Dnav000297.1
Basic Information
- Insect
- Drosophila navojoa
- Gene Symbol
- Lztr1
- Assembly
- GCA_001654015.2
- Location
- NW:16055-21698[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-14 6.3e-12 45.1 0.8 1 107 557 697 557 700 0.88 2 4 0.3 62 3.3 0.2 77 109 699 731 695 732 0.90 3 4 7.2e-20 1.5e-17 63.2 0.0 8 97 791 880 785 895 0.85 4 4 5.2 1.1e+03 -0.7 0.0 72 100 889 917 883 925 0.84
Sequence Information
- Coding Sequence
- ATGCTTAAGTCCATACTTGGCGCAGACTCGAATGGTTCTGCGGAAGATCTACCAAGCGGAGGCGTTGGCGTTGTCGTGGCCAGCGGCAGTAGCGGGGgaagtggcagtggcagcagccgcagtacTGGAGCGCTAAGCCGAGCCAGTTACGGCCACGGCTCCAGCTCAATATCGAGTGGTCTAAGTGCGGTTTGTGGCTTAGTCGgaagcggcagcggcagcggtagcggcagtggcagtggcagtgcaAGCGCAAGTGGTGGCAGCACACCAGCTACCGTTTATTGTCCTGCATGCGTGGCGAACAGttcacaacaacagcagcagcaacagcaggcgctTGCCTCTGGCGCTGAGGGTTTACCAGCGCGCGAGTCAAAATCAGGAAAGCGGGCTAAGACGCGGAAGAGTGCATCAACGGCTGGCTGCTTGGACGCTCAACATATACGCAACCATTTAAAAATGTCTACATCGAGCTCCATGCGCAGCACCCGCGGCAACGgggccggcagcagcagcagcagtagcaccaCCTCGGCTGTTATACCAtccggctgcagcagcatcgccTACGATTCGAATAGCAatggcagttgcagcagcttcAACGGCAAAGTCAACTCGCCaggcagctacagctgcaatGCACTCAATGTCGACTTCAGCACCTATACGGCAACGCATCAGTGGTCGCGCATGCTTGAGTGTGCGGAATTTGTCGGTGCCAAACGAAGCAAGCACACTGTGGTTGCCTACAAGGATGCCATGTTCGTGTTTGGCGGTGACAATGGCAAGACCATGCTCAACGATCTCATTAGATTCGGGGTCAAGGACAAGTCCTGGGGACGTGCATGCGCAACGGGCACACCACCAGCTCCGCGCTACCATCATTCGGCAGTTGTGGCGGGCAGCTCGATGTTCATCTTTGGCGGCTATACAGGCGACATTCACTCCAACTCGAATCTGACCAACAAGAATGATCTGTTTGAGTATAAGTTTCTCAGCGCCATGTGGGTGGAATGGAAATTTTCCGGCAGGCAGCCAGTGCCACGTTCGGCGCACGGTGCCGCCGTCTATGATAACAAAATGTGGATATATGCTGGCTATGATGGCAATGCACGATTGAATGATATGTGGACCTTGAATTTGACAGGCGAGAATCATCAGTGGGAGGAGGTGGAACAGCTAGGCGATCGTCCGCCCACTTGCTGTAATTTTCCCGTTGCTGTTGCGCGCGATGCTATGTATGTGTTCTCTGGCCAGAGTGGCTTGCAGATCACCAATTCTCTGTTTGAGTTCCACTTTAAGTCGCGCACTTGGCGTCGCATCTCCAATGAGCCGGTTCTGCGTGGTGCCACCTCCGCGCCACCATCGCGTCGCTATGGCCACACCATGGTGCATCATGATCGTTTCCTCTATGTCTTTGGCGGCTCGGCTGACTCCATGCTCCCAAACGATTTGCACTGCTACGATCTGGACTCGCAGGTATGGTCCGTCATACAGCCGGAGCAGAACTCGGATGTGCCATCGGGACGCGTTTTCCATGCCTCGGCCGTCATCAGCGATGCCATGTACATCTTTGGCGGCACCGTCGACAACAGCGTGCGACGCGGCGATACCTATCGCTTTCAGTTCTCCAGCTATCCAAAGTGCACGCTGCGCGATGACTTTGGCAAATTCTTTCACGAGAAACAGTTCTGTGATATTCAGTTTGTGGTGGGTGCCGAGGAGACGCGTATTCTGGCCCACATTGCCTTTGTGGCAGCACGCTCTAAGTATTTGCGGAACAAGATATTGTCGGCGCGTGAGGCGCTTCAGCACCAAATGGAAAAGCTCTATGGCGTTGGCCAGGTAGATGCGCTTGCTCTCAATACGGGCGTTGGCGCCGATCGTACACCGATGCTGGAAGTGCGACTATCGCATGCCTCGCCCGAAGCATTCGAAATCATacttaactacatatatacggATCGCATTGACTTAAAGGAGTCCTACAACAAGAACATCATCATTCTCATCACGGACATCTATCAATTGGCTGGGCTTTTCACAATGCCCCGCCTGGCGCAGGGCTGCATACAGTATCTGGACTTTAAGATCAATAAGATGAACGTGCTCGAGGCGCTCTACAATGCGGAGAAGAACAACATTAAAATCATCAAGGATCATTGCATGCAGTTCATCATCAAAGACGAGAACTTCACCGATGTGGTCATGTCCAGTGAGTTTAGCGATCTAGATAAGCCGCTTCTGGTCGAGATAATACGCAAGCGTCTGCATCCCAGCAAACTGGTCATGGACACCAGCTTTGAGTCGAATATTGgtACCACATTGGAGCACGATTTGTCCATGTTCTTAGAGACGACGGGCAAGGACTTTTGCGATATAAGTCTCATACTCGATGATCAGGTGATACCGGCCCATAAGTCTGTGCTATCGGCCCGTTGCACCTATTTCCAGGGCATGTTCCGCTCGTTCATGCCGCCGGATAATACAGTCAATATACAAATTGGTGAAATTTCACCCTCACTGGAGGCGTTTCACTCGCTGCTacgctatatatattatggagAGACAAAGATGCCGCCGCAGGACGCACTCTATCTGTTCCAGGCACCCTGTTTCTATGGCCTATCGAATAATCGCTTGCATGCGTTCTGCAAATACTCATTGGAGCATAATATAACGTCAGAGAATGTGCTGCAAACGCTGGAGGCGTCCGATATAACTAAAATCTATGACATCAAGGATTAtgcattgaaattaattgtgAAAGATTTTGCCAAGGTGGCCAGGCTACCAAAGATAGCCGGTTTGTCGCGCGAACTGTTGCTGGAGATAATACGCGCTGTGGCCGATTCGCAAGGCGAGTTTCTGACCCGCATCAATATCAATACCGATATCTGA
- Protein Sequence
- MLKSILGADSNGSAEDLPSGGVGVVVASGSSGGSGSGSSRSTGALSRASYGHGSSSISSGLSAVCGLVGSGSGSGSGSGSGSASASGGSTPATVYCPACVANSSQQQQQQQQALASGAEGLPARESKSGKRAKTRKSASTAGCLDAQHIRNHLKMSTSSSMRSTRGNGAGSSSSSSTTSAVIPSGCSSIAYDSNSNGSCSSFNGKVNSPGSYSCNALNVDFSTYTATHQWSRMLECAEFVGAKRSKHTVVAYKDAMFVFGGDNGKTMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFLSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENHQWEEVEQLGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKSRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSMLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRVFHASAVISDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFHEKQFCDIQFVVGAEETRILAHIAFVAARSKYLRNKILSAREALQHQMEKLYGVGQVDALALNTGVGADRTPMLEVRLSHASPEAFEIILNYIYTDRIDLKESYNKNIIILITDIYQLAGLFTMPRLAQGCIQYLDFKINKMNVLEALYNAEKNNIKIIKDHCMQFIIKDENFTDVVMSSEFSDLDKPLLVEIIRKRLHPSKLVMDTSFESNIGTTLEHDLSMFLETTGKDFCDISLILDDQVIPAHKSVLSARCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFHSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLHAFCKYSLEHNITSENVLQTLEASDITKIYDIKDYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSQGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- iTF_00561095;
- 80% Identity
- -