Dpen002835.1
Basic Information
- Insect
- Drosophila peninsularis
- Gene Symbol
- Lztr1
- Assembly
- GCA_035047485.1
- Location
- JAWNPN010000028.1:3690123-3693642[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.2e-07 9.8e-05 22.5 0.2 1 47 560 607 560 618 0.85 2 5 3.2e-08 7.5e-06 26.1 0.0 49 107 635 700 621 703 0.82 3 5 0.31 73 3.6 0.1 77 109 702 734 698 735 0.90 4 5 4.8e-19 1.1e-16 60.9 0.0 9 96 795 882 787 898 0.87 5 5 6.4 1.5e+03 -0.7 0.0 72 100 892 920 885 928 0.84
Sequence Information
- Coding Sequence
- ATGCTTAAGTCCATACTTGGCGCAGACACGAATGGTTCTGCGGAAGATATACCAAGCGGAGGCGTTGGCGTTGTCGTGGCCAGCGGCAGTAGTGGGGGAAGTGGCAGTGGCACCAGCCGTAGTGCTGGAGCGCTAAGCCGAGCCAGTTACGGCCACGGTTCCAGCTCAATATCGAGTGGCCTAAGTGCAGTGTGTGGCCTGGTCGGaggtggcagtggcagcggcagtggcagtggcagtgcaagtgcaagtgcaagtgGTGGCAGTACACCAGCTACCGTGTATTGCCCTGCATGCGTGGCGAACagctcacagcagcagcagcagcagcagcagcagcaggcgcttgCCTCTGGGGCTGAGGCAGGGCTAGCGCGCGAGTCGAAATCGGGTAAGCGGGTGAAGGCGCGCAAGAGCGCATCAACGGCTGGCTGCTTGGACGCGCAACATATACGCAACCATCTGAGAATGTCCACATCCAGCTCCATGCGCAGCACTCGCGGCAATGGtgccggcggcagcagcagcagcagtagcaccGCCTCGGCTGTCATACCatccaactgcagcagcattgCCTACGACTCCAACAGCAAcggtagctgcagcagctttaaTGGCAAAGTCAACTCGCCAggcagctacagctgcaaTGCGCTCAATGTCGACTTCAGCACCTATACGGCAACGCATCAGTGGTCGCGCATGCTGGAGTGTGCGGAGTTTGTGGGCGCCAAGCGAAGCAAGCACACTGTTGTTTCCTACAAGGATGCCATGTTCGTGTTTGGCGGTGACAATGGCAAGACCATGCTCAACGATCTAATTAGGTTCGGCGTCAAGGATAAGTCGTGGGGACGTGCATGCGCAACGGGCACACCACCCGCTCCGCGCTATCATCACTCAGCAGTTGTCGCTGGCAGCTCAATGTTCATCTTTGGCGGCTACACGGGCGACATACACTCCAACTCGAATCTGACCAACAAGAATGATCTGTTTGAGTACAAGTTTCTCAGCGCTATGTGGGTGGAATGGAAGTTTTCGGGAAGACAGCCAGTGCCGCGGTCGGCGCATGGCGCCGCGGTCTATGATAACAAAATGTGGATTTATGCTGGCTACGATGGCAATGCACGATTGAATGATATGTGGACTTTGAATTTGACGGGTGAGAATCACCAATGGGAGGAAGTGGAGCAGCAGGGTGATCGCCCGCCCACTTGCTGCAATTTTCCCGTCGCTGTTGCTCGCGATGCTATGTACGTTTTTTCTGGCCAGAGCGGTCTGCAGATCACCAATTCTCTGTTTGAGTTTCACTTTAAGACGCGCACTTGGCGGCGCATCTCCAATGAACCGGTTCTGCGTGGTGCCACCTCCGCGCCACCATCGCGCCGCTATGGCCACACCATGGTGCACCATGATCGTTTCCTATATGTTTTTGGCGGCTCAGCCGACTCCATGTTGCCAAATGATTTGCACTGCTATGATCTGGACTCACAGGTGTGGTCCGTCATACAGCCGGAGCAGTACTCGGATGTGCCGTCGGGTCGCGTCTTCCACGCATCGGCCGTCATTAGCGATGCAATGTATATCTTTGGCGGGACCGTGGACAACAGCGTACGACGCGGCGATACCTATCGCTTTCAATTCTCAAGCTATCCAAAGTGCACGCTGCGCGATGACTTTGGAAAATTCTTTCACGAGAAACAGTTCTGTGATATTCAGTTTGTGGTGGGTTCCGAGGAGGTACGCATACTGGCCCACATTGCCTTTGTGGCAGCGCGGTCCAAGTATTTGCGGAACAAGATATTGTCGGCGCGCGAGGCGCTGCAACACCAAATGGAAAAGTTCTACGGCGTTGGCCAGGTGGATGCGCTGGCTTTGAATACGGGTGTTGGCGCCGATCGCACGCCCATGCTGGAAGTGCGCCTATCACATGCCTCGCCCGAGGCATTCGACATCATACTCAACTACATCTATACGGATCGTATCGATCTGAAGGAATcctacaacaaaaacatcatCATTCTCATCACGGACATCTATCAGTTGGCCGGACTCTTCACAATGCCCCGCCTGGCGCAGGGCTGCATACAGTATCTGGACTTTAAAATCAACAAGATAAACGTGCTCGAAGCGCTCTACAATGCCGACAAGAACAACATTAAAATCATCAAGGATCATTGCATGCAGTTCATTATCAAAGACGAGAACTTCACCGAGGTGGTCATGTCCAGTGAGTTCAGCGATCTGGACAAGCCTCTGCTCGTCGAGATAATACGCAAGCGTCTGCATCCCAGCAAACTGGTGATGGACACCAGCTTTGAGTCGAATATTGgtacCACATTGGAGCACGATTTGTCCATGTTCTTAGAGACAACGGGTAGGGACTTCTGCGATATAAGTCTCAGACTGGATGACCAGGTGATAGCGGCCCATAAGTCTGTACTGTCAGCGCGTTGTACCTATTTCCAGGGCATGTTCCGCTCGTTCATGCCGCCGGATAATACCGTCAATATACAAATTGGCGAAATTTCACCCTCACTGGAGGCATTTCATTCGCTGCTGCgctatatttattatggaGAGACTAAGATGCCGCCGCAGGATGCGCTCTACCTGTTCCAGGCGCCCTGTTTTTATGGCCTATCGAATAATCGCTTGTATGCGTTCTGCAAATACTCATTGGAGCATAATATAACGTCGGAGAATGTGCTGCAGACACTGGAGGCGTCAGATATTACTAAAATCTATGACATCAAGGATTATgcattgaaattaattgtGAAAGATTTTGCCAAGGTGGCCAGGCTACCAAAGATAGCCGGTTTGTCGCGCGAACTGTTGCTGGAGATAATACGCGCTGTGGCCGATTCGCAAGGCGAGTTTCTGACCCGCATCAATATCAATACCGATATCTGA
- Protein Sequence
- MLKSILGADTNGSAEDIPSGGVGVVVASGSSGGSGSGTSRSAGALSRASYGHGSSSISSGLSAVCGLVGGGSGSGSGSGSASASASGGSTPATVYCPACVANSSQQQQQQQQQQALASGAEAGLARESKSGKRVKARKSASTAGCLDAQHIRNHLRMSTSSSMRSTRGNGAGGSSSSSSTASAVIPSNCSSIAYDSNSNGSCSSFNGKVNSPGSYSCNALNVDFSTYTATHQWSRMLECAEFVGAKRSKHTVVSYKDAMFVFGGDNGKTMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFLSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENHQWEEVEQQGDRPPTCCNFPVAVARDAMYVFSGQSGLQITNSLFEFHFKTRTWRRISNEPVLRGATSAPPSRRYGHTMVHHDRFLYVFGGSADSMLPNDLHCYDLDSQVWSVIQPEQYSDVPSGRVFHASAVISDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFHEKQFCDIQFVVGSEEVRILAHIAFVAARSKYLRNKILSAREALQHQMEKFYGVGQVDALALNTGVGADRTPMLEVRLSHASPEAFDIILNYIYTDRIDLKESYNKNIIILITDIYQLAGLFTMPRLAQGCIQYLDFKINKINVLEALYNADKNNIKIIKDHCMQFIIKDENFTEVVMSSEFSDLDKPLLVEIIRKRLHPSKLVMDTSFESNIGTTLEHDLSMFLETTGRDFCDISLRLDDQVIAAHKSVLSARCTYFQGMFRSFMPPDNTVNIQIGEISPSLEAFHSLLRYIYYGETKMPPQDALYLFQAPCFYGLSNNRLYAFCKYSLEHNITSENVLQTLEASDITKIYDIKDYALKLIVKDFAKVARLPKIAGLSRELLLEIIRAVADSQGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479535;
- 90% Identity
- iTF_00561095;
- 80% Identity
- -