagcaatggcagctgcagcagtgtCAACGGCAAAATCAACTCCCCGGGCAGCTTTAGCTGCAATGCGCTCAACGTGGACTTCAGCTCGTATACGGCAACACATCAGTGGACACGCATGCTGGAATGTGCCGAATTTGTGGGTGCCAAGCGCAGCAAGCACACGGTGGTTGCCTACAAGGATGCCATGTTTGTGTTTGGCGGCGACAATGGCAAGAACATGTTAAACGATCTGATACGATTTGGTGTCAAGGATAAGTCGTGGGGCCGGGCATGCGCAACGGGCACACCGCCAGCGCCGCGCTATCATCATTCGGCTGTTGTTGCGGGCAGCTCGATGTTCATCTTTGGCGGCTATACGGGCGACATACACTCCAATTCGAATCTGACCAACAAGAATGATTTGTTTGAGTACAAGTTCCTCAGCGCCATGTGGGTGGAGTGGAAATTCTCCGGCAGGCAACCGGTGCCGCGTTCGGCGCATGGCGCCGCCGTTTATGACAACAAAATGTGGATTTATGCCGGCTACGATGGCAATGCACGGCTCAATGATATGTGGACGCTGAATTTGACCGGCGAAAATCATCAGTGGGAGGAGGTGGAACAGCAGGGCGATCGTCCGCCCACCTGCTGCAATTTTCCGGTGGCCGTGGCACGCGATGCCATGTACGTCTTCTCCGGCCAGAGCGGTCTGCAGATAACAAATTCGCTGTTTGAGTTTCACTTCAAGACGCGCACCTGGCGTCGCATCTCCAATGAGCCGGTGCTGCGTGGTGCCACCTCGGCGCCACCGTCACGTCGCTATGGCCACACAATGGTCCATCACGATCGTTTCCTCTATGTGTTTGGCGGTTCGGCCGATTCCACGCTGCCGAATGATTTGCACTGCTACGATCTGGACTCGCAGGTGTGGTCGGTCATACTGCCGGAACAGAATTCGGATGTGCCGTCGGGTCGTGTATTTCATGCATCGGCGGTAATTGGCGATGCCATGTACATATTTGGCGGCACCGTCGACAACAGCGTCCGACGCGGCGACACCTATCGCTTTCAGTTTTCCAGCTATCCAAAGTGCACGCTGCGCGACGACTTTGGCAAGTTCTTTCACGAGAAACAATTCTGTGACATTCAGTTTGTCGTCGGCGCCGAAGAGATACGCATCTTGGCGCACATCGCCTTTGTTGGGGCGCGTTCCAAGTATTTGCGCAACAAGATATTGTCGGCCCGCGAGGCGCGTCAACAGCAAATGGAGAAGGTGTATGGTGTTGGCCAGGTGGATGCACAGGCACTAAATACGGGCGTCGGGGGCGATCGTGTTCCCATGCTGGAGGTGCGACTGGCGCATGCCTCGCCCGAAGCATTCGAGATAATACTTAATTATATCTATACGGATCGCATTGACCTGAAGGACTCTTACAGCAAGAAcatcatcatcctcatcaCCGACATCTATCAGTTGGCTGGCCTATTCACCATGCCGCGCCTGGCGCAGGGCTGCATACAGTATTTGgactataaaattaataagataAACGTTCTCGAGGCGCTCTACAATGCCGACAAAAATAACATTAAAATCATCAAGGATCACTGCATGCAGTTCATCATCAAGGAGGAGAACTTCACTGAAGTGGTCATGTCCAGTGAGTTCAGTGATCTCGACAAGCAGCTGCTGGTCGAGATAATACGCAAGCGATTGCATCCCAGTAAGCTGATCATGGACACCAGTTTTGAGACGAATATTGGTACCACGTTGGAGCATGATTTGTCCATGTTCTTGGAGACGACGGGCAGGGACTTCTGCGATATAAGCCTCATACTGGAGGATCATGTGATACCGGCCCATAAATCTGTGCTATCAGCACGTTGTACCTATTTCCAGGGTATGTTCCGCTCATTCATGCCGCCGGATAATACCGTCAATATACAAATTGGAGAAATTTCACCGTCACTGGAGGCTTTCCATTCGCTGTTacgctatatatattatgggGAAACAAAGATGCCGCCACAGGATGCACTCTACTTGTTCCAGGCACCCTGTTTCTATGGCCTGTCTAACAATCGATTGCATGCATTCTGCAAATACTCATTGGAGCATAATATCACATCGGAGAATGTGCTGCAGACGCTGGAGGCGTCcgatataacaaaaatatatgacatCAAGGATTACGCATTGAAACTAATTGTGAAAGATTTTGCCAAAGTGGCCAGGCTGCCCAAAATAGCCGGTTTGTCGCGCGAACTGTTGCTGGAGATAATACGCGCTGTGGCCGATTCGCAAGGCGAGTTTCTGACTCGCATCAATATCAATACCGATATCTGA
Protein Sequence
MLKSILGGDANGSAEDIPSGGVGAASGSSGRSGSGSSSSSARALSRASCGLGSSSISSGLSAVCGLVGSGSGSGSGSASGSASGSASGSGSASGGSTPATVYCPACVANGSQQQQLAFGSGAEALLLRDSKSGKRPKPRKSASSAGCLDAQHIRNNLKMSTSSSMRSTRGTCAGSSGGGGGSSSSSSTASAIIPSGGCSLAYDASSNGSCSSVNGKINSPGSFSCNALNVDFSSYTATHQWTRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFLSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENHQWEEVEQQGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVILPEQNSDVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFHEKQFCDIQFVVGAEEIRILAHIAFVGARSKYLRNKILSAREARQQQMEKVYGVGQVDAQALNTGVGGDRVPMLEVRLAHASPEAFEIILNYIYTDRIDLKDSYSKNIIILITDIYQLAGLFTMPRLAQGCIQYLDYKINKINVLEALYNADKNNIKIIKDHCMQFIIKEENFTEVVMSSEFSDLDKQLLVEIIRKRLHPSKLIMDTSFETNIGTTLEHDLSMFLETTGRDFCDISLILEDHVIPAHKSVLSARCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFHSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITSENVLQTLEASDITKIYDIKDYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSQGEFLTRININTDI